RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 POLR3DP05423 398 aaPredicted RBP2.67□□□□□ -1.98
TRAV1-1-201ENST00000542354 CTSBP07858 339 aa2.67□□□□□ -1.98
TRAV1-1-201ENST00000542354 LAMP2P13473 410 aa2.67□□□□□ -1.98
TRAV1-1-201ENST00000542354 RPL17P18621 184 aaKnown RBP2.67□□□□□ -1.98
TRAV1-1-201ENST00000542354 NME2P22392 152 aa2.67□□□□□ -1.98
TRAV1-1-201ENST00000542354 ARNTP27540 789 aa2.67□□□□□ -1.98
TRAV1-1-201ENST00000542354 STAT3P40763 770 aa2.67□□□□□ -1.98
TRAV1-1-201ENST00000542354 MAPK8P45983 427 aa2.67□□□□□ -1.98
TRAV1-1-201ENST00000542354 ATXN3P54252 364 aaPredicted RBP2.67□□□□□ -1.98
TRAV1-1-201ENST00000542354 INHBCP55103 352 aa2.67□□□□□ -1.98
TRAV1-1-201ENST00000542354 CHMP4BP1P59074 171 aa2.67□□□□□ -1.98
TRAV1-1-201ENST00000542354 NFKB2Q00653 900 aa2.67□□□□□ -1.98
TRAV1-1-201ENST00000542354 CCDC173Q0VFZ6 552 aa2.67□□□□□ -1.98
TRAV1-1-201ENST00000542354 NCAPHQ15003 741 aa2.67□□□□□ -1.98
TRAV1-1-201ENST00000542354 IGFBP7Q16270 282 aa2.67□□□□□ -1.98
TRAV1-1-201ENST00000542354 ZXDCQ2QGD7 858 aaPredicted RBP2.67□□□□□ -1.98
TRAV1-1-201ENST00000542354 SMTNL2Q2TAL5 461 aa2.67□□□□□ -1.98
TRAV1-1-201ENST00000542354 CAVIN4Q5BKX8 364 aa2.67□□□□□ -1.98
TRAV1-1-201ENST00000542354 ZC3H12AQ5D1E8 599 aaKnown RBP2.67□□□□□ -1.98
TRAV1-1-201ENST00000542354 SPOUT1Q5T280 376 aaKnown RBP2.67□□□□□ -1.98
TRAV1-1-201ENST00000542354 SFRP5Q5T4F7 317 aa2.67□□□□□ -1.98
TRAV1-1-201ENST00000542354 TCERG1LQ5VWI1 586 aa2.67□□□□□ -1.98
TRAV1-1-201ENST00000542354 HIST2H2BDQ6DRA6 164 aa2.67□□□□□ -1.98
TRAV1-1-201ENST00000542354 LCNL1Q6ZST4 164 aa2.67□□□□□ -1.98
TRAV1-1-201ENST00000542354 TPRG1Q6ZUI0 275 aa2.67□□□□□ -1.98
TRAV1-1-201ENST00000542354 ARMCX2Q7L311 632 aa2.67□□□□□ -1.98
TRAV1-1-201ENST00000542354 MAMDC2Q7Z304 686 aaPredicted RBP2.67□□□□□ -1.98
TRAV1-1-201ENST00000542354 TMC7Q7Z402 723 aa2.67□□□□□ -1.98
TRAV1-1-201ENST00000542354 IRF2BP1Q8IU81 584 aa2.67□□□□□ -1.98
TRAV1-1-201ENST00000542354 RIOX2Q8IUF8 465 aa2.67□□□□□ -1.98
TRAV1-1-201ENST00000542354 SULF2Q8IWU5 870 aa2.67□□□□□ -1.98
TRAV1-1-201ENST00000542354 SPACA3Q8IXA5 215 aa2.67□□□□□ -1.98
TRAV1-1-201ENST00000542354 SLC34A3Q8N130 599 aa2.67□□□□□ -1.98
TRAV1-1-201ENST00000542354 LILRA2Q8N149 483 aa2.67□□□□□ -1.98
TRAV1-1-201ENST00000542354 MFSD2AQ8NA29 543 aa2.67□□□□□ -1.98
TRAV1-1-201ENST00000542354 SSC4DQ8WTU2 575 aa2.67□□□□□ -1.98
TRAV1-1-201ENST00000542354 APBB2Q92870 758 aa2.67□□□□□ -1.98
TRAV1-1-201ENST00000542354 GLG1Q92896 1179 aa2.67□□□□□ -1.98
TRAV1-1-201ENST00000542354 KCNN1Q92952 543 aa2.67□□□□□ -1.98
TRAV1-1-201ENST00000542354 ISL2Q96A47 359 aa2.67□□□□□ -1.98
TRAV1-1-201ENST00000542354 ELMO3Q96BJ8 720 aa2.67□□□□□ -1.98
TRAV1-1-201ENST00000542354 NXPE2Q96DL1 559 aa2.67□□□□□ -1.98
TRAV1-1-201ENST00000542354 TESK2Q96S53 571 aa2.67□□□□□ -1.98
TRAV1-1-201ENST00000542354 DIRC2Q96SL1 478 aa2.67□□□□□ -1.98
TRAV1-1-201ENST00000542354 DNAJC2Q99543 621 aaKnown RBP2.67□□□□□ -1.98
TRAV1-1-201ENST00000542354 NUSAP1Q9BXS6 441 aaKnown RBP2.67□□□□□ -1.98
TRAV1-1-201ENST00000542354 KRTAP4-5Q9BYR2 181 aa2.67□□□□□ -1.98
TRAV1-1-201ENST00000542354 SRCIN1Q9C0H9 1055 aa2.67□□□□□ -1.98
TRAV1-1-201ENST00000542354 KIAA1683Q9H0B3 1180 aa2.67□□□□□ -1.98
TRAV1-1-201ENST00000542354 TRIT1Q9H3H1 467 aaKnown RBP2.67□□□□□ -1.98
TRAV1-1-201ENST00000542354 ZCCHC4Q9H5U6 513 aa2.67□□□□□ -1.98
TRAV1-1-201ENST00000542354 CARS2Q9HA77 564 aaKnown RBP2.67□□□□□ -1.98
TRAV1-1-201ENST00000542354 NPHS2Q9NP85 383 aa2.67□□□□□ -1.98
TRAV1-1-201ENST00000542354 CWC25Q9NXE8 425 aaPredicted RBP2.67□□□□□ -1.98
TRAV1-1-201ENST00000542354 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP2.67□□□□□ -1.98
TRAV1-1-201ENST00000542354 PI4KBQ9UBF8 816 aa2.67□□□□□ -1.98
TRAV1-1-201ENST00000542354 LZTS1Q9Y250 596 aa2.67□□□□□ -1.98
TRAV1-1-201ENST00000542354 AK5Q9Y6K8 562 aa2.67□□□□□ -1.98
TRAV1-1-201ENST00000542354 TGP01266 2768 aa2.67□□□□□ -1.98
TRAV1-1-201ENST00000542354 PCSK5Q92824 1860 aa2.67□□□□□ -1.98
TRAV1-1-201ENST00000542354 F5P12259 2224 aa2.66□□□□□ -1.98
TRAV1-1-201ENST00000542354 ADAMTS9Q9P2N4 1935 aa2.66□□□□□ -1.98
TRAV1-1-201ENST00000542354 DNAJC25-GNG10A0A024R161 153 aa2.66□□□□□ -1.98
TRAV1-1-201ENST00000542354 ANKRD18BA2A2Z9 1011 aa2.66□□□□□ -1.98
TRAV1-1-201ENST00000542354 K7ESF4 209 aa2.66□□□□□ -1.98
TRAV1-1-201ENST00000542354 OPHN1O60890 802 aa2.66□□□□□ -1.98
TRAV1-1-201ENST00000542354 N4BP1O75113 896 aaKnown RBP2.66□□□□□ -1.98
TRAV1-1-201ENST00000542354 CLASP2O75122 1294 aaKnown RBP2.66□□□□□ -1.98
TRAV1-1-201ENST00000542354 LEFTY1O75610 366 aa2.66□□□□□ -1.98
TRAV1-1-201ENST00000542354 LINC00310P59036 64 aa2.66□□□□□ -1.98
TRAV1-1-201ENST00000542354 KRT17Q04695 432 aa2.66□□□□□ -1.98
TRAV1-1-201ENST00000542354 HTR4Q13639 388 aa2.66□□□□□ -1.98
TRAV1-1-201ENST00000542354 DCTN1Q14203 1278 aa2.66□□□□□ -1.98
TRAV1-1-201ENST00000542354 TMEM132BQ14DG7 1078 aa2.66□□□□□ -1.98
TRAV1-1-201ENST00000542354 ECM1Q16610 540 aa2.66□□□□□ -1.98
TRAV1-1-201ENST00000542354 MAPK6Q16659 721 aa2.66□□□□□ -1.98
TRAV1-1-201ENST00000542354 PLK5Q496M5 336 aa2.66□□□□□ -1.98
TRAV1-1-201ENST00000542354 C2orf27AQ580R0 203 aa2.66□□□□□ -1.98
TRAV1-1-201ENST00000542354 BEND3Q5T5X7 828 aa2.66□□□□□ -1.98
TRAV1-1-201ENST00000542354 LCE4AQ5TA78 99 aa2.66□□□□□ -1.98
TRAV1-1-201ENST00000542354 FHL5Q5TD97 284 aa2.66□□□□□ -1.98
TRAV1-1-201ENST00000542354 C15orf39Q6ZRI6 1047 aa2.66□□□□□ -1.98
TRAV1-1-201ENST00000542354 FBXO33Q7Z6M2 555 aa2.66□□□□□ -1.98
TRAV1-1-201ENST00000542354 MORC1Q86VD1 984 aa2.66□□□□□ -1.98
TRAV1-1-201ENST00000542354 SESTD1Q86VW0 696 aa2.66□□□□□ -1.98
TRAV1-1-201ENST00000542354 C1QL4Q86Z23 238 aa2.66□□□□□ -1.98
TRAV1-1-201ENST00000542354 FOXP4Q8IVH2 680 aaPredicted RBP2.66□□□□□ -1.98
TRAV1-1-201ENST00000542354 CCDC144CPQ8IYA2 1237 aa2.66□□□□□ -1.98
TRAV1-1-201ENST00000542354 THNSL1Q8IYQ7 743 aa2.66□□□□□ -1.98
TRAV1-1-201ENST00000542354 MRPL43Q8N983 215 aaKnown RBP2.66□□□□□ -1.98
TRAV1-1-201ENST00000542354 FAM133AQ8N9E0 248 aa2.66□□□□□ -1.98
TRAV1-1-201ENST00000542354 WDR66Q8TBY9 1149 aa2.66□□□□□ -1.98
TRAV1-1-201ENST00000542354 PIWIL2Q8TC59 973 aaKnown RBP2.66□□□□□ -1.98
TRAV1-1-201ENST00000542354 PPP1R13LQ8WUF5 828 aa2.66□□□□□ -1.98
TRAV1-1-201ENST00000542354 SNRNP27Q8WVK2 155 aaKnown RBP2.66□□□□□ -1.98
TRAV1-1-201ENST00000542354 MRPS27Q92552 414 aaKnown RBP2.66□□□□□ -1.98
TRAV1-1-201ENST00000542354 TMEM176AQ96HP8 235 aa2.66□□□□□ -1.98
TRAV1-1-201ENST00000542354 CTAGE1Q96RT6 745 aa2.66□□□□□ -1.98
TRAV1-1-201ENST00000542354 LGMNQ99538 433 aa2.66□□□□□ -1.98
TRAV1-1-201ENST00000542354 KATNBL1Q9H079 304 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms