RNA–Protein interactions for RNA: ENST00000508473.5

SRPK1-210, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 858 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-210ENST00000508473 PCDHB13Q9Y5F0 798 aa26.28■■□□□ 1.8
SRPK1-210ENST00000508473 PRPF6O94906 941 aaKnown RBP26.27■■□□□ 1.8
SRPK1-210ENST00000508473 SP100P23497 879 aaPredicted RBP26.27■■□□□ 1.8
SRPK1-210ENST00000508473 CASP1P29466 404 aa26.27■■□□□ 1.8
SRPK1-210ENST00000508473 PDZRN4Q6ZMN7 1036 aaPredicted RBP26.27■■□□□ 1.8
SRPK1-210ENST00000508473 SYCP3Q8IZU3 236 aa26.27■■□□□ 1.8
SRPK1-210ENST00000508473 PIK3R5Q8WYR1 880 aa26.27■■□□□ 1.8
SRPK1-210ENST00000508473 POMGNT1Q8WZA1 660 aa26.27■■□□□ 1.8
SRPK1-210ENST00000508473 BLZF1Q9H2G9 400 aa26.27■■□□□ 1.8
SRPK1-210ENST00000508473 SFXN1Q9H9B4 322 aa26.27■■□□□ 1.8
SRPK1-210ENST00000508473 AGO2Q9UKV8 859 aaKnown RBP26.27■■□□□ 1.8
SRPK1-210ENST00000508473 STYXL1Q9Y6J8 313 aa26.27■■□□□ 1.8
SRPK1-210ENST00000508473 CITO14578 2027 aa26.27■■□□□ 1.8
SRPK1-210ENST00000508473 MUC3AQ02505 3323 aa26.26■■□□□ 1.79
SRPK1-210ENST00000508473 TRAPPC3O43617 180 aa26.26■■□□□ 1.79
SRPK1-210ENST00000508473 FGFR3P22607 806 aa26.26■■□□□ 1.79
SRPK1-210ENST00000508473 TKTP29401 623 aaKnown RBP26.26■■□□□ 1.79
SRPK1-210ENST00000508473 ADSSP30520 456 aa26.26■■□□□ 1.79
SRPK1-210ENST00000508473 RPL9P32969 192 aaKnown RBP26.26■■□□□ 1.79
SRPK1-210ENST00000508473 AFMP43652 599 aa26.26■■□□□ 1.79
SRPK1-210ENST00000508473 GUCY2FP51841 1108 aa26.26■■□□□ 1.79
SRPK1-210ENST00000508473 CREMQ03060 361 aa26.26■■□□□ 1.79
SRPK1-210ENST00000508473 GLIS3Q8NEA6 775 aa26.26■■□□□ 1.79
SRPK1-210ENST00000508473 C7orf25Q9BPX7 421 aa26.26■■□□□ 1.79
SRPK1-210ENST00000508473 NUB1Q9Y5A7 615 aa26.26■■□□□ 1.79
SRPK1-210ENST00000508473 ATP6V1DQ9Y5K8 247 aa26.26■■□□□ 1.79
SRPK1-210ENST00000508473 TGM5O43548 720 aa26.25■■□□□ 1.79
SRPK1-210ENST00000508473 ALCAMQ13740 583 aa26.25■■□□□ 1.79
SRPK1-210ENST00000508473 GRAMD1CQ8IYS0 662 aa26.25■■□□□ 1.79
SRPK1-210ENST00000508473 CLSTN3Q9BQT9 956 aa26.25■■□□□ 1.79
SRPK1-210ENST00000508473 POMKQ9H5K3 350 aa26.25■■□□□ 1.79
SRPK1-210ENST00000508473 MAGEF1Q9HAY2 307 aa26.25■■□□□ 1.79
SRPK1-210ENST00000508473 SERTAD1Q9UHV2 236 aa26.25■■□□□ 1.79
SRPK1-210ENST00000508473 A0A1B0GVL5 298 aa26.24■■□□□ 1.79
SRPK1-210ENST00000508473 TULP1O00294 542 aaPredicted RBP26.24■■□□□ 1.79
SRPK1-210ENST00000508473 ADAM12O43184 909 aa26.24■■□□□ 1.79
SRPK1-210ENST00000508473 ZBTB6Q15916 424 aa26.24■■□□□ 1.79
SRPK1-210ENST00000508473 ATAT1Q5SQI0 421 aa26.24■■□□□ 1.79
SRPK1-210ENST00000508473 RIPOR3Q96MK2 946 aa26.24■■□□□ 1.79
SRPK1-210ENST00000508473 TSHZ2Q9NRE2 1034 aa26.24■■□□□ 1.79
SRPK1-210ENST00000508473 UBQLN1Q9UMX0 589 aaKnown RBP26.24■■□□□ 1.79
SRPK1-210ENST00000508473 LOC730098B7Z3J9 87 aa26.23■■□□□ 1.79
SRPK1-210ENST00000508473 PFKFB1P16118 471 aa26.23■■□□□ 1.79
SRPK1-210ENST00000508473 MCM4P33991 863 aa26.23■■□□□ 1.79
SRPK1-210ENST00000508473 MTHFRP42898 656 aa26.23■■□□□ 1.79
SRPK1-210ENST00000508473 POSTNQ15063 836 aa26.23■■□□□ 1.79
SRPK1-210ENST00000508473 JADE1Q6IE81 842 aa26.23■■□□□ 1.79
SRPK1-210ENST00000508473 PDXDC1Q6P996 788 aa26.23■■□□□ 1.79
SRPK1-210ENST00000508473 CEP57L1Q8IYX8 460 aa26.23■■□□□ 1.79
SRPK1-210ENST00000508473 SAAL1Q96ER3 474 aa26.23■■□□□ 1.79
SRPK1-210ENST00000508473 NECTIN4Q96NY8 510 aa26.23■■□□□ 1.79
SRPK1-210ENST00000508473 BDP1A6H8Y1 2624 aa26.23■■□□□ 1.79
SRPK1-210ENST00000508473 RFPL2O75678 378 aa26.22■■□□□ 1.79
SRPK1-210ENST00000508473 ADRB2P07550 413 aa26.22■■□□□ 1.79
SRPK1-210ENST00000508473 NFICP08651 508 aa26.22■■□□□ 1.79
SRPK1-210ENST00000508473 CMA1P23946 247 aa26.22■■□□□ 1.79
SRPK1-210ENST00000508473 CUL4BQ13620 913 aa26.22■■□□□ 1.79
SRPK1-210ENST00000508473 CNNM4Q6P4Q7 775 aa26.22■■□□□ 1.79
SRPK1-210ENST00000508473 LILRA6Q6PI73 481 aa26.22■■□□□ 1.79
SRPK1-210ENST00000508473 CRELD2Q6UXH1 353 aaPredicted RBP26.22■■□□□ 1.79
SRPK1-210ENST00000508473 GPR149Q86SP6 731 aa26.22■■□□□ 1.79
SRPK1-210ENST00000508473 RNF135Q8IUD6 432 aa26.22■■□□□ 1.79
SRPK1-210ENST00000508473 CD302Q8IX05 232 aa26.22■■□□□ 1.79
SRPK1-210ENST00000508473 KREMEN2Q8NCW0 462 aa26.22■■□□□ 1.79
SRPK1-210ENST00000508473 ZSWIM2Q8NEG5 633 aa26.22■■□□□ 1.79
SRPK1-210ENST00000508473 PYM1Q9BRP8 204 aaKnown RBP26.22■■□□□ 1.79
SRPK1-210ENST00000508473 FAM213AQ9BRX8 229 aa26.22■■□□□ 1.79
SRPK1-210ENST00000508473 GDPD2Q9HCC8 539 aa26.22■■□□□ 1.79
SRPK1-210ENST00000508473 DPP7Q9UHL4 492 aa26.22■■□□□ 1.79
SRPK1-210ENST00000508473 CCDC195A0A1B0GUA6 201 aa26.21■■□□□ 1.79
SRPK1-210ENST00000508473 XPOTO43592 962 aaKnown RBP26.21■■□□□ 1.79
SRPK1-210ENST00000508473 ACTN4O43707 911 aaKnown RBP26.21■■□□□ 1.79
SRPK1-210ENST00000508473 CYP3A5P20815 502 aa26.21■■□□□ 1.79
SRPK1-210ENST00000508473 LRPAP1P30533 357 aa26.21■■□□□ 1.79
SRPK1-210ENST00000508473 FAM26FQ5R3K3 315 aa26.21■■□□□ 1.79
SRPK1-210ENST00000508473 ELMSAN1Q6PJG2 1045 aa26.21■■□□□ 1.79
SRPK1-210ENST00000508473 RSPO2Q6UXX9 243 aaPredicted RBP26.21■■□□□ 1.79
SRPK1-210ENST00000508473 STXBP4Q6ZWJ1 553 aa26.21■■□□□ 1.79
SRPK1-210ENST00000508473 UNC13DQ70J99 1090 aa26.21■■□□□ 1.79
SRPK1-210ENST00000508473 NOC3LQ8WTT2 800 aaKnown RBP26.21■■□□□ 1.79
SRPK1-210ENST00000508473 CBWD1Q9BRT8 395 aa26.21■■□□□ 1.79
SRPK1-210ENST00000508473 SCAND2PQ9GZW5 306 aaPredicted RBP26.21■■□□□ 1.79
SRPK1-210ENST00000508473 PCIF1Q9H4Z3 704 aa26.21■■□□□ 1.79
SRPK1-210ENST00000508473 TMEM206Q9H813 350 aa26.21■■□□□ 1.79
SRPK1-210ENST00000508473 MTRRQ9UBK8 725 aa26.21■■□□□ 1.79
SRPK1-210ENST00000508473 PLXNA3P51805 1871 aa26.21■■□□□ 1.79
SRPK1-210ENST00000508473 VWA8A3KMH1 1905 aa26.2■■□□□ 1.79
SRPK1-210ENST00000508473 GOLGA8IPA6NC78 632 aa26.2■■□□□ 1.78
SRPK1-210ENST00000508473 GOLGA8JA6NMD2 632 aa26.2■■□□□ 1.78
SRPK1-210ENST00000508473 PI4K2BG5E9Z4 385 aa26.2■■□□□ 1.78
SRPK1-210ENST00000508473 SLFN14P0C7P3 912 aa26.2■■□□□ 1.78
SRPK1-210ENST00000508473 OR1D2P34982 312 aa26.2■■□□□ 1.78
SRPK1-210ENST00000508473 TMEM132DQ14C87 1099 aa26.2■■□□□ 1.78
SRPK1-210ENST00000508473 VARS2Q5ST30 1063 aaKnown RBP26.2■■□□□ 1.78
SRPK1-210ENST00000508473 ANKS3Q6ZW76 656 aa26.2■■□□□ 1.78
SRPK1-210ENST00000508473 BEST2Q8NFU1 509 aa26.2■■□□□ 1.78
SRPK1-210ENST00000508473 PLEKHA4Q9H4M7 779 aa26.2■■□□□ 1.78
SRPK1-210ENST00000508473 MUTYHQ9UIF7 546 aa26.2■■□□□ 1.78
SRPK1-210ENST00000508473 CDY1Q9Y6F8 540 aa26.2■■□□□ 1.78
SRPK1-210ENST00000508473 C5orf42Q9H799 3197 aa26.19■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms