RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 CCND3P30281 292 aaPredicted RBP14.81□□□□□ -0.04
TPM1-215ENST00000558868 PDE6CP51160 858 aa14.81□□□□□ -0.04
TPM1-215ENST00000558868 YARSP54577 528 aaKnown RBP14.81□□□□□ -0.04
TPM1-215ENST00000558868 OSTNP61366 133 aa14.81□□□□□ -0.04
TPM1-215ENST00000558868 YWHAEP62258 255 aaKnown RBP14.81□□□□□ -0.04
TPM1-215ENST00000558868 NOP14P78316 857 aaKnown RBP14.81□□□□□ -0.04
TPM1-215ENST00000558868 TRIM32Q13049 653 aa14.81□□□□□ -0.04
TPM1-215ENST00000558868 CUL2Q13617 745 aa14.81□□□□□ -0.04
TPM1-215ENST00000558868 SNX17Q15036 470 aa14.81□□□□□ -0.04
TPM1-215ENST00000558868 RPAINQ86UA6 219 aa14.81□□□□□ -0.04
TPM1-215ENST00000558868 ZNF677Q86XU0 584 aa14.81□□□□□ -0.04
TPM1-215ENST00000558868 SLAIN1Q8ND83 568 aa14.81□□□□□ -0.04
TPM1-215ENST00000558868 KAT5Q92993 513 aa14.81□□□□□ -0.04
TPM1-215ENST00000558868 TSPAN18Q96SJ8 248 aa14.81□□□□□ -0.04
TPM1-215ENST00000558868 OSMRQ99650 979 aa14.81□□□□□ -0.04
TPM1-215ENST00000558868 PI4K2AQ9BTU6 479 aa14.81□□□□□ -0.04
TPM1-215ENST00000558868 MTMR12Q9C0I1 747 aa14.81□□□□□ -0.04
TPM1-215ENST00000558868 DDX20Q9UHI6 824 aaKnown RBP14.81□□□□□ -0.04
TPM1-215ENST00000558868 DERAQ9Y315 318 aa14.81□□□□□ -0.04
TPM1-215ENST00000558868 MROH7Q68CQ1 1323 aa14.81□□□□□ -0.04
TPM1-215ENST00000558868 LACTBL1A8MY62 500 aa14.8□□□□□ -0.04
TPM1-215ENST00000558868 CYP26A1O43174 497 aa14.8□□□□□ -0.04
TPM1-215ENST00000558868 ABL1P00519 1130 aa14.8□□□□□ -0.04
TPM1-215ENST00000558868 ATICP31939 592 aa14.8□□□□□ -0.04
TPM1-215ENST00000558868 NAP1L1P55209 391 aaKnown RBP14.8□□□□□ -0.04
TPM1-215ENST00000558868 MRPS6P82932 125 aaKnown RBP14.8□□□□□ -0.04
TPM1-215ENST00000558868 PTPN11Q06124 597 aaPredicted RBP14.8□□□□□ -0.04
TPM1-215ENST00000558868 TMEM62Q0P6H9 643 aa14.8□□□□□ -0.04
TPM1-215ENST00000558868 HIC1Q14526 733 aa14.8□□□□□ -0.04
TPM1-215ENST00000558868 KCNA10Q16322 511 aa14.8□□□□□ -0.04
TPM1-215ENST00000558868 FAM47CQ5HY64 1035 aa14.8□□□□□ -0.04
TPM1-215ENST00000558868 CDR2LQ86X02 465 aaPredicted RBP14.8□□□□□ -0.04
TPM1-215ENST00000558868 GLYCTKQ8IVS8 523 aa14.8□□□□□ -0.04
TPM1-215ENST00000558868 CEP120Q8N960 986 aa14.8□□□□□ -0.04
TPM1-215ENST00000558868 LNX1Q8TBB1 728 aaPredicted RBP14.8□□□□□ -0.04
TPM1-215ENST00000558868 CELF4Q9BZC1 486 aaKnown RBP14.8□□□□□ -0.04
TPM1-215ENST00000558868 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.8□□□□□ -0.04
TPM1-215ENST00000558868 SEPT11Q9NVA2 429 aaKnown RBP14.8□□□□□ -0.04
TPM1-215ENST00000558868 TSKSQ9UJT2 592 aa14.8□□□□□ -0.04
TPM1-215ENST00000558868 C2CD2Q9Y426 696 aa14.8□□□□□ -0.04
TPM1-215ENST00000558868 JRKLQ9Y4A0 524 aa14.8□□□□□ -0.04
TPM1-215ENST00000558868 PCDHB2Q9Y5E7 798 aa14.8□□□□□ -0.04
TPM1-215ENST00000558868 TRPV2Q9Y5S1 764 aa14.8□□□□□ -0.04
TPM1-215ENST00000558868 SCN10AQ9Y5Y9 1956 aa14.8□□□□□ -0.04
TPM1-215ENST00000558868 SGPL1O95470 568 aa14.79□□□□□ -0.04
TPM1-215ENST00000558868 NPTXRO95502 500 aa14.79□□□□□ -0.04
TPM1-215ENST00000558868 ASGR1P07306 291 aa14.79□□□□□ -0.04
TPM1-215ENST00000558868 TMEM253P0C7T8 217 aa14.79□□□□□ -0.04
TPM1-215ENST00000558868 GZMAP12544 262 aa14.79□□□□□ -0.04
TPM1-215ENST00000558868 P4HA1P13674 534 aa14.79□□□□□ -0.04
TPM1-215ENST00000558868 CYP11B1P15538 503 aa14.79□□□□□ -0.04
TPM1-215ENST00000558868 HOXA11P31270 313 aaPredicted RBP14.79□□□□□ -0.04
TPM1-215ENST00000558868 ZNF200P98182 395 aaPredicted RBP14.79□□□□□ -0.04
TPM1-215ENST00000558868 CDR2Q01850 454 aa14.79□□□□□ -0.04
TPM1-215ENST00000558868 TMEM132DQ14C87 1099 aa14.79□□□□□ -0.04
TPM1-215ENST00000558868 ZNF699Q32M78 642 aa14.79□□□□□ -0.04
TPM1-215ENST00000558868 CCSAPQ6IQ19 270 aaPredicted RBP14.79□□□□□ -0.04
TPM1-215ENST00000558868 PPP1R2P3Q6NXS1 205 aa14.79□□□□□ -0.04
TPM1-215ENST00000558868 EFCAB13Q8IY85 973 aa14.79□□□□□ -0.04
TPM1-215ENST00000558868 RPUSD2Q8IZ73 545 aaKnown RBP14.79□□□□□ -0.04
TPM1-215ENST00000558868 MNS1Q8NEH6 495 aa14.79□□□□□ -0.04
TPM1-215ENST00000558868 EPS8L1Q8TE68 723 aa14.79□□□□□ -0.04
TPM1-215ENST00000558868 CTNNBL1Q8WYA6 563 aaPredicted RBP14.79□□□□□ -0.04
TPM1-215ENST00000558868 TSEN34Q9BSV6 310 aaKnown RBP14.79□□□□□ -0.04
TPM1-215ENST00000558868 TRIM6Q9C030 488 aaPredicted RBP14.79□□□□□ -0.04
TPM1-215ENST00000558868 NIF3L1Q9GZT8 377 aa14.79□□□□□ -0.04
TPM1-215ENST00000558868 CDHR5Q9HBB8 845 aa14.79□□□□□ -0.04
TPM1-215ENST00000558868 CDC23Q9UJX2 597 aa14.79□□□□□ -0.04
TPM1-215ENST00000558868 NOCTQ9UK39 431 aaKnown RBP14.79□□□□□ -0.04
TPM1-215ENST00000558868 TFR2Q9UP52 801 aa14.79□□□□□ -0.04
TPM1-215ENST00000558868 MRFAP1Q9Y605 127 aa14.79□□□□□ -0.04
TPM1-215ENST00000558868 DUSP10Q9Y6W6 482 aa14.79□□□□□ -0.04
TPM1-215ENST00000558868 THSD7BQ9C0I4 1608 aa14.78□□□□□ -0.04
TPM1-215ENST00000558868 ANKRD62A6NC57 917 aa14.78□□□□□ -0.04
TPM1-215ENST00000558868 DYNC1I1O14576 645 aa14.78□□□□□ -0.04
TPM1-215ENST00000558868 RTN2O75298 545 aa14.78□□□□□ -0.04
TPM1-215ENST00000558868 MOCS3O95396 460 aa14.78□□□□□ -0.04
TPM1-215ENST00000558868 FGFR4P22455 802 aa14.78□□□□□ -0.04
TPM1-215ENST00000558868 MYL6P60660 151 aa14.78□□□□□ -0.04
TPM1-215ENST00000558868 TUBB4BP68371 445 aa14.78□□□□□ -0.04
TPM1-215ENST00000558868 CAP1Q01518 475 aa14.78□□□□□ -0.04
TPM1-215ENST00000558868 WHAMMP3Q1A5X7 153 aa14.78□□□□□ -0.04
TPM1-215ENST00000558868 SLC10A6Q3KNW5 377 aa14.78□□□□□ -0.04
TPM1-215ENST00000558868 PAPD7Q5XG87 772 aaKnown RBP14.78□□□□□ -0.04
TPM1-215ENST00000558868 JADE1Q6IE81 842 aa14.78□□□□□ -0.04
TPM1-215ENST00000558868 SERINC5Q86VE9 423 aa14.78□□□□□ -0.04
TPM1-215ENST00000558868 CEP112Q8N8E3 955 aa14.78□□□□□ -0.04
TPM1-215ENST00000558868 FAM124BQ9H5Z6 455 aaPredicted RBP14.78□□□□□ -0.04
TPM1-215ENST00000558868 APOBEC3GQ9HC16 384 aaKnown RBP14.78□□□□□ -0.04
TPM1-215ENST00000558868 ITGA11Q9UKX5 1188 aa14.78□□□□□ -0.04
TPM1-215ENST00000558868 CNTN6Q9UQ52 1028 aa14.78□□□□□ -0.04
TPM1-215ENST00000558868 NUB1Q9Y5A7 615 aa14.78□□□□□ -0.04
TPM1-215ENST00000558868 PCDHB4Q9Y5E5 795 aa14.78□□□□□ -0.04
TPM1-215ENST00000558868 MOXD2PA6NHM9 499 aa14.77□□□□□ -0.05
TPM1-215ENST00000558868 FANCGO15287 622 aa14.77□□□□□ -0.05
TPM1-215ENST00000558868 CTIFO43310 598 aaKnown RBP14.77□□□□□ -0.05
TPM1-215ENST00000558868 CST3P01034 146 aaPredicted RBP14.77□□□□□ -0.05
TPM1-215ENST00000558868 NFICP08651 508 aa14.77□□□□□ -0.05
TPM1-215ENST00000558868 ACO1P21399 889 aaKnown RBP14.77□□□□□ -0.05
TPM1-215ENST00000558868 GALCP54803 685 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms