RNA–Protein interactions for RNA: ENST00000563605.1

AC009088.3-201, humanhuman

TSL 3 BASIC

Gene AC009088.3, Length 357 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009088.3-201ENST00000563605 RFPL2O75678 378 aa16.97■□□□□ 0.31
AC009088.3-201ENST00000563605 PRPF6O94906 941 aaKnown RBP16.97■□□□□ 0.31
AC009088.3-201ENST00000563605 FGFR3P22607 806 aa16.97■□□□□ 0.31
AC009088.3-201ENST00000563605 TKTP29401 623 aaKnown RBP16.97■□□□□ 0.31
AC009088.3-201ENST00000563605 RPL9P32969 192 aaKnown RBP16.97■□□□□ 0.31
AC009088.3-201ENST00000563605 MTHFRP42898 656 aa16.97■□□□□ 0.31
AC009088.3-201ENST00000563605 AFMP43652 599 aa16.97■□□□□ 0.31
AC009088.3-201ENST00000563605 ASIC1P78348 528 aa16.97■□□□□ 0.31
AC009088.3-201ENST00000563605 KRT85P78386 507 aa16.97■□□□□ 0.31
AC009088.3-201ENST00000563605 L1TD1Q5T7N2 865 aaKnown RBP16.97■□□□□ 0.31
AC009088.3-201ENST00000563605 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.97■□□□□ 0.31
AC009088.3-201ENST00000563605 NOC3LQ8WTT2 800 aaKnown RBP16.97■□□□□ 0.31
AC009088.3-201ENST00000563605 LEO1Q8WVC0 666 aaPredicted RBP16.97■□□□□ 0.31
AC009088.3-201ENST00000563605 PIK3R5Q8WYR1 880 aa16.97■□□□□ 0.31
AC009088.3-201ENST00000563605 HVCN1Q96D96 273 aa16.97■□□□□ 0.31
AC009088.3-201ENST00000563605 CLSTN3Q9BQT9 956 aa16.97■□□□□ 0.31
AC009088.3-201ENST00000563605 STRA6Q9BX79 667 aa16.97■□□□□ 0.31
AC009088.3-201ENST00000563605 TRIM9Q9C026 710 aa16.97■□□□□ 0.31
AC009088.3-201ENST00000563605 BLZF1Q9H2G9 400 aa16.97■□□□□ 0.31
AC009088.3-201ENST00000563605 SFXN1Q9H9B4 322 aa16.97■□□□□ 0.31
AC009088.3-201ENST00000563605 KBTBD4Q9NVX7 518 aa16.97■□□□□ 0.31
AC009088.3-201ENST00000563605 AGO2Q9UKV8 859 aaKnown RBP16.97■□□□□ 0.31
AC009088.3-201ENST00000563605 KCNH3Q9ULD8 1083 aa16.97■□□□□ 0.31
AC009088.3-201ENST00000563605 CCDC195A0A1B0GUA6 201 aa16.96■□□□□ 0.31
AC009088.3-201ENST00000563605 LOC730098B7Z3J9 87 aa16.96■□□□□ 0.31
AC009088.3-201ENST00000563605 FAM189A1O60320 539 aa16.96■□□□□ 0.31
AC009088.3-201ENST00000563605 PPP1R37O75864 691 aa16.96■□□□□ 0.31
AC009088.3-201ENST00000563605 OR1D2P34982 312 aa16.96■□□□□ 0.31
AC009088.3-201ENST00000563605 CREMQ03060 361 aa16.96■□□□□ 0.31
AC009088.3-201ENST00000563605 ELMSAN1Q6PJG2 1045 aa16.96■□□□□ 0.31
AC009088.3-201ENST00000563605 GPR149Q86SP6 731 aa16.96■□□□□ 0.31
AC009088.3-201ENST00000563605 KREMEN2Q8NCW0 462 aa16.96■□□□□ 0.31
AC009088.3-201ENST00000563605 GLIS3Q8NEA6 775 aa16.96■□□□□ 0.31
AC009088.3-201ENST00000563605 OLFML3Q9NRN5 406 aa16.96■□□□□ 0.31
AC009088.3-201ENST00000563605 SERTAD1Q9UHV2 236 aa16.96■□□□□ 0.31
AC009088.3-201ENST00000563605 MUTYHQ9UIF7 546 aa16.96■□□□□ 0.31
AC009088.3-201ENST00000563605 CPSF3Q9UKF6 684 aaKnown RBP16.96■□□□□ 0.31
AC009088.3-201ENST00000563605 ATP6V1DQ9Y5K8 247 aa16.96■□□□□ 0.31
AC009088.3-201ENST00000563605 A0A1B0GVL5 298 aa16.95■□□□□ 0.3
AC009088.3-201ENST00000563605 FRMD3A2A2Y4 597 aa16.95■□□□□ 0.3
AC009088.3-201ENST00000563605 FAM86C2PA6NEL3 165 aa16.95■□□□□ 0.3
AC009088.3-201ENST00000563605 PI4K2BG5E9Z4 385 aa16.95■□□□□ 0.3
AC009088.3-201ENST00000563605 ADSSP30520 456 aa16.95■□□□□ 0.3
AC009088.3-201ENST00000563605 MCM4P33991 863 aa16.95■□□□□ 0.3
AC009088.3-201ENST00000563605 ARPP19P56211 112 aa16.95■□□□□ 0.3
AC009088.3-201ENST00000563605 POSTNQ15063 836 aa16.95■□□□□ 0.3
AC009088.3-201ENST00000563605 JADE1Q6IE81 842 aa16.95■□□□□ 0.3
AC009088.3-201ENST00000563605 LILRA6Q6PI73 481 aa16.95■□□□□ 0.3
AC009088.3-201ENST00000563605 GPR65Q8IYL9 337 aa16.95■□□□□ 0.3
AC009088.3-201ENST00000563605 GRAMD1CQ8IYS0 662 aa16.95■□□□□ 0.3
AC009088.3-201ENST00000563605 CEP57L1Q8IYX8 460 aa16.95■□□□□ 0.3
AC009088.3-201ENST00000563605 SAAL1Q96ER3 474 aa16.95■□□□□ 0.3
AC009088.3-201ENST00000563605 NECTIN4Q96NY8 510 aa16.95■□□□□ 0.3
AC009088.3-201ENST00000563605 C7orf25Q9BPX7 421 aa16.95■□□□□ 0.3
AC009088.3-201ENST00000563605 PCIF1Q9H4Z3 704 aa16.95■□□□□ 0.3
AC009088.3-201ENST00000563605 DPP7Q9UHL4 492 aa16.95■□□□□ 0.3
AC009088.3-201ENST00000563605 UBQLN1Q9UMX0 589 aaKnown RBP16.95■□□□□ 0.3
AC009088.3-201ENST00000563605 STYXL1Q9Y6J8 313 aa16.95■□□□□ 0.3
AC009088.3-201ENST00000563605 TRIP11Q15643 1979 aa16.95■□□□□ 0.3
AC009088.3-201ENST00000563605 MYH15Q9Y2K3 1946 aa16.94■□□□□ 0.3
AC009088.3-201ENST00000563605 GOLGA8IPA6NC78 632 aa16.94■□□□□ 0.3
AC009088.3-201ENST00000563605 GOLGA8JA6NMD2 632 aa16.94■□□□□ 0.3
AC009088.3-201ENST00000563605 DCXO43602 365 aa16.94■□□□□ 0.3
AC009088.3-201ENST00000563605 ALADP13716 330 aa16.94■□□□□ 0.3
AC009088.3-201ENST00000563605 ZBTB6Q15916 424 aa16.94■□□□□ 0.3
AC009088.3-201ENST00000563605 PDXDC1Q6P996 788 aa16.94■□□□□ 0.3
AC009088.3-201ENST00000563605 RSPO2Q6UXX9 243 aaPredicted RBP16.94■□□□□ 0.3
AC009088.3-201ENST00000563605 ZSWIM2Q8NEG5 633 aa16.94■□□□□ 0.3
AC009088.3-201ENST00000563605 FAM213AQ9BRX8 229 aa16.94■□□□□ 0.3
AC009088.3-201ENST00000563605 C1QTNF1Q9BXJ1 281 aa16.94■□□□□ 0.3
AC009088.3-201ENST00000563605 PLEKHA4Q9H4M7 779 aa16.94■□□□□ 0.3
AC009088.3-201ENST00000563605 PIDD1Q9HB75 910 aa16.94■□□□□ 0.3
AC009088.3-201ENST00000563605 CDY1Q9Y6F8 540 aa16.94■□□□□ 0.3
AC009088.3-201ENST00000563605 XPOTO43592 962 aaKnown RBP16.93■□□□□ 0.3
AC009088.3-201ENST00000563605 NFICP08651 508 aa16.93■□□□□ 0.3
AC009088.3-201ENST00000563605 PFKFB1P16118 471 aa16.93■□□□□ 0.3
AC009088.3-201ENST00000563605 CUL4BQ13620 913 aa16.93■□□□□ 0.3
AC009088.3-201ENST00000563605 ALCAMQ13740 583 aa16.93■□□□□ 0.3
AC009088.3-201ENST00000563605 TMEM132DQ14C87 1099 aa16.93■□□□□ 0.3
AC009088.3-201ENST00000563605 VARS2Q5ST30 1063 aaKnown RBP16.93■□□□□ 0.3
AC009088.3-201ENST00000563605 CRELD2Q6UXH1 353 aaPredicted RBP16.93■□□□□ 0.3
AC009088.3-201ENST00000563605 ANKS3Q6ZW76 656 aa16.93■□□□□ 0.3
AC009088.3-201ENST00000563605 STXBP4Q6ZWJ1 553 aa16.93■□□□□ 0.3
AC009088.3-201ENST00000563605 CD302Q8IX05 232 aa16.93■□□□□ 0.3
AC009088.3-201ENST00000563605 BEST2Q8NFU1 509 aa16.93■□□□□ 0.3
AC009088.3-201ENST00000563605 SMG7Q92540 1137 aaKnown RBP16.93■□□□□ 0.3
AC009088.3-201ENST00000563605 TMEM206Q9H813 350 aa16.93■□□□□ 0.3
AC009088.3-201ENST00000563605 GDPD2Q9HCC8 539 aa16.93■□□□□ 0.3
AC009088.3-201ENST00000563605 MTRRQ9UBK8 725 aa16.93■□□□□ 0.3
AC009088.3-201ENST00000563605 NR2E1Q9Y466 385 aa16.93■□□□□ 0.3
AC009088.3-201ENST00000563605 TIMM13Q9Y5L4 95 aaPredicted RBP16.93■□□□□ 0.3
AC009088.3-201ENST00000563605 C2CD4DB7Z1M9 353 aa16.92■□□□□ 0.3
AC009088.3-201ENST00000563605 PPEF2O14830 753 aa16.92■□□□□ 0.3
AC009088.3-201ENST00000563605 ADRB2P07550 413 aa16.92■□□□□ 0.3
AC009088.3-201ENST00000563605 CYP3A5P20815 502 aa16.92■□□□□ 0.3
AC009088.3-201ENST00000563605 CMA1P23946 247 aa16.92■□□□□ 0.3
AC009088.3-201ENST00000563605 FAM26FQ5R3K3 315 aa16.92■□□□□ 0.3
AC009088.3-201ENST00000563605 SPATA1Q5VX52 437 aa16.92■□□□□ 0.3
AC009088.3-201ENST00000563605 DSTYKQ6XUX3 929 aa16.92■□□□□ 0.3
AC009088.3-201ENST00000563605 HDAC7Q8WUI4 952 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms