RNA–Protein interactions for RNA: ENST00000003084.10

CFTR-201, Transcript of cystic fibrosis transmembrane conductance regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFTR, Length 6,132 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFTR-201ENST00000003084 ITIH6Q6UXX5 1313 aa4.49□□□□□ -1.69
CFTR-201ENST00000003084 NPHP3-ACAD11A0A0J9YXS1 232 aa4.49□□□□□ -1.69
CFTR-201ENST00000003084 TCRBV5S4A2TA0A5A2 114 aa4.49□□□□□ -1.69
CFTR-201ENST00000003084 MSH4O15457 936 aa4.49□□□□□ -1.69
CFTR-201ENST00000003084 MSCO60682 206 aa4.49□□□□□ -1.69
CFTR-201ENST00000003084 ZRANB2O95218 330 aaKnown RBP eCLIP4.49□□□□□ -1.69
CFTR-201ENST00000003084 FTCDO95954 541 aa4.49□□□□□ -1.69
CFTR-201ENST00000003084 CYP11B2P19099 503 aa4.49□□□□□ -1.69
CFTR-201ENST00000003084 SAT1P21673 171 aa4.49□□□□□ -1.69
CFTR-201ENST00000003084 NMT1P30419 496 aaKnown RBP4.49□□□□□ -1.69
CFTR-201ENST00000003084 CYP2C19P33261 490 aa4.49□□□□□ -1.69
CFTR-201ENST00000003084 ALDH1A3P47895 512 aa4.49□□□□□ -1.69
CFTR-201ENST00000003084 SNRNP35Q16560 246 aaKnown RBP4.49□□□□□ -1.69
CFTR-201ENST00000003084 TDRD10Q5VZ19 366 aaKnown RBP4.49□□□□□ -1.69
CFTR-201ENST00000003084 ATG16L1Q676U5 607 aa4.49□□□□□ -1.69
CFTR-201ENST00000003084 SDE2Q6IQ49 451 aa4.49□□□□□ -1.69
CFTR-201ENST00000003084 WFDC8Q8IUA0 241 aa4.49□□□□□ -1.69
CFTR-201ENST00000003084 ACRBPQ8NEB7 543 aa4.49□□□□□ -1.69
CFTR-201ENST00000003084 ANKS1AQ92625 1134 aa4.49□□□□□ -1.69
CFTR-201ENST00000003084 SPATC1LQ9H0A9 340 aa4.49□□□□□ -1.69
CFTR-201ENST00000003084 FAM96AQ9H5X1 160 aa4.49□□□□□ -1.69
CFTR-201ENST00000003084 KANSL3Q9P2N6 904 aa4.49□□□□□ -1.69
CFTR-201ENST00000003084 APEX2Q9UBZ4 518 aa4.49□□□□□ -1.69
CFTR-201ENST00000003084 ZNF212Q9UDV6 495 aa4.49□□□□□ -1.69
CFTR-201ENST00000003084 CAPN11Q9UMQ6 739 aa4.49□□□□□ -1.69
CFTR-201ENST00000003084 CCDC151A5D8V7 595 aa4.49□□□□□ -1.69
CFTR-201ENST00000003084 GPC4O75487 556 aa4.49□□□□□ -1.69
CFTR-201ENST00000003084 LRG1P02750 347 aa4.49□□□□□ -1.69
CFTR-201ENST00000003084 CTSHP09668 335 aa4.49□□□□□ -1.69
CFTR-201ENST00000003084 LCP1P13796 627 aa4.49□□□□□ -1.69
CFTR-201ENST00000003084 THPOP40225 353 aa4.49□□□□□ -1.69
CFTR-201ENST00000003084 VEGFBP49765 207 aa4.49□□□□□ -1.69
CFTR-201ENST00000003084 HSD17B4P51659 736 aa4.49□□□□□ -1.69
CFTR-201ENST00000003084 NBPF9Q3BBW0 867 aa4.49□□□□□ -1.69
CFTR-201ENST00000003084 CCDC144BQ3MJ40 725 aa4.49□□□□□ -1.69
CFTR-201ENST00000003084 CDK5RAP1Q96SZ6 601 aaKnown RBP4.49□□□□□ -1.69
CFTR-201ENST00000003084 MKRN2Q9H000 416 aaKnown RBP4.49□□□□□ -1.69
CFTR-201ENST00000003084 SPTLC3Q9NUV7 552 aa4.49□□□□□ -1.69
CFTR-201ENST00000003084 IRAK4Q9NWZ3 460 aa4.49□□□□□ -1.69
CFTR-201ENST00000003084 GGT7Q9UJ14 662 aa4.49□□□□□ -1.69
CFTR-201ENST00000003084 CDV3Q9UKY7 258 aaKnown RBP4.49□□□□□ -1.69
CFTR-201ENST00000003084 C19orf67A6NJJ6 358 aa4.49□□□□□ -1.69
CFTR-201ENST00000003084 AKR1A1P14550 325 aa4.49□□□□□ -1.69
CFTR-201ENST00000003084 OAS2P29728 719 aaKnown RBP4.49□□□□□ -1.69
CFTR-201ENST00000003084 DDR1Q08345 913 aa4.49□□□□□ -1.69
CFTR-201ENST00000003084 ADCY2Q08462 1091 aa4.49□□□□□ -1.69
CFTR-201ENST00000003084 FAM102AQ5T9C2 384 aaPredicted RBP4.49□□□□□ -1.69
CFTR-201ENST00000003084 NBPF12Q5TAG4 269 aaPredicted RBP4.49□□□□□ -1.69
CFTR-201ENST00000003084 HEATR6Q6AI08 1181 aaKnown RBP4.49□□□□□ -1.69
CFTR-201ENST00000003084 FRA10AC1Q70Z53 315 aa4.49□□□□□ -1.69
CFTR-201ENST00000003084 ADSSL1Q8N142 457 aa4.49□□□□□ -1.69
CFTR-201ENST00000003084 C11orf70Q9BRQ4 267 aa4.49□□□□□ -1.69
CFTR-201ENST00000003084 NT5C1AQ9BXI3 368 aa4.49□□□□□ -1.69
CFTR-201ENST00000003084 UVRAGQ9P2Y5 699 aa4.49□□□□□ -1.69
CFTR-201ENST00000003084 KIAA1257Q9ULG3 409 aa4.49□□□□□ -1.69
CFTR-201ENST00000003084 TBX20Q9UMR3 447 aa4.49□□□□□ -1.69
CFTR-201ENST00000003084 SH3BP1Q9Y3L3 701 aa4.49□□□□□ -1.69
CFTR-201ENST00000003084 PP2D1A8MPX8 630 aa4.48□□□□□ -1.69
CFTR-201ENST00000003084 POC1B-GALNT4F8VUJ3 575 aa4.48□□□□□ -1.69
CFTR-201ENST00000003084 PRRG1O14668 218 aa4.48□□□□□ -1.69
CFTR-201ENST00000003084 CREB3O43889 395 aa4.48□□□□□ -1.69
CFTR-201ENST00000003084 PALMO75781 387 aa4.48□□□□□ -1.69
CFTR-201ENST00000003084 DDNO94850 711 aaPredicted RBP4.48□□□□□ -1.69
CFTR-201ENST00000003084 CSPG5O95196 566 aa4.48□□□□□ -1.69
CFTR-201ENST00000003084 ADH1CP00326 375 aa4.48□□□□□ -1.69
CFTR-201ENST00000003084 AMHP03971 560 aa4.48□□□□□ -1.69
CFTR-201ENST00000003084 CYP2C8P10632 490 aa4.48□□□□□ -1.69
CFTR-201ENST00000003084 ATICP31939 592 aa4.48□□□□□ -1.69
CFTR-201ENST00000003084 CHRNA3P32297 505 aa4.48□□□□□ -1.69
CFTR-201ENST00000003084 FMO5P49326 533 aa4.48□□□□□ -1.69
CFTR-201ENST00000003084 HERVK_113P62684 666 aa4.48□□□□□ -1.69
CFTR-201ENST00000003084 GABPB1Q06547 395 aaPredicted RBP4.48□□□□□ -1.69
CFTR-201ENST00000003084 EFHC1Q5JVL4 640 aa4.48□□□□□ -1.69
CFTR-201ENST00000003084 NAA35Q5VZE5 725 aa4.48□□□□□ -1.69
CFTR-201ENST00000003084 ANKRD40Q6AI12 368 aa4.48□□□□□ -1.69
CFTR-201ENST00000003084 METTL7BQ6UX53 244 aa4.48□□□□□ -1.69
CFTR-201ENST00000003084 C4orf22Q6V702 233 aa4.48□□□□□ -1.69
CFTR-201ENST00000003084 PASD1Q8IV76 773 aa4.48□□□□□ -1.69
CFTR-201ENST00000003084 DHX40Q8IX18 779 aaKnown RBP4.48□□□□□ -1.69
CFTR-201ENST00000003084 CEP120Q8N960 986 aa4.48□□□□□ -1.69
CFTR-201ENST00000003084 MGARPQ8TDB4 240 aa4.48□□□□□ -1.69
CFTR-201ENST00000003084 PYROXD1Q8WU10 500 aa4.48□□□□□ -1.69
CFTR-201ENST00000003084 KRT35Q92764 455 aa4.48□□□□□ -1.69
CFTR-201ENST00000003084 RIOX1Q9H6W3 641 aa4.48□□□□□ -1.69
CFTR-201ENST00000003084 CATSPERBQ9H7T0 1116 aa4.48□□□□□ -1.69
CFTR-201ENST00000003084 EPB41L5Q9HCM4 733 aa4.48□□□□□ -1.69
CFTR-201ENST00000003084 TRPC7Q9HCX4 862 aa4.48□□□□□ -1.69
CFTR-201ENST00000003084 STARD7Q9NQZ5 370 aa4.48□□□□□ -1.69
CFTR-201ENST00000003084 LILRB5O75023 590 aa4.48□□□□□ -1.69
CFTR-201ENST00000003084 SLC2A3P11169 496 aa4.48□□□□□ -1.69
CFTR-201ENST00000003084 ALDH7A1P49419 539 aaKnown RBP4.48□□□□□ -1.69
CFTR-201ENST00000003084 C2orf54Q08AI8 447 aa4.48□□□□□ -1.69
CFTR-201ENST00000003084 ELAVL2Q12926 359 aaKnown RBP4.48□□□□□ -1.69
CFTR-201ENST00000003084 NME3Q13232 169 aa4.48□□□□□ -1.69
CFTR-201ENST00000003084 TSTA3Q13630 321 aaPredicted RBP4.48□□□□□ -1.69
CFTR-201ENST00000003084 GTF2H3Q13889 308 aa4.48□□□□□ -1.69
CFTR-201ENST00000003084 PIGHQ14442 188 aaPredicted RBP4.48□□□□□ -1.69
CFTR-201ENST00000003084 ZNF394Q53GI3 561 aa4.48□□□□□ -1.69
CFTR-201ENST00000003084 IQSEC1Q6DN90 963 aa4.48□□□□□ -1.69
CFTR-201ENST00000003084 TRAPPC11Q7Z392 1133 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms