RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 NFKBIEO00221 500 aa18.77■□□□□ 0.59
CDKN1B-201ENST00000228872 SNHG28P0DPA3 235 aa18.77■□□□□ 0.59
CDKN1B-201ENST00000228872 SERPINB4P48594 390 aa18.77■□□□□ 0.59
CDKN1B-201ENST00000228872 SLC34A1Q06495 639 aa18.77■□□□□ 0.59
CDKN1B-201ENST00000228872 SESTD1Q86VW0 696 aa18.77■□□□□ 0.59
CDKN1B-201ENST00000228872 UBN1Q9NPG3 1134 aa18.77■□□□□ 0.59
CDKN1B-201ENST00000228872 IGKV6D-41A0A0C4DH26 115 aa18.76■□□□□ 0.59
CDKN1B-201ENST00000228872 SFI1A8K8P3 1242 aa18.76■□□□□ 0.59
CDKN1B-201ENST00000228872 C2CD2LO14523 706 aa18.76■□□□□ 0.59
CDKN1B-201ENST00000228872 CAPN9O14815 690 aa18.76■□□□□ 0.59
CDKN1B-201ENST00000228872 ENTPD3O75355 529 aa18.76■□□□□ 0.59
CDKN1B-201ENST00000228872 KPNB1Q14974 876 aaKnown RBP18.76■□□□□ 0.59
CDKN1B-201ENST00000228872 ZRSR2Q15696 482 aaKnown RBP18.76■□□□□ 0.59
CDKN1B-201ENST00000228872 CLNKQ7Z7G1 428 aa18.76■□□□□ 0.59
CDKN1B-201ENST00000228872 DTNBP1Q96EV8 351 aa18.76■□□□□ 0.59
CDKN1B-201ENST00000228872 GBP5Q96PP8 586 aa18.76■□□□□ 0.59
CDKN1B-201ENST00000228872 NUP85Q9BW27 656 aa18.76■□□□□ 0.59
CDKN1B-201ENST00000228872 BHMT2Q9H2M3 363 aa18.76■□□□□ 0.59
CDKN1B-201ENST00000228872 OLFML3Q9NRN5 406 aa18.76■□□□□ 0.59
CDKN1B-201ENST00000228872 NUMBLQ9Y6R0 609 aa18.76■□□□□ 0.59
CDKN1B-201ENST00000228872 ATRNL1Q5VV63 1379 aa18.76■□□□□ 0.59
CDKN1B-201ENST00000228872 RFX1P22670 979 aa18.76■□□□□ 0.59
CDKN1B-201ENST00000228872 NMT1P30419 496 aaKnown RBP18.76■□□□□ 0.59
CDKN1B-201ENST00000228872 SHMT1P34896 483 aa18.76■□□□□ 0.59
CDKN1B-201ENST00000228872 ADCY8P40145 1251 aa18.76■□□□□ 0.59
CDKN1B-201ENST00000228872 VPS41P49754 854 aa18.76■□□□□ 0.59
CDKN1B-201ENST00000228872 LRRC23Q53EV4 343 aaPredicted RBP18.76■□□□□ 0.59
CDKN1B-201ENST00000228872 OTOAQ7RTW8 1153 aa18.76■□□□□ 0.59
CDKN1B-201ENST00000228872 MTDHQ86UE4 582 aaKnown RBP18.76■□□□□ 0.59
CDKN1B-201ENST00000228872 ZFPM1Q8IX07 1006 aa18.76■□□□□ 0.59
CDKN1B-201ENST00000228872 ATL2Q8NHH9 583 aa18.76■□□□□ 0.59
CDKN1B-201ENST00000228872 LMO3Q8TAP4 145 aa18.76■□□□□ 0.59
CDKN1B-201ENST00000228872 PTPRN2Q92932 1015 aa18.76■□□□□ 0.59
CDKN1B-201ENST00000228872 AZIN2Q96A70 460 aa18.76■□□□□ 0.59
CDKN1B-201ENST00000228872 PRMT6Q96LA8 375 aaPredicted RBP18.76■□□□□ 0.59
CDKN1B-201ENST00000228872 MBOAT7Q96N66 472 aa18.76■□□□□ 0.59
CDKN1B-201ENST00000228872 DMAP1Q9NPF5 467 aaPredicted RBP18.76■□□□□ 0.59
CDKN1B-201ENST00000228872 PDP2Q9P2J9 529 aa18.76■□□□□ 0.59
CDKN1B-201ENST00000228872 CYP3A7-CYP3A51PA0A087WV96 503 aa18.75■□□□□ 0.59
CDKN1B-201ENST00000228872 USP17L15C9J2P7 530 aa18.75■□□□□ 0.59
CDKN1B-201ENST00000228872 USP17L13C9JLJ4 530 aa18.75■□□□□ 0.59
CDKN1B-201ENST00000228872 USP17L11C9JVI0 530 aa18.75■□□□□ 0.59
CDKN1B-201ENST00000228872 USP17L18D6R9N7 530 aa18.75■□□□□ 0.59
CDKN1B-201ENST00000228872 USP17L22D6RA61 530 aa18.75■□□□□ 0.59
CDKN1B-201ENST00000228872 USP17L17D6RBQ6 530 aa18.75■□□□□ 0.59
CDKN1B-201ENST00000228872 USP17L19D6RCP7 530 aa18.75■□□□□ 0.59
CDKN1B-201ENST00000228872 USP17L20D6RJB6 530 aa18.75■□□□□ 0.59
CDKN1B-201ENST00000228872 EIF3DO15371 548 aaKnown RBP eCLIP18.75■□□□□ 0.59
CDKN1B-201ENST00000228872 PSMG1O95456 288 aa18.75■□□□□ 0.59
CDKN1B-201ENST00000228872 BCRP11274 1271 aa18.75■□□□□ 0.59
CDKN1B-201ENST00000228872 CYP3A7P24462 503 aa18.75■□□□□ 0.59
CDKN1B-201ENST00000228872 CYP2J2P51589 502 aa18.75■□□□□ 0.59
CDKN1B-201ENST00000228872 USP17L24Q0WX57 530 aa18.75■□□□□ 0.59
CDKN1B-201ENST00000228872 AP1B1Q10567 949 aa18.75■□□□□ 0.59
CDKN1B-201ENST00000228872 NR1H3Q13133 447 aa18.75■□□□□ 0.59
CDKN1B-201ENST00000228872 ZC2HC1CQ53FD0 456 aaPredicted RBP18.75■□□□□ 0.59
CDKN1B-201ENST00000228872 USP17L6PQ6QN14 398 aa18.75■□□□□ 0.59
CDKN1B-201ENST00000228872 TRABDQ9H4I3 376 aa18.75■□□□□ 0.59
CDKN1B-201ENST00000228872 TDRD3Q9H7E2 651 aaKnown RBP18.75■□□□□ 0.59
CDKN1B-201ENST00000228872 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.75■□□□□ 0.59
CDKN1B-201ENST00000228872 SPDYE2BA6NHP3 402 aa18.75■□□□□ 0.59
CDKN1B-201ENST00000228872 TBX10O75333 385 aa18.75■□□□□ 0.59
CDKN1B-201ENST00000228872 GAS8O95995 478 aa18.75■□□□□ 0.59
CDKN1B-201ENST00000228872 SPDYE6P0CI01 402 aa18.75■□□□□ 0.59
CDKN1B-201ENST00000228872 GCAP28676 217 aa18.75■□□□□ 0.59
CDKN1B-201ENST00000228872 MAN1A1P33908 653 aa18.75■□□□□ 0.59
CDKN1B-201ENST00000228872 SLC18A1P54219 525 aa18.75■□□□□ 0.59
CDKN1B-201ENST00000228872 CACNB3P54284 484 aa18.75■□□□□ 0.59
CDKN1B-201ENST00000228872 TTBK2Q6IQ55 1244 aa18.75■□□□□ 0.59
CDKN1B-201ENST00000228872 MTMR14Q8NCE2 650 aa18.75■□□□□ 0.59
CDKN1B-201ENST00000228872 ETNPPLQ8TBG4 499 aa18.75■□□□□ 0.59
CDKN1B-201ENST00000228872 UBE2OQ9C0C9 1292 aaKnown RBP18.75■□□□□ 0.59
CDKN1B-201ENST00000228872 UBE2TQ9NPD8 197 aaPredicted RBP18.75■□□□□ 0.59
CDKN1B-201ENST00000228872 PI4KBQ9UBF8 816 aa18.75■□□□□ 0.59
CDKN1B-201ENST00000228872 CCDC22O60826 627 aa18.74■□□□□ 0.59
CDKN1B-201ENST00000228872 ABHD2P08910 425 aa18.74■□□□□ 0.59
CDKN1B-201ENST00000228872 SLURP2P0DP57 97 aa18.74■□□□□ 0.59
CDKN1B-201ENST00000228872 GAP43P17677 238 aa18.74■□□□□ 0.59
CDKN1B-201ENST00000228872 GSTT1P30711 240 aa18.74■□□□□ 0.59
CDKN1B-201ENST00000228872 ZNF543Q08ER8 600 aa18.74■□□□□ 0.59
CDKN1B-201ENST00000228872 RELL1Q8IUW5 271 aa18.74■□□□□ 0.59
CDKN1B-201ENST00000228872 KSR1Q8IVT5 923 aa18.74■□□□□ 0.59
CDKN1B-201ENST00000228872 ARHGEF19Q8IW93 802 aa18.74■□□□□ 0.59
CDKN1B-201ENST00000228872 OGFOD1Q8N543 542 aa18.74■□□□□ 0.59
CDKN1B-201ENST00000228872 PPFIBP2Q8ND30 876 aa18.74■□□□□ 0.59
CDKN1B-201ENST00000228872 GRK7Q8WTQ7 553 aa18.74■□□□□ 0.59
CDKN1B-201ENST00000228872 LBHD1Q9BQE6 289 aaPredicted RBP18.74■□□□□ 0.59
CDKN1B-201ENST00000228872 BTBD10Q9BSF8 475 aa18.74■□□□□ 0.59
CDKN1B-201ENST00000228872 SMG5Q9UPR3 1016 aaKnown RBP18.74■□□□□ 0.59
CDKN1B-201ENST00000228872 BCS1LQ9Y276 419 aa18.74■□□□□ 0.59
CDKN1B-201ENST00000228872 PDLIM1O00151 329 aa18.74■□□□□ 0.59
CDKN1B-201ENST00000228872 EXOC3O60645 756 aa18.74■□□□□ 0.59
CDKN1B-201ENST00000228872 RRM1P23921 792 aa18.74■□□□□ 0.59
CDKN1B-201ENST00000228872 RPA3P35244 121 aaPredicted RBP18.74■□□□□ 0.59
CDKN1B-201ENST00000228872 PSMC4P43686 418 aa18.74■□□□□ 0.59
CDKN1B-201ENST00000228872 CXCL9Q07325 125 aa18.74■□□□□ 0.59
CDKN1B-201ENST00000228872 SLC1A5Q15758 541 aa18.74■□□□□ 0.59
CDKN1B-201ENST00000228872 CYP4F22Q6NT55 531 aa18.74■□□□□ 0.59
CDKN1B-201ENST00000228872 SH3BP5LQ7L8J4 393 aa18.74■□□□□ 0.59
CDKN1B-201ENST00000228872 JDP2Q8WYK2 163 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms