RNA–Protein interactions for RNA: ENST00000522117.5

SPIDR-217, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,745 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-217ENST00000522117 SCG2P13521 617 aa12.74□□□□□ -0.37
SPIDR-217ENST00000522117 PGM1P36871 562 aa12.74□□□□□ -0.37
SPIDR-217ENST00000522117 AP2B1P63010 937 aa12.74□□□□□ -0.37
SPIDR-217ENST00000522117 PTK2Q05397 1052 aa12.74□□□□□ -0.37
SPIDR-217ENST00000522117 COL19A1Q14993 1142 aa12.74□□□□□ -0.37
SPIDR-217ENST00000522117 ANKRD20A4Q4UJ75 823 aa12.74□□□□□ -0.37
SPIDR-217ENST00000522117 COBLL1Q53SF7 1204 aa12.74□□□□□ -0.37
SPIDR-217ENST00000522117 HSP90AA5PQ58FG0 334 aa12.74□□□□□ -0.37
SPIDR-217ENST00000522117 ZCCHC8Q6NZY4 707 aaKnown RBP12.74□□□□□ -0.37
SPIDR-217ENST00000522117 ELMSAN1Q6PJG2 1045 aa12.74□□□□□ -0.37
SPIDR-217ENST00000522117 DHRS4L2Q6PKH6 230 aa12.74□□□□□ -0.37
SPIDR-217ENST00000522117 RIPOR1Q6ZS17 1223 aa12.74□□□□□ -0.37
SPIDR-217ENST00000522117 OTOAQ7RTW8 1153 aa12.74□□□□□ -0.37
SPIDR-217ENST00000522117 ARPINQ7Z6K5 226 aa12.74□□□□□ -0.37
SPIDR-217ENST00000522117 LRRC6Q86X45 466 aa12.74□□□□□ -0.37
SPIDR-217ENST00000522117 PIP4K2CQ8TBX8 421 aa12.74□□□□□ -0.37
SPIDR-217ENST00000522117 ZKSCAN3Q9BRR0 538 aa12.74□□□□□ -0.37
SPIDR-217ENST00000522117 FAM47DPA6NHR8 397 aa12.74□□□□□ -0.37
SPIDR-217ENST00000522117 HAUS5O94927 633 aa12.74□□□□□ -0.37
SPIDR-217ENST00000522117 TFPTP0C1Z6 253 aa12.74□□□□□ -0.37
SPIDR-217ENST00000522117 RARBP10826 455 aa12.74□□□□□ -0.37
SPIDR-217ENST00000522117 CYP2C9P11712 490 aa12.74□□□□□ -0.37
SPIDR-217ENST00000522117 BCAP31P51572 246 aa12.74□□□□□ -0.37
SPIDR-217ENST00000522117 AQP4P55087 323 aa12.74□□□□□ -0.37
SPIDR-217ENST00000522117 TBC1D10BQ4KMP7 808 aaPredicted RBP12.74□□□□□ -0.37
SPIDR-217ENST00000522117 ARL6IP4Q66PJ3 421 aaKnown RBP12.74□□□□□ -0.37
SPIDR-217ENST00000522117 SNRNP48Q6IEG0 339 aaKnown RBP12.74□□□□□ -0.37
SPIDR-217ENST00000522117 TTC27Q6P3X3 843 aa12.74□□□□□ -0.37
SPIDR-217ENST00000522117 EPM2AIP1Q7L775 607 aaPredicted RBP12.74□□□□□ -0.37
SPIDR-217ENST00000522117 TUBB6Q9BUF5 446 aa12.74□□□□□ -0.37
SPIDR-217ENST00000522117 CRNKL1Q9BZJ0 848 aaKnown RBP12.74□□□□□ -0.37
SPIDR-217ENST00000522117 GRIP2Q9C0E4 1043 aa12.74□□□□□ -0.37
SPIDR-217ENST00000522117 DNAJC17Q9NVM6 304 aaKnown RBP12.74□□□□□ -0.37
SPIDR-217ENST00000522117 NAGPAQ9UK23 515 aa12.74□□□□□ -0.37
SPIDR-217ENST00000522117 NENFQ9UMX5 172 aa12.74□□□□□ -0.37
SPIDR-217ENST00000522117 ADAMTS3O15072 1205 aa12.73□□□□□ -0.37
SPIDR-217ENST00000522117 ATMINO43313 823 aaPredicted RBP12.73□□□□□ -0.37
SPIDR-217ENST00000522117 TCEA3O75764 348 aa12.73□□□□□ -0.37
SPIDR-217ENST00000522117 PPP1R2P41236 205 aa12.73□□□□□ -0.37
SPIDR-217ENST00000522117 ZAP70P43403 619 aa12.73□□□□□ -0.37
SPIDR-217ENST00000522117 STT3AP46977 705 aa12.73□□□□□ -0.37
SPIDR-217ENST00000522117 ANKDD1AQ495B1 522 aa12.73□□□□□ -0.37
SPIDR-217ENST00000522117 FAM209AQ5JX71 171 aa12.73□□□□□ -0.37
SPIDR-217ENST00000522117 ZNF530Q6P9A1 599 aaPredicted RBP12.73□□□□□ -0.37
SPIDR-217ENST00000522117 LMBR1LQ6UX01 489 aa12.73□□□□□ -0.37
SPIDR-217ENST00000522117 LRRC55Q6ZSA7 311 aa12.73□□□□□ -0.37
SPIDR-217ENST00000522117 NET1Q7Z628 596 aaPredicted RBP12.73□□□□□ -0.37
SPIDR-217ENST00000522117 NLRX1Q86UT6 975 aa12.73□□□□□ -0.37
SPIDR-217ENST00000522117 SRBD1Q8N5C6 995 aaKnown RBP12.73□□□□□ -0.37
SPIDR-217ENST00000522117 FAM161BQ96MY7 647 aa12.73□□□□□ -0.37
SPIDR-217ENST00000522117 TRIM9Q9C026 710 aa12.73□□□□□ -0.37
SPIDR-217ENST00000522117 ARHGEF4Q9NR80 690 aa12.73□□□□□ -0.37
SPIDR-217ENST00000522117 COMMD8Q9NX08 183 aa12.73□□□□□ -0.37
SPIDR-217ENST00000522117 AMFRQ9UKV5 643 aa12.73□□□□□ -0.37
SPIDR-217ENST00000522117 NAALADL1Q9UQQ1 740 aa12.73□□□□□ -0.37
SPIDR-217ENST00000522117 PRELID1Q9Y255 219 aa12.73□□□□□ -0.37
SPIDR-217ENST00000522117 MAGEC1O60732 1142 aa12.73□□□□□ -0.37
SPIDR-217ENST00000522117 FUCA1P04066 466 aa12.73□□□□□ -0.37
SPIDR-217ENST00000522117 FGFR1P11362 822 aa12.73□□□□□ -0.37
SPIDR-217ENST00000522117 ACTR3P61158 418 aa12.73□□□□□ -0.37
SPIDR-217ENST00000522117 PLCB3Q01970 1234 aa12.73□□□□□ -0.37
SPIDR-217ENST00000522117 FUT2Q10981 343 aa12.73□□□□□ -0.37
SPIDR-217ENST00000522117 PDK4Q16654 411 aa12.73□□□□□ -0.37
SPIDR-217ENST00000522117 LRRC24Q50LG9 513 aa12.73□□□□□ -0.37
SPIDR-217ENST00000522117 BORAQ6PGQ7 559 aa12.73□□□□□ -0.37
SPIDR-217ENST00000522117 PKD1L3Q7Z443 1732 aa12.73□□□□□ -0.37
SPIDR-217ENST00000522117 ADGRG6Q86SQ4 1221 aa12.73□□□□□ -0.37
SPIDR-217ENST00000522117 SYCE1Q8N0S2 351 aa12.73□□□□□ -0.37
SPIDR-217ENST00000522117 PYROXD1Q8WU10 500 aa12.73□□□□□ -0.37
SPIDR-217ENST00000522117 NACAP1Q9BZK3 213 aa12.73□□□□□ -0.37
SPIDR-217ENST00000522117 KLHL4Q9C0H6 718 aa12.73□□□□□ -0.37
SPIDR-217ENST00000522117 CCDC68Q9H2F9 335 aa12.73□□□□□ -0.37
SPIDR-217ENST00000522117 RPAP3Q9H6T3 665 aaPredicted RBP12.73□□□□□ -0.37
SPIDR-217ENST00000522117 NPHS2Q9NP85 383 aa12.73□□□□□ -0.37
SPIDR-217ENST00000522117 AASDHPPTQ9NRN7 309 aa12.73□□□□□ -0.37
SPIDR-217ENST00000522117 TBK1Q9UHD2 729 aa12.73□□□□□ -0.37
SPIDR-217ENST00000522117 ACTL7BQ9Y614 415 aa12.73□□□□□ -0.37
SPIDR-217ENST00000522117 CEPT1Q9Y6K0 416 aa12.73□□□□□ -0.37
SPIDR-217ENST00000522117 ARHGAP10A1A4S6 786 aa12.72□□□□□ -0.37
SPIDR-217ENST00000522117 GOLGA8TH3BQL2 631 aa12.72□□□□□ -0.37
SPIDR-217ENST00000522117 CSPG5O95196 566 aa12.72□□□□□ -0.37
SPIDR-217ENST00000522117 GOLGA8HP0CJ92 632 aa12.72□□□□□ -0.37
SPIDR-217ENST00000522117 ENDOUP21128 410 aaKnown RBP12.72□□□□□ -0.37
SPIDR-217ENST00000522117 ATICP31939 592 aa12.72□□□□□ -0.37
SPIDR-217ENST00000522117 ENTPD1P49961 510 aa12.72□□□□□ -0.37
SPIDR-217ENST00000522117 VCPP55072 806 aaKnown RBP12.72□□□□□ -0.37
SPIDR-217ENST00000522117 ZNF211Q13398 564 aaPredicted RBP12.72□□□□□ -0.37
SPIDR-217ENST00000522117 WTAPQ15007 396 aa12.72□□□□□ -0.37
SPIDR-217ENST00000522117 TXNRD1Q16881 649 aa12.72□□□□□ -0.37
SPIDR-217ENST00000522117 RNF111Q6ZNA4 994 aa12.72□□□□□ -0.37
SPIDR-217ENST00000522117 PIK3AP1Q6ZUJ8 805 aa12.72□□□□□ -0.37
SPIDR-217ENST00000522117 IRF2BP2Q7Z5L9 587 aa12.72□□□□□ -0.37
SPIDR-217ENST00000522117 ZNF410Q86VK4 478 aa12.72□□□□□ -0.37
SPIDR-217ENST00000522117 PLPP6Q8IY26 295 aa12.72□□□□□ -0.37
SPIDR-217ENST00000522117 DCLK2Q8N568 766 aa12.72□□□□□ -0.37
SPIDR-217ENST00000522117 ZNF713Q8N859 430 aaPredicted RBP12.72□□□□□ -0.37
SPIDR-217ENST00000522117 ZNF398Q8TD17 642 aa12.72□□□□□ -0.37
SPIDR-217ENST00000522117 PPP4R1Q8TF05 950 aa12.72□□□□□ -0.37
SPIDR-217ENST00000522117 FAM172AQ8WUF8 416 aa12.72□□□□□ -0.37
SPIDR-217ENST00000522117 CCDC127Q96BQ5 260 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms