RNA–Protein interactions for RNA: ENST00000638567.1

SCARB2-210, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 4,415 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-210ENST00000638567 TMEM119Q4V9L6 283 aa17.58■□□□□ 0.41
SCARB2-210ENST00000638567 ZNF720Q7Z2F6 126 aa17.58■□□□□ 0.41
SCARB2-210ENST00000638567 DTX3LQ8TDB6 740 aa17.58■□□□□ 0.41
SCARB2-210ENST00000638567 UBN1Q9NPG3 1134 aa17.58■□□□□ 0.41
SCARB2-210ENST00000638567 SPATA31A5Q5VU36 1347 aa17.58■□□□□ 0.41
SCARB2-210ENST00000638567 SPATA31A7Q8IWB4 1347 aa17.58■□□□□ 0.41
SCARB2-210ENST00000638567 HMGCS2P54868 508 aa17.58■□□□□ 0.41
SCARB2-210ENST00000638567 AMPD2Q01433 879 aa17.58■□□□□ 0.41
SCARB2-210ENST00000638567 CATSPER4Q7RTX7 472 aa17.58■□□□□ 0.41
SCARB2-210ENST00000638567 A0A0A6YYK5 440 aaPredicted RBP17.58■□□□□ 0.4
SCARB2-210ENST00000638567 PIK3R2O00459 728 aa17.58■□□□□ 0.4
SCARB2-210ENST00000638567 SCTRP47872 440 aa17.58■□□□□ 0.4
SCARB2-210ENST00000638567 PLCB4Q15147 1175 aa17.58■□□□□ 0.4
SCARB2-210ENST00000638567 JADE1Q6IE81 842 aa17.58■□□□□ 0.4
SCARB2-210ENST00000638567 IRF2BP1Q8IU81 584 aa17.58■□□□□ 0.4
SCARB2-210ENST00000638567 CYP4F11Q9HBI6 524 aa17.58■□□□□ 0.4
SCARB2-210ENST00000638567 NOD2Q9HC29 1040 aa17.58■□□□□ 0.4
SCARB2-210ENST00000638567 PSMC3IPQ9P2W1 217 aaPredicted RBP17.58■□□□□ 0.4
SCARB2-210ENST00000638567 DDX3XO00571 662 aaKnown RBP eCLIP17.58■□□□□ 0.43e-14■■■■■ 29.4
SCARB2-210ENST00000638567 TAP1Q03518 808 aa17.58■□□□□ 0.4
SCARB2-210ENST00000638567 FUT2Q10981 343 aa17.58■□□□□ 0.4
SCARB2-210ENST00000638567 DHX35Q9H5Z1 703 aaKnown RBP17.58■□□□□ 0.4
SCARB2-210ENST00000638567 TRAF3IP3Q9Y228 551 aa17.58■□□□□ 0.4
SCARB2-210ENST00000638567 STX1BP61266 288 aa17.57■□□□□ 0.4
SCARB2-210ENST00000638567 HEATR6Q6AI08 1181 aaKnown RBP17.57■□□□□ 0.4
SCARB2-210ENST00000638567 ACAD10Q6JQN1 1059 aa17.57■□□□□ 0.4
SCARB2-210ENST00000638567 SERPINB12Q96P63 405 aa17.57■□□□□ 0.4
SCARB2-210ENST00000638567 ZNF844Q08AG5 666 aa17.57■□□□□ 0.4
SCARB2-210ENST00000638567 THOC5Q13769 683 aaKnown RBP17.57■□□□□ 0.4
SCARB2-210ENST00000638567 CCDC124Q96CT7 223 aaKnown RBP17.57■□□□□ 0.4
SCARB2-210ENST00000638567 FBXO40Q9UH90 709 aa17.57■□□□□ 0.4
SCARB2-210ENST00000638567 MID2Q9UJV3 735 aa17.57■□□□□ 0.4
SCARB2-210ENST00000638567 APRTP07741 180 aa17.57■□□□□ 0.4
SCARB2-210ENST00000638567 PTENP60484 403 aa17.57■□□□□ 0.4
SCARB2-210ENST00000638567 CCNA1P78396 465 aa17.57■□□□□ 0.4
SCARB2-210ENST00000638567 MTMR9Q96QG7 549 aa17.57■□□□□ 0.4
SCARB2-210ENST00000638567 SERPINI1Q99574 410 aa17.57■□□□□ 0.4
SCARB2-210ENST00000638567 CDC42EP4Q9H3Q1 356 aaKnown RBP17.57■□□□□ 0.4
SCARB2-210ENST00000638567 RAB6BQ9NRW1 208 aa17.57■□□□□ 0.4
SCARB2-210ENST00000638567 SLC5A4Q9NY91 659 aa17.57■□□□□ 0.4
SCARB2-210ENST00000638567 CHMP2BQ9UQN3 213 aa17.57■□□□□ 0.4
SCARB2-210ENST00000638567 WDR46O15213 610 aaKnown RBP17.56■□□□□ 0.4
SCARB2-210ENST00000638567 PHKA2P46019 1235 aa17.56■□□□□ 0.4
SCARB2-210ENST00000638567 KDSRQ06136 332 aa17.56■□□□□ 0.4
SCARB2-210ENST00000638567 VPS72Q15906 364 aa17.56■□□□□ 0.4
SCARB2-210ENST00000638567 C3orf62Q6ZUJ4 267 aa17.56■□□□□ 0.4
SCARB2-210ENST00000638567 ARMCX2Q7L311 632 aa17.56■□□□□ 0.4
SCARB2-210ENST00000638567 PACS2Q86VP3 889 aa17.56■□□□□ 0.4
SCARB2-210ENST00000638567 C3orf20Q8ND61 904 aa17.56■□□□□ 0.4
SCARB2-210ENST00000638567 ACSF2Q96CM8 615 aaPredicted RBP17.56■□□□□ 0.4
SCARB2-210ENST00000638567 TSSK1BQ9BXA7 367 aa17.56■□□□□ 0.4
SCARB2-210ENST00000638567 TBX20Q9UMR3 447 aa17.56■□□□□ 0.4
SCARB2-210ENST00000638567 GTPBP10A4D1E9 387 aaKnown RBP17.56■□□□□ 0.4
SCARB2-210ENST00000638567 POLRMTO00411 1230 aaKnown RBP17.56■□□□□ 0.4
SCARB2-210ENST00000638567 CYP11B1P15538 503 aa17.56■□□□□ 0.4
SCARB2-210ENST00000638567 PGM1P36871 562 aa17.56■□□□□ 0.4
SCARB2-210ENST00000638567 STAT5BP51692 787 aa17.56■□□□□ 0.4
SCARB2-210ENST00000638567 SMTNL2Q2TAL5 461 aa17.56■□□□□ 0.4
SCARB2-210ENST00000638567 LRRC55Q6ZSA7 311 aa17.56■□□□□ 0.4
SCARB2-210ENST00000638567 LONP2Q86WA8 852 aa17.56■□□□□ 0.4
SCARB2-210ENST00000638567 AGGF1Q8N302 714 aaeCLIP17.56■□□□□ 0.4
SCARB2-210ENST00000638567 TARS2Q9BW92 718 aaKnown RBP17.56■□□□□ 0.4
SCARB2-210ENST00000638567 FOXP3Q9BZS1 431 aa17.56■□□□□ 0.4
SCARB2-210ENST00000638567 HSD3B7Q9H2F3 369 aa17.56■□□□□ 0.4
SCARB2-210ENST00000638567 OLFML3Q9NRN5 406 aa17.56■□□□□ 0.4
SCARB2-210ENST00000638567 MARCOQ9UEW3 520 aaPredicted RBP17.56■□□□□ 0.4
SCARB2-210ENST00000638567 GOLGA8QA0A0J9YX86 632 aa17.56■□□□□ 0.4
SCARB2-210ENST00000638567 GOLGA8OA6NCC3 632 aa17.56■□□□□ 0.4
SCARB2-210ENST00000638567 DDTLA6NHG4 134 aaPredicted RBP17.56■□□□□ 0.4
SCARB2-210ENST00000638567 GOLGA8NF8WBI6 632 aa17.56■□□□□ 0.4
SCARB2-210ENST00000638567 CST8O60676 142 aa17.56■□□□□ 0.4
SCARB2-210ENST00000638567 FDX1P10109 184 aa17.56■□□□□ 0.4
SCARB2-210ENST00000638567 PRKCEQ02156 737 aa17.56■□□□□ 0.4
SCARB2-210ENST00000638567 ST13P4Q8IZP2 240 aaPredicted RBP17.56■□□□□ 0.4
SCARB2-210ENST00000638567 FAM151AQ8WW52 585 aa17.56■□□□□ 0.4
SCARB2-210ENST00000638567 FAM129AQ9BZQ8 928 aa17.56■□□□□ 0.4
SCARB2-210ENST00000638567 C2orf40Q9H1Z8 148 aa17.56■□□□□ 0.4
SCARB2-210ENST00000638567 GDF3Q9NR23 364 aa17.56■□□□□ 0.4
SCARB2-210ENST00000638567 ZNF70Q9UC06 446 aaPredicted RBP17.56■□□□□ 0.4
SCARB2-210ENST00000638567 AP3M2P53677 418 aa17.56■□□□□ 0.4
SCARB2-210ENST00000638567 RPS6P62753 249 aaKnown RBP17.56■□□□□ 0.4
SCARB2-210ENST00000638567 TMC3Q7Z5M5 1100 aa17.56■□□□□ 0.4
SCARB2-210ENST00000638567 DDX20Q9UHI6 824 aaKnown RBP17.56■□□□□ 0.4
SCARB2-210ENST00000638567 FAF1Q9UNN5 650 aaPredicted RBP17.56■□□□□ 0.4
SCARB2-210ENST00000638567 INPP5FQ9Y2H2 1132 aa17.56■□□□□ 0.4
SCARB2-210ENST00000638567 PCDHGC5Q9Y5F6 944 aa17.56■□□□□ 0.4
SCARB2-210ENST00000638567 KIAA0391O15091 583 aaKnown RBP17.55■□□□□ 0.4
SCARB2-210ENST00000638567 LVRNQ6Q4G3 990 aa17.55■□□□□ 0.4
SCARB2-210ENST00000638567 POP1Q99575 1024 aaKnown RBP17.55■□□□□ 0.4
SCARB2-210ENST00000638567 TMEM39BQ9GZU3 492 aa17.55■□□□□ 0.4
SCARB2-210ENST00000638567 GZMAP12544 262 aa17.55■□□□□ 0.4
SCARB2-210ENST00000638567 CENPCQ03188 943 aa17.55■□□□□ 0.4
SCARB2-210ENST00000638567 TTMPQ5BVD1 217 aa17.55■□□□□ 0.4
SCARB2-210ENST00000638567 MDH1BQ5I0G3 518 aa17.55■□□□□ 0.4
SCARB2-210ENST00000638567 LPAR1Q92633 364 aa17.55■□□□□ 0.4
SCARB2-210ENST00000638567 NDE1Q9NXR1 346 aa17.55■□□□□ 0.4
SCARB2-210ENST00000638567 KCNN4O15554 427 aa17.55■□□□□ 0.4
SCARB2-210ENST00000638567 WEE2P0C1S8 567 aa17.55■□□□□ 0.4
SCARB2-210ENST00000638567 RBP3P10745 1247 aa17.55■□□□□ 0.4
SCARB2-210ENST00000638567 RRM1P23921 792 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 156.5 ms