RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 IL18RAPO95256 599 aa13.9□□□□□ -0.18
COL1A1-201ENST00000225964 IMPDH2P12268 514 aa13.9□□□□□ -0.18
COL1A1-201ENST00000225964 CSE1LP55060 971 aaKnown RBP13.9□□□□□ -0.18
COL1A1-201ENST00000225964 HPCAP84074 193 aa13.9□□□□□ -0.18
COL1A1-201ENST00000225964 SKOR1P84550 965 aa13.9□□□□□ -0.18
COL1A1-201ENST00000225964 USP10Q14694 798 aaKnown RBP13.9□□□□□ -0.18
COL1A1-201ENST00000225964 PAN2Q504Q3 1202 aaKnown RBP13.9□□□□□ -0.18
COL1A1-201ENST00000225964 LRRC71Q8N4P6 559 aa13.9□□□□□ -0.18
COL1A1-201ENST00000225964 UBA3Q8TBC4 463 aa13.9□□□□□ -0.18
COL1A1-201ENST00000225964 ADNPQ9H2P0 1102 aa13.9□□□□□ -0.18
COL1A1-201ENST00000225964 CACNA2D2Q9NY47 1150 aa13.9□□□□□ -0.18
COL1A1-201ENST00000225964 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.9□□□□□ -0.18
COL1A1-201ENST00000225964 HDAC6Q9UBN7 1215 aa13.9□□□□□ -0.18
COL1A1-201ENST00000225964 APRTP07741 180 aa13.9□□□□□ -0.19
COL1A1-201ENST00000225964 ZNF556Q9HAH1 456 aa13.9□□□□□ -0.19
COL1A1-201ENST00000225964 AAASQ9NRG9 546 aa13.9□□□□□ -0.19
COL1A1-201ENST00000225964 NOP53Q9NZM5 478 aaKnown RBP13.9□□□□□ -0.19
COL1A1-201ENST00000225964 H2AFY2Q9P0M6 372 aaPredicted RBP13.9□□□□□ -0.19
COL1A1-201ENST00000225964 LAMC1P11047 1609 aa13.89□□□□□ -0.19
COL1A1-201ENST00000225964 NLRP11P59045 1033 aaKnown RBP13.89□□□□□ -0.19
COL1A1-201ENST00000225964 SARM1Q6SZW1 724 aa13.89□□□□□ -0.19
COL1A1-201ENST00000225964 GTF3C2Q8WUA4 911 aaPredicted RBP13.89□□□□□ -0.19
COL1A1-201ENST00000225964 LPAR1Q92633 364 aa13.89□□□□□ -0.19
COL1A1-201ENST00000225964 FAM162AQ96A26 154 aa13.89□□□□□ -0.19
COL1A1-201ENST00000225964 HES6Q96HZ4 224 aa13.89□□□□□ -0.19
COL1A1-201ENST00000225964 L3MBTL3Q96JM7 780 aaPredicted RBP13.89□□□□□ -0.19
COL1A1-201ENST00000225964 MAN1C1Q9NR34 630 aa13.89□□□□□ -0.19
COL1A1-201ENST00000225964 C20orf96Q9NUD7 363 aaPredicted RBP13.89□□□□□ -0.19
COL1A1-201ENST00000225964 ESYT3A0FGR9 886 aa13.89□□□□□ -0.19
COL1A1-201ENST00000225964 C17orf102A2RUQ5 167 aa13.89□□□□□ -0.19
COL1A1-201ENST00000225964 MAFGO15525 162 aa13.89□□□□□ -0.19
COL1A1-201ENST00000225964 SOX11P35716 441 aa13.89□□□□□ -0.19
COL1A1-201ENST00000225964 CRB1P82279 1406 aa13.89□□□□□ -0.19
COL1A1-201ENST00000225964 PRKCEQ02156 737 aa13.89□□□□□ -0.19
COL1A1-201ENST00000225964 STILQ15468 1287 aa13.89□□□□□ -0.19
COL1A1-201ENST00000225964 SGSM1Q2NKQ1 1148 aa13.89□□□□□ -0.19
COL1A1-201ENST00000225964 RFFLQ8WZ73 363 aa13.89□□□□□ -0.19
COL1A1-201ENST00000225964 DTNAQ9Y4J8 743 aa13.89□□□□□ -0.19
COL1A1-201ENST00000225964 FLT1P17948 1338 aa13.89□□□□□ -0.19
COL1A1-201ENST00000225964 CYP2C9P11712 490 aa13.89□□□□□ -0.19
COL1A1-201ENST00000225964 VCAM1P19320 739 aa13.89□□□□□ -0.19
COL1A1-201ENST00000225964 TRADDQ15628 312 aa13.89□□□□□ -0.19
COL1A1-201ENST00000225964 CHMP1BQ7LBR1 199 aa13.89□□□□□ -0.19
COL1A1-201ENST00000225964 SHCBP1Q8NEM2 672 aa13.89□□□□□ -0.19
COL1A1-201ENST00000225964 HPS3Q969F9 1004 aa13.89□□□□□ -0.19
COL1A1-201ENST00000225964 TMA16Q96EY4 203 aaKnown RBP13.89□□□□□ -0.19
COL1A1-201ENST00000225964 DNAJC5Q9H3Z4 198 aa13.89□□□□□ -0.19
COL1A1-201ENST00000225964 ABI2Q9NYB9 513 aaPredicted RBP13.89□□□□□ -0.19
COL1A1-201ENST00000225964 KIAA0391O15091 583 aaKnown RBP13.89□□□□□ -0.19
COL1A1-201ENST00000225964 DGAT1O75907 488 aa13.89□□□□□ -0.19
COL1A1-201ENST00000225964 ALDH1A2O94788 518 aa13.89□□□□□ -0.19
COL1A1-201ENST00000225964 KRT8P05787 483 aa13.89□□□□□ -0.19
COL1A1-201ENST00000225964 LAMB3Q13751 1172 aa13.89□□□□□ -0.19
COL1A1-201ENST00000225964 P3H1Q32P28 736 aa13.89□□□□□ -0.19
COL1A1-201ENST00000225964 SRBD1Q8N5C6 995 aaKnown RBP13.89□□□□□ -0.19
COL1A1-201ENST00000225964 CERKQ8TCT0 537 aa13.89□□□□□ -0.19
COL1A1-201ENST00000225964 TAF1DQ9H5J8 278 aaPredicted RBP13.89□□□□□ -0.19
COL1A1-201ENST00000225964 MAGEB2O15479 319 aa13.89□□□□□ -0.19
COL1A1-201ENST00000225964 IPMKQ8NFU5 416 aa13.89□□□□□ -0.19
COL1A1-201ENST00000225964 ORC4O43929 436 aa13.88□□□□□ -0.19
COL1A1-201ENST00000225964 ENO1P06733 434 aaKnown RBP13.88□□□□□ -0.19
COL1A1-201ENST00000225964 ALDH7A1P49419 539 aaKnown RBP13.88□□□□□ -0.19
COL1A1-201ENST00000225964 INPP5AQ14642 412 aa13.88□□□□□ -0.19
COL1A1-201ENST00000225964 PAWRQ96IZ0 340 aaKnown RBP13.88□□□□□ -0.19
COL1A1-201ENST00000225964 CINPQ9BW66 212 aaPredicted RBP13.88□□□□□ -0.19
COL1A1-201ENST00000225964 TASP1Q9H6P5 420 aa13.88□□□□□ -0.19
COL1A1-201ENST00000225964 NRKQ7Z2Y5 1582 aa13.88□□□□□ -0.19
COL1A1-201ENST00000225964 SLC16A3O15427 465 aaKnown RBP13.88□□□□□ -0.19
COL1A1-201ENST00000225964 ANO5Q75V66 913 aa13.88□□□□□ -0.19
COL1A1-201ENST00000225964 NEDD1Q8NHV4 660 aa13.88□□□□□ -0.19
COL1A1-201ENST00000225964 NAGPAQ9UK23 515 aa13.88□□□□□ -0.19
COL1A1-201ENST00000225964 CCDC22O60826 627 aa13.88□□□□□ -0.19
COL1A1-201ENST00000225964 THPOP40225 353 aa13.88□□□□□ -0.19
COL1A1-201ENST00000225964 FOXO4P98177 505 aa13.88□□□□□ -0.19
COL1A1-201ENST00000225964 DCAF6Q58WW2 860 aa13.88□□□□□ -0.19
COL1A1-201ENST00000225964 ADAM33Q9BZ11 813 aa13.88□□□□□ -0.19
COL1A1-201ENST00000225964 MYOZ2Q9NPC6 264 aa13.88□□□□□ -0.19
COL1A1-201ENST00000225964 KDM1AO60341 852 aa13.88□□□□□ -0.19
COL1A1-201ENST00000225964 GMPSP49915 693 aaPredicted RBP13.88□□□□□ -0.19
COL1A1-201ENST00000225964 PHKG1Q16816 387 aa13.88□□□□□ -0.19
COL1A1-201ENST00000225964 GNASQ5JWF2 1037 aa13.88□□□□□ -0.19
COL1A1-201ENST00000225964 RBBP8NLQ8NC74 664 aaPredicted RBP13.88□□□□□ -0.19
COL1A1-201ENST00000225964 TMEM117Q9H0C3 514 aa13.88□□□□□ -0.19
COL1A1-201ENST00000225964 ZC4H2Q9NQZ6 224 aa13.88□□□□□ -0.19
COL1A1-201ENST00000225964 PSD3Q9NYI0 1048 aa13.88□□□□□ -0.19
COL1A1-201ENST00000225964 DAGLAQ9Y4D2 1042 aa13.88□□□□□ -0.19
COL1A1-201ENST00000225964 PLEKHM3Q6ZWE6 761 aa13.88□□□□□ -0.19
COL1A1-201ENST00000225964 CHSY1Q86X52 802 aa13.88□□□□□ -0.19
COL1A1-201ENST00000225964 SIRT2Q8IXJ6 389 aa13.88□□□□□ -0.19
COL1A1-201ENST00000225964 RFC5P40937 340 aa13.87□□□□□ -0.19
COL1A1-201ENST00000225964 CARSP49589 748 aaKnown RBP13.87□□□□□ -0.19
COL1A1-201ENST00000225964 RCAN1P53805 252 aa13.87□□□□□ -0.19
COL1A1-201ENST00000225964 C6orf10Q5SRN2 563 aa13.87□□□□□ -0.19
COL1A1-201ENST00000225964 C12orf60Q5U649 245 aa13.87□□□□□ -0.19
COL1A1-201ENST00000225964 CDC42EP5Q6NZY7 148 aa13.87□□□□□ -0.19
COL1A1-201ENST00000225964 MYL2P10916 166 aa13.87□□□□□ -0.19
COL1A1-201ENST00000225964 CCDC15Q0P6D6 951 aa13.87□□□□□ -0.19
COL1A1-201ENST00000225964 CDH18Q13634 790 aa13.87□□□□□ -0.19
COL1A1-201ENST00000225964 DHX34Q14147 1143 aaKnown RBP13.87□□□□□ -0.19
COL1A1-201ENST00000225964 ARHGEF26Q96DR7 871 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms