RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 MSX1P28360 303 aa5.77□□□□□ -1.49
VAPA-203ENST00000577539 SF3A3Q12874 501 aaKnown RBP eCLIP5.77□□□□□ -1.49
VAPA-203ENST00000577539 RNF187Q5TA31 235 aaPredicted RBP5.77□□□□□ -1.49
VAPA-203ENST00000577539 C1orf186Q6ZWK4 172 aa5.77□□□□□ -1.49
VAPA-203ENST00000577539 ZNF572Q7Z3I7 529 aaPredicted RBP5.77□□□□□ -1.49
VAPA-203ENST00000577539 LINC00528Q8N1L1 170 aa5.77□□□□□ -1.49
VAPA-203ENST00000577539 OR13H1Q8NG92 308 aa5.77□□□□□ -1.49
VAPA-203ENST00000577539 SLC35G2Q8TBE7 412 aa5.77□□□□□ -1.49
VAPA-203ENST00000577539 LRRC45Q96CN5 670 aa5.77□□□□□ -1.49
VAPA-203ENST00000577539 C8orf48Q96LL4 319 aa5.77□□□□□ -1.49
VAPA-203ENST00000577539 TUFT1Q9NNX1 390 aa5.77□□□□□ -1.49
VAPA-203ENST00000577539 LARSQ9P2J5 1176 aaKnown RBP5.77□□□□□ -1.49
VAPA-203ENST00000577539 MYH7BA7E2Y1 1941 aa5.76□□□□□ -1.49
VAPA-203ENST00000577539 LTBP4Q8N2S1 1624 aa5.76□□□□□ -1.49
VAPA-203ENST00000577539 IGLV3-22A0A075B6J6 115 aa5.76□□□□□ -1.49
VAPA-203ENST00000577539 GOLGA6L10A0A0M3HER8 536 aa5.76□□□□□ -1.49
VAPA-203ENST00000577539 ZNF233A6NK53 670 aa5.76□□□□□ -1.49
VAPA-203ENST00000577539 TULP2O00295 520 aa5.76□□□□□ -1.49
VAPA-203ENST00000577539 EIF3HO15372 352 aaKnown RBP eCLIP5.76□□□□□ -1.49
VAPA-203ENST00000577539 XYLBO75191 536 aa5.76□□□□□ -1.49
VAPA-203ENST00000577539 FBXO24O75426 580 aa5.76□□□□□ -1.49
VAPA-203ENST00000577539 ERLIN2O94905 339 aa5.76□□□□□ -1.49
VAPA-203ENST00000577539 MYZAPP0CAP1 466 aa5.76□□□□□ -1.49
VAPA-203ENST00000577539 WDR4P57081 412 aaKnown RBP5.76□□□□□ -1.49
VAPA-203ENST00000577539 ZNF720Q7Z2F6 126 aa5.76□□□□□ -1.49
VAPA-203ENST00000577539 FBXO27Q8NI29 283 aa5.76□□□□□ -1.49
VAPA-203ENST00000577539 UHMK1Q8TAS1 419 aaKnown RBP5.76□□□□□ -1.49
VAPA-203ENST00000577539 LNX1Q8TBB1 728 aaPredicted RBP5.76□□□□□ -1.49
VAPA-203ENST00000577539 CRYGNQ8WXF5 182 aa5.76□□□□□ -1.49
VAPA-203ENST00000577539 RUBCNQ92622 972 aa5.76□□□□□ -1.49
VAPA-203ENST00000577539 SCYL1Q96KG9 808 aa5.76□□□□□ -1.49
VAPA-203ENST00000577539 TRIM51Q9BSJ1 452 aa5.76□□□□□ -1.49
VAPA-203ENST00000577539 STK33Q9BYT3 514 aa5.76□□□□□ -1.49
VAPA-203ENST00000577539 GLIS2Q9BZE0 524 aaPredicted RBP5.76□□□□□ -1.49
VAPA-203ENST00000577539 TMEM39BQ9GZU3 492 aa5.76□□□□□ -1.49
VAPA-203ENST00000577539 TNKS2Q9H2K2 1166 aa5.76□□□□□ -1.49
VAPA-203ENST00000577539 SIX2Q9NPC8 291 aa5.76□□□□□ -1.49
VAPA-203ENST00000577539 OLFML3Q9NRN5 406 aa5.76□□□□□ -1.49
VAPA-203ENST00000577539 TMOD4Q9NZQ9 345 aa5.76□□□□□ -1.49
VAPA-203ENST00000577539 UTP11Q9Y3A2 253 aaKnown RBP5.76□□□□□ -1.49
VAPA-203ENST00000577539 EMSYQ7Z589 1322 aa5.76□□□□□ -1.49
VAPA-203ENST00000577539 TMEM150BA6NC51 233 aa5.76□□□□□ -1.49
VAPA-203ENST00000577539 F8VZ95 297 aa5.76□□□□□ -1.49
VAPA-203ENST00000577539 FOXN3O00409 490 aaPredicted RBP5.76□□□□□ -1.49
VAPA-203ENST00000577539 PSMD10O75832 226 aa5.76□□□□□ -1.49
VAPA-203ENST00000577539 EIF2AK2P19525 551 aaKnown RBP5.76□□□□□ -1.49
VAPA-203ENST00000577539 MESDQ14696 234 aa5.76□□□□□ -1.49
VAPA-203ENST00000577539 KRT71Q3SY84 523 aa5.76□□□□□ -1.49
VAPA-203ENST00000577539 NSMFQ6X4W1 530 aa5.76□□□□□ -1.49
VAPA-203ENST00000577539 AGMOQ6ZNB7 445 aa5.76□□□□□ -1.49
VAPA-203ENST00000577539 PPM1KQ8N3J5 372 aa5.76□□□□□ -1.49
VAPA-203ENST00000577539 CEP120Q8N960 986 aa5.76□□□□□ -1.49
VAPA-203ENST00000577539 CEP89Q96ST8 783 aa5.76□□□□□ -1.49
VAPA-203ENST00000577539 TAS2R14Q9NYV8 317 aa5.76□□□□□ -1.49
VAPA-203ENST00000577539 WRAP73Q9P2S5 460 aaPredicted RBP5.76□□□□□ -1.49
VAPA-203ENST00000577539 FBXL5Q9UKA1 691 aa5.76□□□□□ -1.49
VAPA-203ENST00000577539 ATP8A1Q9Y2Q0 1164 aa5.76□□□□□ -1.49
VAPA-203ENST00000577539 CCDC189A1A4V9 331 aa5.76□□□□□ -1.49
VAPA-203ENST00000577539 E7EVH7 732 aa5.76□□□□□ -1.49
VAPA-203ENST00000577539 EIF3DO15371 548 aaKnown RBP eCLIP5.76□□□□□ -1.49
VAPA-203ENST00000577539 SH3BP5O60239 455 aa5.76□□□□□ -1.49
VAPA-203ENST00000577539 RPS6KA5O75582 802 aa5.76□□□□□ -1.49
VAPA-203ENST00000577539 CYP3A4P08684 503 aa5.76□□□□□ -1.49
VAPA-203ENST00000577539 BCRP11274 1271 aa5.76□□□□□ -1.49
VAPA-203ENST00000577539 PRKCIP41743 596 aa5.76□□□□□ -1.49
VAPA-203ENST00000577539 SEC24CP53992 1094 aa5.76□□□□□ -1.49
VAPA-203ENST00000577539 BFSP1Q12934 665 aa5.76□□□□□ -1.49
VAPA-203ENST00000577539 TTC31Q49AM3 519 aaPredicted RBP5.76□□□□□ -1.49
VAPA-203ENST00000577539 LRRC69Q6ZNQ3 347 aa5.76□□□□□ -1.49
VAPA-203ENST00000577539 PALB2Q86YC2 1186 aa5.76□□□□□ -1.49
VAPA-203ENST00000577539 IQCKQ8N0W5 287 aa5.76□□□□□ -1.49
VAPA-203ENST00000577539 SLC20A1Q8WUM9 679 aa5.76□□□□□ -1.49
VAPA-203ENST00000577539 RFFLQ8WZ73 363 aa5.76□□□□□ -1.49
VAPA-203ENST00000577539 ELMO3Q96BJ8 720 aa5.76□□□□□ -1.49
VAPA-203ENST00000577539 ARHGEF26Q96DR7 871 aa5.76□□□□□ -1.49
VAPA-203ENST00000577539 THAP2Q9H0W7 228 aa5.76□□□□□ -1.49
VAPA-203ENST00000577539 ISCUQ9H1K1 167 aa5.76□□□□□ -1.49
VAPA-203ENST00000577539 KANSL3Q9P2N6 904 aa5.76□□□□□ -1.49
VAPA-203ENST00000577539 APEX2Q9UBZ4 518 aa5.76□□□□□ -1.49
VAPA-203ENST00000577539 ZNF70Q9UC06 446 aaPredicted RBP5.76□□□□□ -1.49
VAPA-203ENST00000577539 HERC5Q9UII4 1024 aaKnown RBP5.76□□□□□ -1.49
VAPA-203ENST00000577539 PPP1R9AQ9ULJ8 1098 aa5.76□□□□□ -1.49
VAPA-203ENST00000577539 TMX2Q9Y320 296 aa5.76□□□□□ -1.49
VAPA-203ENST00000577539 FAM169AQ9Y6X4 670 aa5.76□□□□□ -1.49
VAPA-203ENST00000577539 SBF2Q86WG5 1849 aa5.75□□□□□ -1.49
VAPA-203ENST00000577539 UPK3BL1B0FP48 263 aa5.75□□□□□ -1.49
VAPA-203ENST00000577539 UPK3BL2E5RIL1 263 aa5.75□□□□□ -1.49
VAPA-203ENST00000577539 CCDC188H7C350 402 aa5.75□□□□□ -1.49
VAPA-203ENST00000577539 SLC16A4O15374 487 aa5.75□□□□□ -1.49
VAPA-203ENST00000577539 FTLP02792 175 aaPredicted RBP5.75□□□□□ -1.49
VAPA-203ENST00000577539 HSD17B3P37058 310 aa5.75□□□□□ -1.49
VAPA-203ENST00000577539 PEX3P56589 373 aa5.75□□□□□ -1.49
VAPA-203ENST00000577539 DLG4P78352 724 aa5.75□□□□□ -1.49
VAPA-203ENST00000577539 BMT2Q1RMZ1 405 aa5.75□□□□□ -1.49
VAPA-203ENST00000577539 TKFCQ3LXA3 575 aa5.75□□□□□ -1.49
VAPA-203ENST00000577539 XKR9Q5GH70 373 aa5.75□□□□□ -1.49
VAPA-203ENST00000577539 FAM102BQ5T8I3 360 aa5.75□□□□□ -1.49
VAPA-203ENST00000577539 BTNL9Q6UXG8 535 aa5.75□□□□□ -1.49
VAPA-203ENST00000577539 NT5DC3Q86UY8 548 aa5.75□□□□□ -1.49
VAPA-203ENST00000577539 ZC3H3Q8IXZ2 948 aaKnown RBP5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms