RNA–Protein interactions for RNA: ENST00000581835.1

PPP4R1-220, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 379 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-220ENST00000581835 C7orf25Q9BPX7 421 aa11.18□□□□□ -0.62
PPP4R1-220ENST00000581835 CLSTN3Q9BQT9 956 aa11.18□□□□□ -0.62
PPP4R1-220ENST00000581835 FGFBP2Q9BYJ0 223 aa11.18□□□□□ -0.62
PPP4R1-220ENST00000581835 RPF1Q9H9Y2 349 aaKnown RBP11.18□□□□□ -0.62
PPP4R1-220ENST00000581835 MAGEF1Q9HAY2 307 aa11.18□□□□□ -0.62
PPP4R1-220ENST00000581835 TUBGCP4Q9UGJ1 667 aa11.18□□□□□ -0.62
PPP4R1-220ENST00000581835 CDH22Q9UJ99 828 aa11.18□□□□□ -0.62
PPP4R1-220ENST00000581835 KCNH3Q9ULD8 1083 aa11.18□□□□□ -0.62
PPP4R1-220ENST00000581835 EXOC7Q9UPT5 735 aa11.18□□□□□ -0.62
PPP4R1-220ENST00000581835 LOC730098B7Z3J9 87 aa11.17□□□□□ -0.62
PPP4R1-220ENST00000581835 TGM5O43548 720 aa11.17□□□□□ -0.62
PPP4R1-220ENST00000581835 TRAPPC3O43617 180 aa11.17□□□□□ -0.62
PPP4R1-220ENST00000581835 GLUD1P00367 558 aa11.17□□□□□ -0.62
PPP4R1-220ENST00000581835 C1RP00736 705 aa11.17□□□□□ -0.62
PPP4R1-220ENST00000581835 CYP3A5P20815 502 aa11.17□□□□□ -0.62
PPP4R1-220ENST00000581835 CMA1P23946 247 aa11.17□□□□□ -0.62
PPP4R1-220ENST00000581835 CASP1P29466 404 aa11.17□□□□□ -0.62
PPP4R1-220ENST00000581835 LRPAP1P30533 357 aa11.17□□□□□ -0.62
PPP4R1-220ENST00000581835 BRCC3P46736 316 aa11.17□□□□□ -0.62
PPP4R1-220ENST00000581835 CREMQ03060 361 aa11.17□□□□□ -0.62
PPP4R1-220ENST00000581835 PPP2R3AQ06190 1150 aa11.17□□□□□ -0.62
PPP4R1-220ENST00000581835 POSTNQ15063 836 aa11.17□□□□□ -0.62
PPP4R1-220ENST00000581835 PALB2Q86YC2 1186 aa11.17□□□□□ -0.62
PPP4R1-220ENST00000581835 GLYCTKQ8IVS8 523 aa11.17□□□□□ -0.62
PPP4R1-220ENST00000581835 CD302Q8IX05 232 aa11.17□□□□□ -0.62
PPP4R1-220ENST00000581835 TMEM130Q8N3G9 435 aa11.17□□□□□ -0.62
PPP4R1-220ENST00000581835 GLIS3Q8NEA6 775 aa11.17□□□□□ -0.62
PPP4R1-220ENST00000581835 FEZF2Q8TBJ5 459 aa11.17□□□□□ -0.62
PPP4R1-220ENST00000581835 POMGNT1Q8WZA1 660 aa11.17□□□□□ -0.62
PPP4R1-220ENST00000581835 HPS3Q969F9 1004 aa11.17□□□□□ -0.62
PPP4R1-220ENST00000581835 KIF12Q96FN5 646 aa11.17□□□□□ -0.62
PPP4R1-220ENST00000581835 TSPAN18Q96SJ8 248 aa11.17□□□□□ -0.62
PPP4R1-220ENST00000581835 PYM1Q9BRP8 204 aaKnown RBP11.17□□□□□ -0.62
PPP4R1-220ENST00000581835 SFXN1Q9H9B4 322 aa11.17□□□□□ -0.62
PPP4R1-220ENST00000581835 MAN1C1Q9NR34 630 aa11.17□□□□□ -0.62
PPP4R1-220ENST00000581835 AGO2Q9UKV8 859 aaKnown RBP11.17□□□□□ -0.62
PPP4R1-220ENST00000581835 UBQLN1Q9UMX0 589 aaKnown RBP11.17□□□□□ -0.62
PPP4R1-220ENST00000581835 DENND4AQ7Z401 1863 aa11.17□□□□□ -0.62
PPP4R1-220ENST00000581835 A0A1B0GVL5 298 aa11.16□□□□□ -0.62
PPP4R1-220ENST00000581835 PI4K2BG5E9Z4 385 aa11.16□□□□□ -0.62
PPP4R1-220ENST00000581835 I3L4J1 428 aa11.16□□□□□ -0.62
PPP4R1-220ENST00000581835 PRPF6O94906 941 aaKnown RBP11.16□□□□□ -0.62
PPP4R1-220ENST00000581835 WEE2P0C1S8 567 aa11.16□□□□□ -0.62
PPP4R1-220ENST00000581835 SPATA31D3P0C874 917 aa11.16□□□□□ -0.62
PPP4R1-220ENST00000581835 PFKFB1P16118 471 aa11.16□□□□□ -0.62
PPP4R1-220ENST00000581835 TKTP29401 623 aaKnown RBP11.16□□□□□ -0.62
PPP4R1-220ENST00000581835 MTHFRP42898 656 aa11.16□□□□□ -0.62
PPP4R1-220ENST00000581835 ASIC1P78348 528 aa11.16□□□□□ -0.62
PPP4R1-220ENST00000581835 POU5F1Q01860 360 aaKnown RBP11.16□□□□□ -0.62
PPP4R1-220ENST00000581835 EHHADHQ08426 723 aa11.16□□□□□ -0.62
PPP4R1-220ENST00000581835 PSMD5Q16401 504 aa11.16□□□□□ -0.62
PPP4R1-220ENST00000581835 ATAT1Q5SQI0 421 aa11.16□□□□□ -0.62
PPP4R1-220ENST00000581835 PDXDC1Q6P996 788 aa11.16□□□□□ -0.62
PPP4R1-220ENST00000581835 CRELD2Q6UXH1 353 aaPredicted RBP11.16□□□□□ -0.62
PPP4R1-220ENST00000581835 TMC5Q6UXY8 1006 aa11.16□□□□□ -0.62
PPP4R1-220ENST00000581835 SPATA31D4Q6ZUB0 917 aa11.16□□□□□ -0.62
PPP4R1-220ENST00000581835 UNC13DQ70J99 1090 aa11.16□□□□□ -0.62
PPP4R1-220ENST00000581835 GPR149Q86SP6 731 aa11.16□□□□□ -0.62
PPP4R1-220ENST00000581835 HDAC7Q8WUI4 952 aa11.16□□□□□ -0.62
PPP4R1-220ENST00000581835 FAM212AQ96EL1 285 aa11.16□□□□□ -0.62
PPP4R1-220ENST00000581835 RPGRIP1Q96KN7 1286 aa11.16□□□□□ -0.62
PPP4R1-220ENST00000581835 RIPOR3Q96MK2 946 aa11.16□□□□□ -0.62
PPP4R1-220ENST00000581835 NECTIN4Q96NY8 510 aa11.16□□□□□ -0.62
PPP4R1-220ENST00000581835 SCAND2PQ9GZW5 306 aaPredicted RBP11.16□□□□□ -0.62
PPP4R1-220ENST00000581835 BLZF1Q9H2G9 400 aa11.16□□□□□ -0.62
PPP4R1-220ENST00000581835 PLEKHA4Q9H4M7 779 aa11.16□□□□□ -0.62
PPP4R1-220ENST00000581835 POMKQ9H5K3 350 aa11.16□□□□□ -0.62
PPP4R1-220ENST00000581835 EPHX3Q9H6B9 360 aa11.16□□□□□ -0.62
PPP4R1-220ENST00000581835 TMEM206Q9H813 350 aa11.16□□□□□ -0.62
PPP4R1-220ENST00000581835 DPP7Q9UHL4 492 aa11.16□□□□□ -0.62
PPP4R1-220ENST00000581835 SERTAD1Q9UHV2 236 aa11.16□□□□□ -0.62
PPP4R1-220ENST00000581835 HPSEQ9Y251 543 aa11.16□□□□□ -0.62
PPP4R1-220ENST00000581835 DOCK8Q8NF50 2099 aa11.16□□□□□ -0.62
PPP4R1-220ENST00000581835 CCDC195A0A1B0GUA6 201 aa11.15□□□□□ -0.62
PPP4R1-220ENST00000581835 SPDYE4A6NLX3 237 aa11.15□□□□□ -0.62
PPP4R1-220ENST00000581835 SYN3O14994 580 aa11.15□□□□□ -0.62
PPP4R1-220ENST00000581835 ADAM12O43184 909 aa11.15□□□□□ -0.62
PPP4R1-220ENST00000581835 XPOTO43592 962 aaKnown RBP11.15□□□□□ -0.62
PPP4R1-220ENST00000581835 ACTN4O43707 911 aaKnown RBP11.15□□□□□ -0.62
PPP4R1-220ENST00000581835 SLFN14P0C7P3 912 aa11.15□□□□□ -0.62
PPP4R1-220ENST00000581835 GARTP22102 1010 aa11.15□□□□□ -0.62
PPP4R1-220ENST00000581835 AFMP43652 599 aa11.15□□□□□ -0.62
PPP4R1-220ENST00000581835 GUCY2FP51841 1108 aa11.15□□□□□ -0.62
PPP4R1-220ENST00000581835 CUL4BQ13620 913 aa11.15□□□□□ -0.62
PPP4R1-220ENST00000581835 FAM26FQ5R3K3 315 aa11.15□□□□□ -0.62
PPP4R1-220ENST00000581835 SPATA1Q5VX52 437 aa11.15□□□□□ -0.62
PPP4R1-220ENST00000581835 JADE1Q6IE81 842 aa11.15□□□□□ -0.62
PPP4R1-220ENST00000581835 ELMSAN1Q6PJG2 1045 aa11.15□□□□□ -0.62
PPP4R1-220ENST00000581835 RSPO2Q6UXX9 243 aaPredicted RBP11.15□□□□□ -0.62
PPP4R1-220ENST00000581835 C15orf39Q6ZRI6 1047 aa11.15□□□□□ -0.62
PPP4R1-220ENST00000581835 ANKS3Q6ZW76 656 aa11.15□□□□□ -0.62
PPP4R1-220ENST00000581835 STXBP4Q6ZWJ1 553 aa11.15□□□□□ -0.62
PPP4R1-220ENST00000581835 EPM2AIP1Q7L775 607 aaPredicted RBP11.15□□□□□ -0.62
PPP4R1-220ENST00000581835 CEP57L1Q8IYX8 460 aa11.15□□□□□ -0.62
PPP4R1-220ENST00000581835 SYCP3Q8IZU3 236 aa11.15□□□□□ -0.62
PPP4R1-220ENST00000581835 CMASQ8NFW8 434 aaPredicted RBP11.15□□□□□ -0.62
PPP4R1-220ENST00000581835 ZNF507Q8TCN5 953 aa11.15□□□□□ -0.62
PPP4R1-220ENST00000581835 SUSD3Q96L08 255 aa11.15□□□□□ -0.62
PPP4R1-220ENST00000581835 ASB7Q9H672 318 aa11.15□□□□□ -0.62
PPP4R1-220ENST00000581835 MTRRQ9UBK8 725 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms