RNA–Protein interactions for RNA: ENST00000639487.1

RTTN-215, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 3,175 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-215ENST00000639487 PDGFCQ9NRA1 345 aa7.07□□□□□ -1.28
RTTN-215ENST00000639487 NFKBIL1Q9UBC1 381 aaPredicted RBP7.07□□□□□ -1.28
RTTN-215ENST00000639487 CDY2AQ9Y6F7 541 aa7.07□□□□□ -1.28
RTTN-215ENST00000639487 CCNT1O60563 726 aaKnown RBP7.06□□□□□ -1.28
RTTN-215ENST00000639487 BMPR1AP36894 532 aa7.06□□□□□ -1.28
RTTN-215ENST00000639487 RPS9P46781 194 aaKnown RBP7.06□□□□□ -1.28
RTTN-215ENST00000639487 SUOXP51687 545 aa7.06□□□□□ -1.28
RTTN-215ENST00000639487 RING1Q06587 406 aa7.06□□□□□ -1.28
RTTN-215ENST00000639487 CYP24A1Q07973 514 aa7.06□□□□□ -1.28
RTTN-215ENST00000639487 INF2Q27J81 1249 aa7.06□□□□□ -1.28
RTTN-215ENST00000639487 TRIM60Q495X7 471 aa7.06□□□□□ -1.28
RTTN-215ENST00000639487 HABP4Q5JVS0 413 aaKnown RBP7.06□□□□□ -1.28
RTTN-215ENST00000639487 VSTM1Q6UX27 236 aa7.06□□□□□ -1.28
RTTN-215ENST00000639487 CCDC83Q8IWF9 413 aa7.06□□□□□ -1.28
RTTN-215ENST00000639487 CASP10Q92851 521 aa7.06□□□□□ -1.28
RTTN-215ENST00000639487 MYCBPQ99417 103 aaPredicted RBP7.06□□□□□ -1.28
RTTN-215ENST00000639487 FAM83CQ9BQN1 747 aa7.06□□□□□ -1.28
RTTN-215ENST00000639487 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.06□□□□□ -1.28
RTTN-215ENST00000639487 MARCKSP29966 332 aaPredicted RBP7.06□□□□□ -1.28
RTTN-215ENST00000639487 NUDT1P36639 197 aa7.06□□□□□ -1.28
RTTN-215ENST00000639487 SMC1AQ14683 1233 aaKnown RBP7.06□□□□□ -1.28
RTTN-215ENST00000639487 HS1BP3Q53T59 392 aa7.06□□□□□ -1.28
RTTN-215ENST00000639487 ALG1LQ6GMV1 187 aa7.06□□□□□ -1.28
RTTN-215ENST00000639487 C7orf31Q8N865 590 aa7.06□□□□□ -1.28
RTTN-215ENST00000639487 KIAA0895Q8NCT3 520 aa7.06□□□□□ -1.28
RTTN-215ENST00000639487 PDZD8Q8NEN9 1154 aa7.06□□□□□ -1.28
RTTN-215ENST00000639487 SNRNP27Q8WVK2 155 aaKnown RBP7.06□□□□□ -1.28
RTTN-215ENST00000639487 SCFD1Q8WVM8 642 aa7.06□□□□□ -1.28
RTTN-215ENST00000639487 SLC7A3Q8WY07 619 aa7.06□□□□□ -1.28
RTTN-215ENST00000639487 TGS1Q96RS0 853 aaKnown RBP7.06□□□□□ -1.28
RTTN-215ENST00000639487 AIPL1Q9NZN9 384 aa7.06□□□□□ -1.28
RTTN-215ENST00000639487 IMPACTQ9P2X3 320 aa7.06□□□□□ -1.28
RTTN-215ENST00000639487 AMACRQ9UHK6 382 aa7.06□□□□□ -1.28
RTTN-215ENST00000639487 FAN1Q9Y2M0 1017 aa7.06□□□□□ -1.28
RTTN-215ENST00000639487 MYMKA6NI61 221 aa7.06□□□□□ -1.28
RTTN-215ENST00000639487 SMTNP53814 917 aa7.06□□□□□ -1.28
RTTN-215ENST00000639487 CCT2P78371 535 aaKnown RBP7.06□□□□□ -1.28
RTTN-215ENST00000639487 TRIM32Q13049 653 aa7.06□□□□□ -1.28
RTTN-215ENST00000639487 DMP1Q13316 513 aaPredicted RBP7.06□□□□□ -1.28
RTTN-215ENST00000639487 NOLC1Q14978 699 aaKnown RBP eCLIP7.06□□□□□ -1.28
RTTN-215ENST00000639487 CCDC183Q5T5S1 534 aa7.06□□□□□ -1.28
RTTN-215ENST00000639487 PIK3AP1Q6ZUJ8 805 aa7.06□□□□□ -1.28
RTTN-215ENST00000639487 DDX42Q86XP3 938 aaKnown RBP eCLIP7.06□□□□□ -1.28
RTTN-215ENST00000639487 GPD1LQ8N335 351 aa7.06□□□□□ -1.28
RTTN-215ENST00000639487 RUBCNQ92622 972 aa7.06□□□□□ -1.28
RTTN-215ENST00000639487 CENPIQ92674 756 aaPredicted RBP7.06□□□□□ -1.28
RTTN-215ENST00000639487 SYMPKQ92797 1274 aaKnown RBP7.06□□□□□ -1.28
RTTN-215ENST00000639487 GPKOWQ92917 476 aaPredicted RBP eCLIP7.06□□□□□ -1.28
RTTN-215ENST00000639487 PHKBQ93100 1093 aa7.06□□□□□ -1.28
RTTN-215ENST00000639487 ITFG2Q969R8 447 aa7.06□□□□□ -1.28
RTTN-215ENST00000639487 RCOR3Q9P2K3 495 aaPredicted RBP7.06□□□□□ -1.28
RTTN-215ENST00000639487 CDH9Q9ULB4 789 aa7.06□□□□□ -1.28
RTTN-215ENST00000639487 A0A1B0GTH6 734 aa7.05□□□□□ -1.28
RTTN-215ENST00000639487 PI4K2BG5E9Z4 385 aa7.05□□□□□ -1.28
RTTN-215ENST00000639487 FOXD2O60548 495 aaPredicted RBP7.05□□□□□ -1.28
RTTN-215ENST00000639487 KIF4AO95239 1232 aa7.05□□□□□ -1.28
RTTN-215ENST00000639487 FGBP02675 491 aa7.05□□□□□ -1.28
RTTN-215ENST00000639487 PFKFB1P16118 471 aa7.05□□□□□ -1.28
RTTN-215ENST00000639487 PLCG1P19174 1290 aa7.05□□□□□ -1.28
RTTN-215ENST00000639487 PLA2G4AP47712 749 aa7.05□□□□□ -1.28
RTTN-215ENST00000639487 HCAR3P49019 387 aa7.05□□□□□ -1.28
RTTN-215ENST00000639487 NDUFV1P49821 464 aa7.05□□□□□ -1.28
RTTN-215ENST00000639487 SLC7A9P82251 487 aa7.05□□□□□ -1.28
RTTN-215ENST00000639487 SETDB1Q15047 1291 aa7.05□□□□□ -1.28
RTTN-215ENST00000639487 UBE2SQ16763 222 aa7.05□□□□□ -1.28
RTTN-215ENST00000639487 PTPROQ16827 1216 aa7.05□□□□□ -1.28
RTTN-215ENST00000639487 CLLU1OSQ5K130 101 aa7.05□□□□□ -1.28
RTTN-215ENST00000639487 ZNF618Q5T7W0 954 aa7.05□□□□□ -1.28
RTTN-215ENST00000639487 TTC39BQ5VTQ0 682 aaPredicted RBP7.05□□□□□ -1.28
RTTN-215ENST00000639487 CACTINQ8WUQ7 758 aaKnown RBP7.05□□□□□ -1.28
RTTN-215ENST00000639487 GBP4Q96PP9 640 aa7.05□□□□□ -1.28
RTTN-215ENST00000639487 NUP58Q9BVL2 599 aa7.05□□□□□ -1.28
RTTN-215ENST00000639487 FRMD8P1Q9BZ68 369 aaPredicted RBP7.05□□□□□ -1.28
RTTN-215ENST00000639487 HAPLN2Q9GZV7 340 aa7.05□□□□□ -1.28
RTTN-215ENST00000639487 PRMT8Q9NR22 394 aaPredicted RBP7.05□□□□□ -1.28
RTTN-215ENST00000639487 FAM105AQ9NUU6 356 aa7.05□□□□□ -1.28
RTTN-215ENST00000639487 GABBR1Q9UBS5 961 aa7.05□□□□□ -1.28
RTTN-215ENST00000639487 EFR3BQ9Y2G0 817 aa7.05□□□□□ -1.28
RTTN-215ENST00000639487 TSPAN11A1L157 253 aa7.05□□□□□ -1.28
RTTN-215ENST00000639487 ARNTLO00327 626 aa7.05□□□□□ -1.28
RTTN-215ENST00000639487 ASS1P00966 412 aaKnown RBP7.05□□□□□ -1.28
RTTN-215ENST00000639487 CYP2C18P33260 490 aa7.05□□□□□ -1.28
RTTN-215ENST00000639487 LHX1P48742 406 aa7.05□□□□□ -1.28
RTTN-215ENST00000639487 HERC4Q5GLZ8 1057 aaPredicted RBP7.05□□□□□ -1.28
RTTN-215ENST00000639487 AFMIDQ63HM1 303 aa7.05□□□□□ -1.28
RTTN-215ENST00000639487 CCDC186Q7Z3E2 898 aa7.05□□□□□ -1.28
RTTN-215ENST00000639487 WNT8BQ93098 351 aa7.05□□□□□ -1.28
RTTN-215ENST00000639487 IFT74Q96LB3 600 aa7.05□□□□□ -1.28
RTTN-215ENST00000639487 REEP2Q9BRK0 252 aa7.05□□□□□ -1.28
RTTN-215ENST00000639487 HIPK3Q9H422 1215 aa7.05□□□□□ -1.28
RTTN-215ENST00000639487 CLIC5Q9NZA1 410 aa7.05□□□□□ -1.28
RTTN-215ENST00000639487 KIAA1468Q9P260 1216 aa7.05□□□□□ -1.28
RTTN-215ENST00000639487 BIN2Q9UBW5 565 aaPredicted RBP7.05□□□□□ -1.28
RTTN-215ENST00000639487 CLIC4Q9Y696 253 aa7.05□□□□□ -1.28
RTTN-215ENST00000639487 CDK2AP1O14519 115 aa7.04□□□□□ -1.28
RTTN-215ENST00000639487 PTGESO14684 152 aa7.04□□□□□ -1.28
RTTN-215ENST00000639487 FAM155BO75949 473 aa7.04□□□□□ -1.28
RTTN-215ENST00000639487 SRGAP2BP0DMP2 458 aa7.04□□□□□ -1.28
RTTN-215ENST00000639487 RPL13P26373 211 aaKnown RBP7.04□□□□□ -1.28
RTTN-215ENST00000639487 ADSSP30520 456 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms