RNA–Protein interactions for RNA: ENST00000561268.5

SPG11-224, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 4

Gene SPG11, Length 530 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-224ENST00000561268 TRIM67Q6ZTA4 783 aa7.54□□□□□ -1.2
SPG11-224ENST00000561268 TAS1R1Q7RTX1 841 aa7.54□□□□□ -1.2
SPG11-224ENST00000561268 C3orf58Q8NDZ4 430 aa7.54□□□□□ -1.2
SPG11-224ENST00000561268 FAM200AQ8TCP9 573 aa7.54□□□□□ -1.2
SPG11-224ENST00000561268 FAM193BQ96PV7 902 aaPredicted RBP7.54□□□□□ -1.2
SPG11-224ENST00000561268 COLEC11Q9BWP8 271 aa7.54□□□□□ -1.2
SPG11-224ENST00000561268 APOL6Q9BWW8 343 aa7.54□□□□□ -1.2
SPG11-224ENST00000561268 MFRPQ9BY79 579 aa7.54□□□□□ -1.2
SPG11-224ENST00000561268 MRPL4Q9BYD3 311 aaKnown RBP7.54□□□□□ -1.2
SPG11-224ENST00000561268 CCSER1Q9C0I3 900 aa7.54□□□□□ -1.2
SPG11-224ENST00000561268 PLEKHA4Q9H4M7 779 aa7.54□□□□□ -1.2
SPG11-224ENST00000561268 MAN1C1Q9NR34 630 aa7.54□□□□□ -1.2
SPG11-224ENST00000561268 ZDHHC7Q9NXF8 308 aa7.54□□□□□ -1.2
SPG11-224ENST00000561268 SNTG2Q9NY99 539 aa7.54□□□□□ -1.2
SPG11-224ENST00000561268 MTRRQ9UBK8 725 aa7.54□□□□□ -1.2
SPG11-224ENST00000561268 CACNG4Q9UBN1 327 aa7.54□□□□□ -1.2
SPG11-224ENST00000561268 CFAP45Q9UL16 551 aa7.54□□□□□ -1.2
SPG11-224ENST00000561268 SORCS3Q9UPU3 1222 aa7.54□□□□□ -1.2
SPG11-224ENST00000561268 DNM3Q9UQ16 869 aa7.54□□□□□ -1.2
SPG11-224ENST00000561268 CACNA1IQ9P0X4 2223 aa7.54□□□□□ -1.2
SPG11-224ENST00000561268 CLUHO75153 1309 aa7.53□□□□□ -1.2
SPG11-224ENST00000561268 VWA3AA6NCI4 1184 aa7.53□□□□□ -1.2
SPG11-224ENST00000561268 TMEM221A6NGB7 291 aa7.53□□□□□ -1.2
SPG11-224ENST00000561268 M0R296 226 aa7.53□□□□□ -1.2
SPG11-224ENST00000561268 N4BP1O75113 896 aaKnown RBP7.53□□□□□ -1.2
SPG11-224ENST00000561268 TOM1L1O75674 476 aa7.53□□□□□ -1.2
SPG11-224ENST00000561268 PPP1R37O75864 691 aa7.53□□□□□ -1.2
SPG11-224ENST00000561268 GLUD1P00367 558 aa7.53□□□□□ -1.2
SPG11-224ENST00000561268 MCF2P10911 925 aa7.53□□□□□ -1.2
SPG11-224ENST00000561268 CDC25BP30305 580 aa7.53□□□□□ -1.2
SPG11-224ENST00000561268 LONP1P36776 959 aaKnown RBP7.53□□□□□ -1.2
SPG11-224ENST00000561268 GRIN1Q05586 938 aa7.53□□□□□ -1.2
SPG11-224ENST00000561268 SOX4Q06945 474 aaPredicted RBP7.53□□□□□ -1.2
SPG11-224ENST00000561268 MCL1Q07820 350 aa7.53□□□□□ -1.2
SPG11-224ENST00000561268 ELAVL2Q12926 359 aaKnown RBP7.53□□□□□ -1.2
SPG11-224ENST00000561268 NOLC1Q14978 699 aaKnown RBP eCLIP7.53□□□□□ -1.2
SPG11-224ENST00000561268 UPP1Q16831 310 aa7.53□□□□□ -1.2
SPG11-224ENST00000561268 ARSHQ5FYA8 562 aa7.53□□□□□ -1.2
SPG11-224ENST00000561268 DMRTA1Q5VZB9 504 aa7.53□□□□□ -1.2
SPG11-224ENST00000561268 CCDC149Q6ZUS6 474 aa7.53□□□□□ -1.2
SPG11-224ENST00000561268 APBB1IPQ7Z5R6 666 aaPredicted RBP7.53□□□□□ -1.2
SPG11-224ENST00000561268 CABP7Q86V35 215 aa7.53□□□□□ -1.2
SPG11-224ENST00000561268 C12orf76Q8N812 135 aaPredicted RBP7.53□□□□□ -1.2
SPG11-224ENST00000561268 TDRD5Q8NAT2 981 aaKnown RBP7.53□□□□□ -1.2
SPG11-224ENST00000561268 MYRIPQ8NFW9 859 aa7.53□□□□□ -1.2
SPG11-224ENST00000561268 LNX1Q8TBB1 728 aaPredicted RBP7.53□□□□□ -1.2
SPG11-224ENST00000561268 TMC2Q8TDI7 906 aa7.53□□□□□ -1.2
SPG11-224ENST00000561268 DDX27Q96GQ7 796 aaKnown RBP7.53□□□□□ -1.2
SPG11-224ENST00000561268 RPGRIP1Q96KN7 1286 aa7.53□□□□□ -1.2
SPG11-224ENST00000561268 UROC1Q96N76 676 aa7.53□□□□□ -1.2
SPG11-224ENST00000561268 ZMAT2Q96NC0 199 aaKnown RBP7.53□□□□□ -1.2
SPG11-224ENST00000561268 REEP2Q9BRK0 252 aa7.53□□□□□ -1.2
SPG11-224ENST00000561268 HAPLN2Q9GZV7 340 aa7.53□□□□□ -1.2
SPG11-224ENST00000561268 ST6GALNAC4Q9H4F1 302 aa7.53□□□□□ -1.2
SPG11-224ENST00000561268 WDR6Q9NNW5 1121 aaKnown RBP7.53□□□□□ -1.2
SPG11-224ENST00000561268 KMT5AQ9NQR1 393 aa7.53□□□□□ -1.2
SPG11-224ENST00000561268 KCND1Q9NSA2 647 aa7.53□□□□□ -1.2
SPG11-224ENST00000561268 KLK14Q9P0G3 267 aa7.53□□□□□ -1.2
SPG11-224ENST00000561268 USP20Q9Y2K6 914 aa7.53□□□□□ -1.2
SPG11-224ENST00000561268 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.53□□□□□ -1.2
SPG11-224ENST00000561268 MYH10P35580 1976 aa7.53□□□□□ -1.2
SPG11-224ENST00000561268 EML5Q05BV3 1969 aa7.52□□□□□ -1.21
SPG11-224ENST00000561268 TTC26A0AVF1 554 aa7.52□□□□□ -1.21
SPG11-224ENST00000561268 CASTOR2A6NHX0 329 aa7.52□□□□□ -1.21
SPG11-224ENST00000561268 H3BQV1 296 aa7.52□□□□□ -1.21
SPG11-224ENST00000561268 K7ERI5 159 aa7.52□□□□□ -1.21
SPG11-224ENST00000561268 TGM5O43548 720 aa7.52□□□□□ -1.21
SPG11-224ENST00000561268 TBC1D4O60343 1298 aa7.52□□□□□ -1.21
SPG11-224ENST00000561268 NR1I2O75469 434 aa7.52□□□□□ -1.21
SPG11-224ENST00000561268 ZMYND10O75800 440 aa7.52□□□□□ -1.21
SPG11-224ENST00000561268 TUBB4AP04350 444 aa7.52□□□□□ -1.21
SPG11-224ENST00000561268 PLA2G4BP0C869 781 aa7.52□□□□□ -1.21
SPG11-224ENST00000561268 PLCG1P19174 1290 aa7.52□□□□□ -1.21
SPG11-224ENST00000561268 KLRC2P26717 231 aa7.52□□□□□ -1.21
SPG11-224ENST00000561268 AARSP49588 968 aaKnown RBP eCLIP7.52□□□□□ -1.21
SPG11-224ENST00000561268 MTMR3Q13615 1198 aa7.52□□□□□ -1.21
SPG11-224ENST00000561268 LARP1BQ659C4 914 aaKnown RBP7.52□□□□□ -1.21
SPG11-224ENST00000561268 KANK3Q6NY19 840 aa7.52□□□□□ -1.21
SPG11-224ENST00000561268 SLC39A4Q6P5W5 647 aa7.52□□□□□ -1.21
SPG11-224ENST00000561268 PDXDC1Q6P996 788 aa7.52□□□□□ -1.21
SPG11-224ENST00000561268 SARM1Q6SZW1 724 aa7.52□□□□□ -1.21
SPG11-224ENST00000561268 RTL10Q7L3V2 364 aa7.52□□□□□ -1.21
SPG11-224ENST00000561268 MAP4K3Q8IVH8 894 aa7.52□□□□□ -1.21
SPG11-224ENST00000561268 UBALD2Q8IYN6 164 aa7.52□□□□□ -1.21
SPG11-224ENST00000561268 FBXL6Q8N531 539 aa7.52□□□□□ -1.21
SPG11-224ENST00000561268 B3GALT6Q96L58 329 aa7.52□□□□□ -1.21
SPG11-224ENST00000561268 CLSTN3Q9BQT9 956 aa7.52□□□□□ -1.21
SPG11-224ENST00000561268 TTPALQ9BTX7 342 aa7.52□□□□□ -1.21
SPG11-224ENST00000561268 TARS2Q9BW92 718 aaKnown RBP7.52□□□□□ -1.21
SPG11-224ENST00000561268 APOL5Q9BWW9 433 aa7.52□□□□□ -1.21
SPG11-224ENST00000561268 TOPORSQ9NS56 1045 aaPredicted RBP7.52□□□□□ -1.21
SPG11-224ENST00000561268 LARSQ9P2J5 1176 aaKnown RBP7.52□□□□□ -1.21
SPG11-224ENST00000561268 EPS15L1Q9UBC2 864 aa7.52□□□□□ -1.21
SPG11-224ENST00000561268 PARP2Q9UGN5 583 aa7.52□□□□□ -1.21
SPG11-224ENST00000561268 DPP7Q9UHL4 492 aa7.52□□□□□ -1.21
SPG11-224ENST00000561268 KCNG1Q9UIX4 513 aa7.52□□□□□ -1.21
SPG11-224ENST00000561268 FBXO2Q9UK22 296 aaPredicted RBP7.52□□□□□ -1.21
SPG11-224ENST00000561268 DUSP12Q9UNI6 340 aa7.52□□□□□ -1.21
SPG11-224ENST00000561268 BACE2Q9Y5Z0 518 aa7.52□□□□□ -1.21
SPG11-224ENST00000561268 FAM186AA6NE01 2351 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms