RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 MTSS1LQ765P7 747 aa18.28■□□□□ 0.52
PHGDH-213ENST00000641272 ACAP3Q96P50 834 aa18.28■□□□□ 0.52
PHGDH-213ENST00000641272 SLC38A7Q9NVC3 462 aa18.28■□□□□ 0.52
PHGDH-213ENST00000641272 CNTN3Q9P232 1028 aa18.28■□□□□ 0.52
PHGDH-213ENST00000641272 BACE2Q9Y5Z0 518 aa18.28■□□□□ 0.52
PHGDH-213ENST00000641272 FAM186AA6NE01 2351 aa18.27■□□□□ 0.52
PHGDH-213ENST00000641272 RHOP08100 348 aa18.27■□□□□ 0.52
PHGDH-213ENST00000641272 CXCL8P10145 99 aa18.27■□□□□ 0.52
PHGDH-213ENST00000641272 GUCY2CP25092 1073 aa18.27■□□□□ 0.52
PHGDH-213ENST00000641272 GJB2P29033 226 aa18.27■□□□□ 0.52
PHGDH-213ENST00000641272 MCM4P33991 863 aa18.27■□□□□ 0.52
PHGDH-213ENST00000641272 MATR3P43243 847 aaKnown RBP eCLIP18.27■□□□□ 0.52
PHGDH-213ENST00000641272 STRN3Q13033 797 aa18.27■□□□□ 0.52
PHGDH-213ENST00000641272 SNW1Q13573 536 aaKnown RBP18.27■□□□□ 0.52
PHGDH-213ENST00000641272 RABEP1Q15276 862 aa18.27■□□□□ 0.52
PHGDH-213ENST00000641272 ALKAL1Q6UXT8 129 aa18.27■□□□□ 0.52
PHGDH-213ENST00000641272 ADSSL1Q8N142 457 aa18.27■□□□□ 0.52
PHGDH-213ENST00000641272 PJA1Q8NG27 643 aa18.27■□□□□ 0.52
PHGDH-213ENST00000641272 MCRS1Q96EZ8 462 aa18.27■□□□□ 0.52
PHGDH-213ENST00000641272 CDK5RAP3Q96JB5 506 aa18.27■□□□□ 0.52
PHGDH-213ENST00000641272 MRPS23Q9Y3D9 190 aaKnown RBP18.27■□□□□ 0.52
PHGDH-213ENST00000641272 KIF3AQ9Y496 699 aa18.27■□□□□ 0.52
PHGDH-213ENST00000641272 ZFP37Q9Y6Q3 630 aaPredicted RBP18.27■□□□□ 0.52
PHGDH-213ENST00000641272 H3BQV1 296 aa18.26■□□□□ 0.51
PHGDH-213ENST00000641272 PRRG1O14668 218 aa18.26■□□□□ 0.51
PHGDH-213ENST00000641272 LRG1P02750 347 aa18.26■□□□□ 0.51
PHGDH-213ENST00000641272 PLS3P13797 630 aa18.26■□□□□ 0.51
PHGDH-213ENST00000641272 GLULP15104 373 aa18.26■□□□□ 0.51
PHGDH-213ENST00000641272 KCNE1P15382 129 aa18.26■□□□□ 0.51
PHGDH-213ENST00000641272 MLF2Q15773 248 aaPredicted RBP18.26■□□□□ 0.51
PHGDH-213ENST00000641272 RILPL1Q5EBL4 403 aa18.26■□□□□ 0.51
PHGDH-213ENST00000641272 PHLDB3Q6NSJ2 640 aa18.26■□□□□ 0.51
PHGDH-213ENST00000641272 TMEM161BQ8NDZ6 487 aa18.26■□□□□ 0.51
PHGDH-213ENST00000641272 BICD1Q96G01 975 aa18.26■□□□□ 0.51
PHGDH-213ENST00000641272 TMX3Q96JJ7 454 aa18.26■□□□□ 0.51
PHGDH-213ENST00000641272 CORO1BQ9BR76 489 aa18.26■□□□□ 0.51
PHGDH-213ENST00000641272 CYP4F11Q9HBI6 524 aa18.26■□□□□ 0.51
PHGDH-213ENST00000641272 DLGAP2Q9P1A6 1054 aa18.26■□□□□ 0.51
PHGDH-213ENST00000641272 FBXL5Q9UKA1 691 aa18.26■□□□□ 0.51
PHGDH-213ENST00000641272 SIT1Q9Y3P8 196 aa18.26■□□□□ 0.51
PHGDH-213ENST00000641272 RBM19Q9Y4C8 960 aaKnown RBP18.26■□□□□ 0.51
PHGDH-213ENST00000641272 TSC2P49815 1807 aa18.26■□□□□ 0.51
PHGDH-213ENST00000641272 RIF1Q5UIP0 2472 aaKnown RBP18.25■□□□□ 0.51
PHGDH-213ENST00000641272 NRG2O14511 850 aaPredicted RBP18.25■□□□□ 0.51
PHGDH-213ENST00000641272 SEC24AO95486 1093 aa18.25■□□□□ 0.51
PHGDH-213ENST00000641272 POU2F2P09086 479 aa18.25■□□□□ 0.51
PHGDH-213ENST00000641272 PLA2G4BP0C869 781 aa18.25■□□□□ 0.51
PHGDH-213ENST00000641272 MAPTP10636 758 aaKnown RBP18.25■□□□□ 0.51
PHGDH-213ENST00000641272 ELF1P32519 619 aa18.25■□□□□ 0.51
PHGDH-213ENST00000641272 UBXN2BQ14CS0 331 aa18.25■□□□□ 0.51
PHGDH-213ENST00000641272 UVSSAQ2YD98 709 aa18.25■□□□□ 0.51
PHGDH-213ENST00000641272 CTXN3Q4LDR2 81 aa18.25■□□□□ 0.51
PHGDH-213ENST00000641272 HYIQ5T013 277 aa18.25■□□□□ 0.51
PHGDH-213ENST00000641272 SLC8B1Q6J4K2 584 aa18.25■□□□□ 0.51
PHGDH-213ENST00000641272 POTEHQ6S545 545 aa18.25■□□□□ 0.51
PHGDH-213ENST00000641272 KCNG4Q8TDN1 519 aa18.25■□□□□ 0.51
PHGDH-213ENST00000641272 TCEAL4Q96EI5 215 aa18.25■□□□□ 0.51
PHGDH-213ENST00000641272 HAPLN2Q9GZV7 340 aa18.25■□□□□ 0.51
PHGDH-213ENST00000641272 INSL5Q9Y5Q6 135 aa18.25■□□□□ 0.51
PHGDH-213ENST00000641272 TOM1L1O75674 476 aa18.24■□□□□ 0.51
PHGDH-213ENST00000641272 CD72P21854 359 aa18.24■□□□□ 0.51
PHGDH-213ENST00000641272 TNFSF9P41273 254 aa18.24■□□□□ 0.51
PHGDH-213ENST00000641272 GUCY2FP51841 1108 aa18.24■□□□□ 0.51
PHGDH-213ENST00000641272 SLC12A3P55017 1021 aa18.24■□□□□ 0.51
PHGDH-213ENST00000641272 DHX8Q14562 1220 aaKnown RBP18.24■□□□□ 0.51
PHGDH-213ENST00000641272 SLC10A6Q3KNW5 377 aa18.24■□□□□ 0.51
PHGDH-213ENST00000641272 TMEM119Q4V9L6 283 aa18.24■□□□□ 0.51
PHGDH-213ENST00000641272 ZNF280DQ6N043 979 aa18.24■□□□□ 0.51
PHGDH-213ENST00000641272 SYT2Q8N9I0 419 aaPredicted RBP18.24■□□□□ 0.51
PHGDH-213ENST00000641272 LRRC15Q8TF66 581 aa18.24■□□□□ 0.51
PHGDH-213ENST00000641272 SPIRE2Q8WWL2 714 aa18.24■□□□□ 0.51
PHGDH-213ENST00000641272 TBC1D32Q96NH3 1257 aa18.24■□□□□ 0.51
PHGDH-213ENST00000641272 TIPINQ9BVW5 301 aa18.24■□□□□ 0.51
PHGDH-213ENST00000641272 PLA2G2FQ9BZM2 168 aa18.24■□□□□ 0.51
PHGDH-213ENST00000641272 C17orf75Q9HAS0 396 aa18.24■□□□□ 0.51
PHGDH-213ENST00000641272 KCNH3Q9ULD8 1083 aa18.24■□□□□ 0.51
PHGDH-213ENST00000641272 PTPRZ1P23471 2315 aaPredicted RBP18.24■□□□□ 0.51
PHGDH-213ENST00000641272 ANK1P16157 1881 aa18.24■□□□□ 0.51
PHGDH-213ENST00000641272 COL4A2P08572 1712 aa18.23■□□□□ 0.51
PHGDH-213ENST00000641272 TICRRQ7Z2Z1 1910 aa18.23■□□□□ 0.51
PHGDH-213ENST00000641272 FANCMQ8IYD8 2048 aa18.23■□□□□ 0.51
PHGDH-213ENST00000641272 ARHGEF37A1IGU5 675 aa18.23■□□□□ 0.51
PHGDH-213ENST00000641272 SYN3O14994 580 aa18.23■□□□□ 0.51
PHGDH-213ENST00000641272 CPB1P15086 417 aa18.23■□□□□ 0.51
PHGDH-213ENST00000641272 SMTNP53814 917 aa18.23■□□□□ 0.51
PHGDH-213ENST00000641272 GRM2Q14416 872 aa18.23■□□□□ 0.51
PHGDH-213ENST00000641272 ZBTB41Q5SVQ8 909 aa18.23■□□□□ 0.51
PHGDH-213ENST00000641272 TPRG1Q6ZUI0 275 aa18.23■□□□□ 0.51
PHGDH-213ENST00000641272 ZNF461Q8TAF7 563 aa18.23■□□□□ 0.51
PHGDH-213ENST00000641272 DDX12PQ92771 950 aa18.23■□□□□ 0.51
PHGDH-213ENST00000641272 KIF12Q96FN5 646 aa18.23■□□□□ 0.51
PHGDH-213ENST00000641272 SUSD3Q96L08 255 aa18.23■□□□□ 0.51
PHGDH-213ENST00000641272 REEP2Q9BRK0 252 aa18.23■□□□□ 0.51
PHGDH-213ENST00000641272 MTF2Q9Y483 593 aaPredicted RBP18.23■□□□□ 0.51
PHGDH-213ENST00000641272 TIMM13Q9Y5L4 95 aaPredicted RBP18.23■□□□□ 0.51
PHGDH-213ENST00000641272 KANSL1LA0AUZ9 987 aa18.22■□□□□ 0.51
PHGDH-213ENST00000641272 H7C4K7 107 aa18.22■□□□□ 0.51
PHGDH-213ENST00000641272 K7ENM7 598 aa18.22■□□□□ 0.51
PHGDH-213ENST00000641272 ABLIM3O94929 683 aa18.22■□□□□ 0.51
PHGDH-213ENST00000641272 CCR2P41597 374 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms