RNA–Protein interactions for RNA: ENST00000557958.1

LDLR-206, Transcript of low density lipoprotein receptor, humanhuman

TSL 2

Gene LDLR, Length 1,881 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-206ENST00000557958 NCK2O43639 380 aa18.07■□□□□ 0.48
LDLR-206ENST00000557958 FAM189A1O60320 539 aa18.07■□□□□ 0.48
LDLR-206ENST00000557958 IL18RAPO95256 599 aa18.07■□□□□ 0.48
LDLR-206ENST00000557958 SMIM10L2AP0DMW4 78 aa18.07■□□□□ 0.48
LDLR-206ENST00000557958 SMIM10L2BP0DMW5 78 aa18.07■□□□□ 0.48
LDLR-206ENST00000557958 ABCB4P21439 1286 aa18.07■□□□□ 0.48
LDLR-206ENST00000557958 GRK4P32298 578 aa18.07■□□□□ 0.48
LDLR-206ENST00000557958 CLCN6P51797 869 aa18.07■□□□□ 0.48
LDLR-206ENST00000557958 GJA9P57773 515 aa18.07■□□□□ 0.48
LDLR-206ENST00000557958 CBX1P83916 185 aa18.07■□□□□ 0.48
LDLR-206ENST00000557958 CDC42EP1Q00587 391 aa18.07■□□□□ 0.48
LDLR-206ENST00000557958 POU5F1Q01860 360 aaKnown RBP18.07■□□□□ 0.48
LDLR-206ENST00000557958 CXCL17Q6UXB2 119 aa18.07■□□□□ 0.48
LDLR-206ENST00000557958 PEX26Q7Z412 305 aa18.07■□□□□ 0.48
LDLR-206ENST00000557958 NOP9Q86U38 636 aaKnown RBP18.07■□□□□ 0.48
LDLR-206ENST00000557958 SLC47A2Q86VL8 602 aa18.07■□□□□ 0.48
LDLR-206ENST00000557958 LRRC57Q8N9N7 239 aa18.07■□□□□ 0.48
LDLR-206ENST00000557958 SH3TC2Q8TF17 1288 aa18.07■□□□□ 0.48
LDLR-206ENST00000557958 SCLT1Q96NL6 688 aa18.07■□□□□ 0.48
LDLR-206ENST00000557958 PI4K2AQ9BTU6 479 aa18.07■□□□□ 0.48
LDLR-206ENST00000557958 PTPRHQ9HD43 1115 aa18.07■□□□□ 0.48
LDLR-206ENST00000557958 PCDHB2Q9Y5E7 798 aa18.07■□□□□ 0.48
LDLR-206ENST00000557958 F2P00734 622 aa18.07■□□□□ 0.48
LDLR-206ENST00000557958 FTLP02792 175 aaPredicted RBP18.07■□□□□ 0.48
LDLR-206ENST00000557958 NCOA4Q13772 614 aa18.07■□□□□ 0.48
LDLR-206ENST00000557958 DUOXA2Q1HG44 320 aa18.07■□□□□ 0.48
LDLR-206ENST00000557958 DAAM2Q86T65 1068 aa18.07■□□□□ 0.48
LDLR-206ENST00000557958 SLC35G2Q8TBE7 412 aa18.07■□□□□ 0.48
LDLR-206ENST00000557958 COG1Q8WTW3 980 aa18.07■□□□□ 0.48
LDLR-206ENST00000557958 WBP1LQ9NX94 342 aa18.07■□□□□ 0.48
LDLR-206ENST00000557958 TARSL2A2RTX5 802 aaKnown RBP18.06■□□□□ 0.48
LDLR-206ENST00000557958 TTLL13PA6NNM8 815 aa18.06■□□□□ 0.48
LDLR-206ENST00000557958 ABLIM1O14639 778 aa18.06■□□□□ 0.48
LDLR-206ENST00000557958 VNN1O95497 513 aa18.06■□□□□ 0.48
LDLR-206ENST00000557958 NOP14P78316 857 aaKnown RBP18.06■□□□□ 0.48
LDLR-206ENST00000557958 GPC5P78333 572 aa18.06■□□□□ 0.48
LDLR-206ENST00000557958 PURAQ00577 322 aaKnown RBP18.06■□□□□ 0.48
LDLR-206ENST00000557958 CUL2Q13617 745 aa18.06■□□□□ 0.48
LDLR-206ENST00000557958 TCEAL1Q15170 157 aa18.06■□□□□ 0.48
LDLR-206ENST00000557958 ZNF410Q86VK4 478 aa18.06■□□□□ 0.48
LDLR-206ENST00000557958 C7orf31Q8N865 590 aa18.06■□□□□ 0.48
LDLR-206ENST00000557958 SLAIN1Q8ND83 568 aa18.06■□□□□ 0.48
LDLR-206ENST00000557958 PBKQ96KB5 322 aa18.06■□□□□ 0.48
LDLR-206ENST00000557958 SELENOOQ9BVL4 669 aa18.06■□□□□ 0.48
LDLR-206ENST00000557958 ANKZF1Q9H8Y5 726 aa18.06■□□□□ 0.48
LDLR-206ENST00000557958 IFT122Q9HBG6 1241 aa18.06■□□□□ 0.48
LDLR-206ENST00000557958 ARFGAP3Q9NP61 516 aa18.06■□□□□ 0.48
LDLR-206ENST00000557958 DDX20Q9UHI6 824 aaKnown RBP18.06■□□□□ 0.48
LDLR-206ENST00000557958 PTPRJQ12913 1337 aa18.06■□□□□ 0.48
LDLR-206ENST00000557958 KIF4AO95239 1232 aa18.05■□□□□ 0.48
LDLR-206ENST00000557958 TNNC2P02585 160 aa18.05■□□□□ 0.48
LDLR-206ENST00000557958 VTNP04004 478 aa18.05■□□□□ 0.48
LDLR-206ENST00000557958 RHOXF2BP0C7M4 288 aa18.05■□□□□ 0.48
LDLR-206ENST00000557958 TMEM191BP0C7N4 346 aa18.05■□□□□ 0.48
LDLR-206ENST00000557958 MCF2P10911 925 aa18.05■□□□□ 0.48
LDLR-206ENST00000557958 TNFSF9P41273 254 aa18.05■□□□□ 0.48
LDLR-206ENST00000557958 HADHBP55084 474 aaKnown RBP18.05■□□□□ 0.48
LDLR-206ENST00000557958 WNT7BP56706 349 aa18.05■□□□□ 0.48
LDLR-206ENST00000557958 TAF3Q5VWG9 929 aa18.05■□□□□ 0.48
LDLR-206ENST00000557958 APBB1IPQ7Z5R6 666 aaPredicted RBP18.05■□□□□ 0.48
LDLR-206ENST00000557958 SLFN11Q7Z7L1 901 aa18.05■□□□□ 0.48
LDLR-206ENST00000557958 NOA1Q8NC60 698 aaKnown RBP18.05■□□□□ 0.48
LDLR-206ENST00000557958 NLRP7Q8WX94 980 aa18.05■□□□□ 0.48
LDLR-206ENST00000557958 FAM212AQ96EL1 285 aa18.05■□□□□ 0.48
LDLR-206ENST00000557958 ANKRD36BP1Q96IX9 119 aa18.05■□□□□ 0.48
LDLR-206ENST00000557958 PSMB7Q99436 277 aa18.05■□□□□ 0.48
LDLR-206ENST00000557958 RHOXF2Q9BQY4 288 aa18.05■□□□□ 0.48
LDLR-206ENST00000557958 KATNAL1Q9BW62 490 aa18.05■□□□□ 0.48
LDLR-206ENST00000557958 FAM49AQ9H0Q0 323 aaPredicted RBP18.05■□□□□ 0.48
LDLR-206ENST00000557958 THAP2Q9H0W7 228 aa18.05■□□□□ 0.48
LDLR-206ENST00000557958 RPF1Q9H9Y2 349 aaKnown RBP18.05■□□□□ 0.48
LDLR-206ENST00000557958 RAB21Q9UL25 225 aa18.05■□□□□ 0.48
LDLR-206ENST00000557958 THSD7BQ9C0I4 1608 aa18.05■□□□□ 0.48
LDLR-206ENST00000557958 A0A087WZ62 844 aa18.05■□□□□ 0.48
LDLR-206ENST00000557958 B4GALT4O60513 344 aa18.05■□□□□ 0.48
LDLR-206ENST00000557958 CLTAP09496 248 aa18.05■□□□□ 0.48
LDLR-206ENST00000557958 CXCR5P32302 372 aa18.05■□□□□ 0.48
LDLR-206ENST00000557958 PRMT2P55345 433 aa18.05■□□□□ 0.48
LDLR-206ENST00000557958 ZNF200P98182 395 aaPredicted RBP18.05■□□□□ 0.48
LDLR-206ENST00000557958 FMO1Q01740 532 aa18.05■□□□□ 0.48
LDLR-206ENST00000557958 TRPC3Q13507 836 aa18.05■□□□□ 0.48
LDLR-206ENST00000557958 KCNA10Q16322 511 aa18.05■□□□□ 0.48
LDLR-206ENST00000557958 SEZ6Q53EL9 994 aa18.05■□□□□ 0.48
LDLR-206ENST00000557958 MARCH8Q5T0T0 291 aa18.05■□□□□ 0.48
LDLR-206ENST00000557958 PPP1R2P3Q6NXS1 205 aa18.05■□□□□ 0.48
LDLR-206ENST00000557958 THNSL1Q8IYQ7 743 aa18.05■□□□□ 0.48
LDLR-206ENST00000557958 OR5B17Q8NGF7 314 aa18.05■□□□□ 0.48
LDLR-206ENST00000557958 RUBCNQ92622 972 aa18.05■□□□□ 0.48
LDLR-206ENST00000557958 FDXACB1Q9BRP7 624 aaPredicted RBP18.05■□□□□ 0.48
LDLR-206ENST00000557958 MTG1Q9BT17 334 aaPredicted RBP18.05■□□□□ 0.48
LDLR-206ENST00000557958 CDT1Q9H211 546 aa18.05■□□□□ 0.48
LDLR-206ENST00000557958 HMX1Q9NP08 348 aaPredicted RBP18.05■□□□□ 0.48
LDLR-206ENST00000557958 TAS2R14Q9NYV8 317 aa18.05■□□□□ 0.48
LDLR-206ENST00000557958 AMFRQ9UKV5 643 aa18.05■□□□□ 0.48
LDLR-206ENST00000557958 PDE2AO00408 941 aaPredicted RBP18.04■□□□□ 0.48
LDLR-206ENST00000557958 ATP8B1O43520 1251 aa18.04■□□□□ 0.48
LDLR-206ENST00000557958 ERLIN2O94905 339 aa18.04■□□□□ 0.48
LDLR-206ENST00000557958 MMEP08473 750 aa18.04■□□□□ 0.48
LDLR-206ENST00000557958 CHRNB2P17787 502 aa18.04■□□□□ 0.48
LDLR-206ENST00000557958 TMEM62Q0P6H9 643 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms