RNA–Protein interactions for RNA: ENST00000227266.9

CTSC-201, Transcript of cathepsin C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSC, Length 1,921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-201ENST00000227266 CCDC150Q8NCX0 1101 aa11.97□□□□□ -0.49
CTSC-201ENST00000227266 NEK11Q8NG66 645 aa11.97□□□□□ -0.49
CTSC-201ENST00000227266 LMO3Q8TAP4 145 aa11.97□□□□□ -0.49
CTSC-201ENST00000227266 HERVK_113Q902F9 699 aa11.97□□□□□ -0.49
CTSC-201ENST00000227266 FAM193BQ96PV7 902 aaPredicted RBP11.97□□□□□ -0.49
CTSC-201ENST00000227266 IMPG2Q9BZV3 1241 aa11.97□□□□□ -0.49
CTSC-201ENST00000227266 KANSL3Q9P2N6 904 aa11.97□□□□□ -0.49
CTSC-201ENST00000227266 LAMA2P24043 3122 aaKnown RBP11.97□□□□□ -0.49
CTSC-201ENST00000227266 EPHB6O15197 1021 aa11.96□□□□□ -0.49
CTSC-201ENST00000227266 DGKIO75912 1065 aa11.96□□□□□ -0.49
CTSC-201ENST00000227266 TUSC3Q13454 348 aa11.96□□□□□ -0.49
CTSC-201ENST00000227266 ZNF699Q32M78 642 aa11.96□□□□□ -0.49
CTSC-201ENST00000227266 C9orf57Q5W0N0 161 aa11.96□□□□□ -0.49
CTSC-201ENST00000227266 SPOPLQ6IQ16 392 aa11.96□□□□□ -0.49
CTSC-201ENST00000227266 GJB7Q6PEY0 223 aa11.96□□□□□ -0.49
CTSC-201ENST00000227266 CXorf38Q8TB03 319 aa11.96□□□□□ -0.49
CTSC-201ENST00000227266 CPLX3Q8WVH0 158 aa11.96□□□□□ -0.49
CTSC-201ENST00000227266 MTIF3Q9H2K0 278 aaKnown RBP11.96□□□□□ -0.49
CTSC-201ENST00000227266 SPTLC3Q9NUV7 552 aa11.96□□□□□ -0.49
CTSC-201ENST00000227266 SLC4A7Q9Y6M7 1214 aa11.96□□□□□ -0.49
CTSC-201ENST00000227266 UQCRHLA0A096LP55 91 aa11.96□□□□□ -0.5
CTSC-201ENST00000227266 PODXLO00592 558 aa11.96□□□□□ -0.5
CTSC-201ENST00000227266 B4GALT3O60512 393 aa11.96□□□□□ -0.5
CTSC-201ENST00000227266 DDHD2O94830 711 aa11.96□□□□□ -0.5
CTSC-201ENST00000227266 UQCRHP07919 91 aa11.96□□□□□ -0.5
CTSC-201ENST00000227266 CLCNKBP51801 687 aa11.96□□□□□ -0.5
CTSC-201ENST00000227266 NOP14P78316 857 aaKnown RBP11.96□□□□□ -0.5
CTSC-201ENST00000227266 SGSM1Q2NKQ1 1148 aa11.96□□□□□ -0.5
CTSC-201ENST00000227266 KLHDC7AQ5VTJ3 777 aa11.96□□□□□ -0.5
CTSC-201ENST00000227266 PPFIBP1Q86W92 1011 aa11.96□□□□□ -0.5
CTSC-201ENST00000227266 HPDLQ96IR7 371 aa11.96□□□□□ -0.5
CTSC-201ENST00000227266 NT5C1BQ96P26 610 aa11.96□□□□□ -0.5
CTSC-201ENST00000227266 YME1L1Q96TA2 773 aa11.96□□□□□ -0.5
CTSC-201ENST00000227266 PAAF1Q9BRP4 392 aa11.96□□□□□ -0.5
CTSC-201ENST00000227266 ZBED2Q9BTP6 218 aa11.96□□□□□ -0.5
CTSC-201ENST00000227266 MRPL9Q9BYD2 267 aaKnown RBP11.96□□□□□ -0.5
CTSC-201ENST00000227266 XYLT2Q9H1B5 865 aa11.96□□□□□ -0.5
CTSC-201ENST00000227266 SIX2Q9NPC8 291 aa11.96□□□□□ -0.5
CTSC-201ENST00000227266 HCSTQ9UBK5 93 aa11.96□□□□□ -0.5
CTSC-201ENST00000227266 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.96□□□□□ -0.5
CTSC-201ENST00000227266 ITIH6Q6UXX5 1313 aa11.95□□□□□ -0.5
CTSC-201ENST00000227266 ANO9A1A5B4 782 aa11.95□□□□□ -0.5
CTSC-201ENST00000227266 H0YGN5 161 aa11.95□□□□□ -0.5
CTSC-201ENST00000227266 ZC3H11AO75152 810 aaKnown RBP eCLIP11.95□□□□□ -0.5
CTSC-201ENST00000227266 NOL4O94818 638 aa11.95□□□□□ -0.5
CTSC-201ENST00000227266 ASS1P00966 412 aaKnown RBP11.95□□□□□ -0.5
CTSC-201ENST00000227266 ATP2A2P16615 1042 aaKnown RBP11.95□□□□□ -0.5
CTSC-201ENST00000227266 LRPAP1P30533 357 aa11.95□□□□□ -0.5
CTSC-201ENST00000227266 POLR2FP61218 127 aaKnown RBP11.95□□□□□ -0.5
CTSC-201ENST00000227266 MYO1EQ12965 1108 aa11.95□□□□□ -0.5
CTSC-201ENST00000227266 WDR72Q3MJ13 1102 aa11.95□□□□□ -0.5
CTSC-201ENST00000227266 C9orf50Q5SZB4 431 aa11.95□□□□□ -0.5
CTSC-201ENST00000227266 PHLDB3Q6NSJ2 640 aa11.95□□□□□ -0.5
CTSC-201ENST00000227266 RRAGAQ7L523 313 aa11.95□□□□□ -0.5
CTSC-201ENST00000227266 ARHGEF19Q8IW93 802 aa11.95□□□□□ -0.5
CTSC-201ENST00000227266 LRRC43Q8N309 656 aa11.95□□□□□ -0.5
CTSC-201ENST00000227266 PPM1KQ8N3J5 372 aa11.95□□□□□ -0.5
CTSC-201ENST00000227266 TATDN2Q93075 761 aa11.95□□□□□ -0.5
CTSC-201ENST00000227266 PKNOX2Q96KN3 472 aa11.95□□□□□ -0.5
CTSC-201ENST00000227266 APOBEC3GQ9HC16 384 aaKnown RBP11.95□□□□□ -0.5
CTSC-201ENST00000227266 UBE2TQ9NPD8 197 aaPredicted RBP11.95□□□□□ -0.5
CTSC-201ENST00000227266 PLCB1Q9NQ66 1216 aa11.95□□□□□ -0.5
CTSC-201ENST00000227266 NXF1Q9UBU9 619 aaKnown RBP11.95□□□□□ -0.5
CTSC-201ENST00000227266 APEX2Q9UBZ4 518 aa11.95□□□□□ -0.5
CTSC-201ENST00000227266 DNAJB4Q9UDY4 337 aa11.95□□□□□ -0.5
CTSC-201ENST00000227266 NUB1Q9Y5A7 615 aa11.95□□□□□ -0.5
CTSC-201ENST00000227266 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.95□□□□□ -0.5
CTSC-201ENST00000227266 TTC3P53804 2025 aa11.95□□□□□ -0.5
CTSC-201ENST00000227266 PIRO00625 290 aa11.94□□□□□ -0.5
CTSC-201ENST00000227266 GJB5O95377 273 aa11.94□□□□□ -0.5
CTSC-201ENST00000227266 UCHL3P15374 230 aa11.94□□□□□ -0.5
CTSC-201ENST00000227266 IGFBP6P24592 240 aaPredicted RBP11.94□□□□□ -0.5
CTSC-201ENST00000227266 ATICP31939 592 aa11.94□□□□□ -0.5
CTSC-201ENST00000227266 RPL9P32969 192 aaKnown RBP11.94□□□□□ -0.5
CTSC-201ENST00000227266 OR1G1P47890 313 aa11.94□□□□□ -0.5
CTSC-201ENST00000227266 DSC1Q08554 894 aa11.94□□□□□ -0.5
CTSC-201ENST00000227266 RAPGEF1Q13905 1077 aa11.94□□□□□ -0.5
CTSC-201ENST00000227266 BTG3Q14201 252 aaPredicted RBP11.94□□□□□ -0.5
CTSC-201ENST00000227266 UPP1Q16831 310 aa11.94□□□□□ -0.5
CTSC-201ENST00000227266 DPY19L2P1Q6NXN4 242 aa11.94□□□□□ -0.5
CTSC-201ENST00000227266 SCARA5Q6ZMJ2 495 aa11.94□□□□□ -0.5
CTSC-201ENST00000227266 CACNA2D4Q7Z3S7 1137 aa11.94□□□□□ -0.5
CTSC-201ENST00000227266 COLGALT2Q8IYK4 626 aa11.94□□□□□ -0.5
CTSC-201ENST00000227266 HASPINQ8TF76 798 aa11.94□□□□□ -0.5
CTSC-201ENST00000227266 DDX27Q96GQ7 796 aaKnown RBP11.94□□□□□ -0.5
CTSC-201ENST00000227266 RNPC3Q96LT9 517 aaKnown RBP11.94□□□□□ -0.5
CTSC-201ENST00000227266 ZNF560Q96MR9 790 aa11.94□□□□□ -0.5
CTSC-201ENST00000227266 GANQ9H2C0 597 aa11.94□□□□□ -0.5
CTSC-201ENST00000227266 NRDE2Q9H7Z3 1164 aa11.94□□□□□ -0.5
CTSC-201ENST00000227266 NLRC4Q9NPP4 1024 aa11.94□□□□□ -0.5
CTSC-201ENST00000227266 PRG3Q9Y2Y8 225 aaPredicted RBP11.94□□□□□ -0.5
CTSC-201ENST00000227266 FHOD1Q9Y613 1164 aa11.94□□□□□ -0.5
CTSC-201ENST00000227266 LTBP2Q14767 1821 aa11.94□□□□□ -0.5
CTSC-201ENST00000227266 B3GAT3O94766 335 aa11.94□□□□□ -0.5
CTSC-201ENST00000227266 GYPCP04921 128 aa11.94□□□□□ -0.5
CTSC-201ENST00000227266 CASP14P31944 242 aa11.94□□□□□ -0.5
CTSC-201ENST00000227266 PNPLA4P41247 253 aa11.94□□□□□ -0.5
CTSC-201ENST00000227266 ARID5BQ14865 1188 aa11.94□□□□□ -0.5
CTSC-201ENST00000227266 SHHQ15465 462 aa11.94□□□□□ -0.5
CTSC-201ENST00000227266 ARHGAP44Q17R89 818 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 153.7 ms