RNA–Protein interactions for RNA: ENST00000621708.4

PCDH15-233, Transcript of protocadherin related 15, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PCDH15, Length 5,700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-233ENST00000621708 GRIN1Q05586 938 aa9.25□□□□□ -0.93
PCDH15-233ENST00000621708 LMBRD2Q68DH5 695 aaPredicted RBP9.25□□□□□ -0.93
PCDH15-233ENST00000621708 OTOP1Q7RTM1 612 aa9.25□□□□□ -0.93
PCDH15-233ENST00000621708 PPCSQ9HAB8 311 aa9.25□□□□□ -0.93
PCDH15-233ENST00000621708 PCDHB8Q9UN66 801 aa9.25□□□□□ -0.93
PCDH15-233ENST00000621708 ONECUT3O60422 494 aaPredicted RBP9.25□□□□□ -0.93
PCDH15-233ENST00000621708 KLRC1P26715 233 aa9.25□□□□□ -0.93
PCDH15-233ENST00000621708 GALCP54803 685 aa9.25□□□□□ -0.93
PCDH15-233ENST00000621708 CDH6P55285 790 aa9.25□□□□□ -0.93
PCDH15-233ENST00000621708 ELAVL2Q12926 359 aaKnown RBP9.25□□□□□ -0.93
PCDH15-233ENST00000621708 ATG16L1Q676U5 607 aa9.25□□□□□ -0.93
PCDH15-233ENST00000621708 SLC30A10Q6XR72 485 aa9.25□□□□□ -0.93
PCDH15-233ENST00000621708 POLIQ9UNA4 740 aa9.25□□□□□ -0.93
PCDH15-233ENST00000621708 AFDNP55196 1824 aaKnown RBP9.25□□□□□ -0.93
PCDH15-233ENST00000621708 H3BRB1 525 aa9.25□□□□□ -0.93
PCDH15-233ENST00000621708 TFRCP02786 760 aaKnown RBP9.25□□□□□ -0.93
PCDH15-233ENST00000621708 KRT17Q04695 432 aa9.25□□□□□ -0.93
PCDH15-233ENST00000621708 CHADLQ6NUI6 762 aa9.25□□□□□ -0.93
PCDH15-233ENST00000621708 TTI2Q6NXR4 508 aa9.25□□□□□ -0.93
PCDH15-233ENST00000621708 ATL2Q8NHH9 583 aa9.25□□□□□ -0.93
PCDH15-233ENST00000621708 ZNF507Q8TCN5 953 aa9.25□□□□□ -0.93
PCDH15-233ENST00000621708 TUT1Q9H6E5 874 aaKnown RBP9.25□□□□□ -0.93
PCDH15-233ENST00000621708 BFARQ9NZS9 450 aa9.25□□□□□ -0.93
PCDH15-233ENST00000621708 KANSL3Q9P2N6 904 aa9.25□□□□□ -0.93
PCDH15-233ENST00000621708 SNX12Q9UMY4 172 aa9.25□□□□□ -0.93
PCDH15-233ENST00000621708 MTSS1O43312 755 aa9.25□□□□□ -0.93
PCDH15-233ENST00000621708 GPC4O75487 556 aa9.25□□□□□ -0.93
PCDH15-233ENST00000621708 VDRP11473 427 aa9.25□□□□□ -0.93
PCDH15-233ENST00000621708 LCP1P13796 627 aa9.25□□□□□ -0.93
PCDH15-233ENST00000621708 PAX3P23760 479 aa9.25□□□□□ -0.93
PCDH15-233ENST00000621708 GNL1P36915 607 aaPredicted RBP9.25□□□□□ -0.93
PCDH15-233ENST00000621708 THPOP40225 353 aa9.25□□□□□ -0.93
PCDH15-233ENST00000621708 TPI1P60174 286 aa9.25□□□□□ -0.93
PCDH15-233ENST00000621708 MTA1Q13330 715 aa9.25□□□□□ -0.93
PCDH15-233ENST00000621708 NT5DC1Q5TFE4 455 aa9.25□□□□□ -0.93
PCDH15-233ENST00000621708 RNF25Q96BH1 459 aaPredicted RBP9.25□□□□□ -0.93
PCDH15-233ENST00000621708 CFAP36Q96G28 342 aa9.25□□□□□ -0.93
PCDH15-233ENST00000621708 SAYSD1Q9NPB0 183 aa9.25□□□□□ -0.93
PCDH15-233ENST00000621708 CREB3O43889 395 aa9.24□□□□□ -0.93
PCDH15-233ENST00000621708 SLC2A3P11169 496 aa9.24□□□□□ -0.93
PCDH15-233ENST00000621708 ADORA2AP29274 412 aa9.24□□□□□ -0.93
PCDH15-233ENST00000621708 STX1BP61266 288 aa9.24□□□□□ -0.93
PCDH15-233ENST00000621708 TTC31Q49AM3 519 aaPredicted RBP9.24□□□□□ -0.93
PCDH15-233ENST00000621708 PCSK1NQ9UHG2 260 aa9.24□□□□□ -0.93
PCDH15-233ENST00000621708 GTF3C4Q9UKN8 822 aa9.24□□□□□ -0.93
PCDH15-233ENST00000621708 ITGA11Q9UKX5 1188 aa9.24□□□□□ -0.93
PCDH15-233ENST00000621708 TRAF3IP3Q9Y228 551 aa9.24□□□□□ -0.93
PCDH15-233ENST00000621708 A0A087WUV0 522 aaPredicted RBP9.24□□□□□ -0.93
PCDH15-233ENST00000621708 EGFRP00533 1210 aa9.24□□□□□ -0.93
PCDH15-233ENST00000621708 PDGFRAP16234 1089 aa9.24□□□□□ -0.93
PCDH15-233ENST00000621708 REPS2Q8NFH8 660 aa9.24□□□□□ -0.93
PCDH15-233ENST00000621708 UHMK1Q8TAS1 419 aaKnown RBP9.24□□□□□ -0.93
PCDH15-233ENST00000621708 ARHGEF2Q92974 986 aaKnown RBP9.24□□□□□ -0.93
PCDH15-233ENST00000621708 CAMKK2Q96RR4 588 aa9.24□□□□□ -0.93
PCDH15-233ENST00000621708 MRFAP1Q9Y605 127 aa9.24□□□□□ -0.93
PCDH15-233ENST00000621708 LSM8O95777 96 aaKnown RBP9.24□□□□□ -0.93
PCDH15-233ENST00000621708 KRT14P02533 472 aa9.24□□□□□ -0.93
PCDH15-233ENST00000621708 FAM200BP0CF97 657 aa9.24□□□□□ -0.93
PCDH15-233ENST00000621708 RARRES1P49788 294 aa9.24□□□□□ -0.93
PCDH15-233ENST00000621708 PTF1AQ7RTS3 328 aa9.24□□□□□ -0.93
PCDH15-233ENST00000621708 ZFPM1Q8IX07 1006 aa9.24□□□□□ -0.93
PCDH15-233ENST00000621708 TC2NQ8N9U0 490 aa9.24□□□□□ -0.93
PCDH15-233ENST00000621708 SLC35G2Q8TBE7 412 aa9.24□□□□□ -0.93
PCDH15-233ENST00000621708 SKA2Q8WVK7 121 aaPredicted RBP9.24□□□□□ -0.93
PCDH15-233ENST00000621708 HDAC11Q96DB2 347 aa9.24□□□□□ -0.93
PCDH15-233ENST00000621708 RNPC3Q96LT9 517 aaKnown RBP9.24□□□□□ -0.93
PCDH15-233ENST00000621708 A1CFQ9NQ94 594 aaKnown RBP9.24□□□□□ -0.93
PCDH15-233ENST00000621708 HEY1Q9Y5J3 304 aa9.24□□□□□ -0.93
PCDH15-233ENST00000621708 FAM237AA0A1B0GTK4 181 aa9.24□□□□□ -0.93
PCDH15-233ENST00000621708 SLC9A1P19634 815 aa9.24□□□□□ -0.93
PCDH15-233ENST00000621708 SAT1P21673 171 aa9.24□□□□□ -0.93
PCDH15-233ENST00000621708 NME3Q13232 169 aa9.24□□□□□ -0.93
PCDH15-233ENST00000621708 CASP8Q14790 479 aa9.24□□□□□ -0.93
PCDH15-233ENST00000621708 P3H1Q32P28 736 aa9.24□□□□□ -0.93
PCDH15-233ENST00000621708 TRIM59Q8IWR1 403 aa9.24□□□□□ -0.93
PCDH15-233ENST00000621708 ATP11CQ8NB49 1132 aa9.24□□□□□ -0.93
PCDH15-233ENST00000621708 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.24□□□□□ -0.93
PCDH15-233ENST00000621708 ASAP3Q8TDY4 903 aa9.24□□□□□ -0.93
PCDH15-233ENST00000621708 SH2D3AQ9BRG2 576 aa9.24□□□□□ -0.93
PCDH15-233ENST00000621708 TAF1DQ9H5J8 278 aaPredicted RBP9.24□□□□□ -0.93
PCDH15-233ENST00000621708 RSAD1Q9HA92 442 aa9.24□□□□□ -0.93
PCDH15-233ENST00000621708 KCPQ6ZWJ8 1503 aa9.24□□□□□ -0.93
PCDH15-233ENST00000621708 GPD1P21695 349 aa9.24□□□□□ -0.93
PCDH15-233ENST00000621708 CCZ1BP86790 482 aa9.24□□□□□ -0.93
PCDH15-233ENST00000621708 CCZ1P86791 482 aaPredicted RBP9.24□□□□□ -0.93
PCDH15-233ENST00000621708 CYP24A1Q07973 514 aa9.24□□□□□ -0.93
PCDH15-233ENST00000621708 TRIP13Q15645 432 aaPredicted RBP9.24□□□□□ -0.93
PCDH15-233ENST00000621708 GRIK4Q16099 956 aa9.24□□□□□ -0.93
PCDH15-233ENST00000621708 CC2D1AQ6P1N0 951 aaPredicted RBP9.24□□□□□ -0.93
PCDH15-233ENST00000621708 CCDC197Q8NCU1 140 aa9.24□□□□□ -0.93
PCDH15-233ENST00000621708 MTMR9Q96QG7 549 aa9.24□□□□□ -0.93
PCDH15-233ENST00000621708 ASB7Q9H672 318 aa9.24□□□□□ -0.93
PCDH15-233ENST00000621708 CATSPERBQ9H7T0 1116 aa9.24□□□□□ -0.93
PCDH15-233ENST00000621708 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.24□□□□□ -0.93
PCDH15-233ENST00000621708 CASZ1Q86V15 1759 aa9.24□□□□□ -0.93
PCDH15-233ENST00000621708 SETSIPP0DME0 302 aa9.23□□□□□ -0.93
PCDH15-233ENST00000621708 CENPCQ03188 943 aa9.23□□□□□ -0.93
PCDH15-233ENST00000621708 LAMTOR4Q0VGL1 99 aa9.23□□□□□ -0.93
PCDH15-233ENST00000621708 SH2D4BQ5SQS7 431 aa9.23□□□□□ -0.93
PCDH15-233ENST00000621708 ACAD10Q6JQN1 1059 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms