RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 CDKL5O76039 1030 aa4.58□□□□□ -1.68
HMGB1P29-201ENST00000505659 ZFPL1O95159 310 aa4.58□□□□□ -1.68
HMGB1P29-201ENST00000505659 INHBEP58166 350 aa4.58□□□□□ -1.68
HMGB1P29-201ENST00000505659 ZNF280AP59817 542 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P29-201ENST00000505659 SLFN5Q08AF3 891 aa4.58□□□□□ -1.68
HMGB1P29-201ENST00000505659 MIGA2Q7L4E1 593 aa4.58□□□□□ -1.68
HMGB1P29-201ENST00000505659 PNMA8AQ86V59 439 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P29-201ENST00000505659 TMEM132CQ8N3T6 1108 aa4.58□□□□□ -1.68
HMGB1P29-201ENST00000505659 IFI44Q8TCB0 444 aa4.58□□□□□ -1.68
HMGB1P29-201ENST00000505659 SSH1Q8WYL5 1049 aa4.58□□□□□ -1.68
HMGB1P29-201ENST00000505659 NACC2Q96BF6 587 aa4.58□□□□□ -1.68
HMGB1P29-201ENST00000505659 COA7Q96BR5 231 aa4.58□□□□□ -1.68
HMGB1P29-201ENST00000505659 RNF31Q96EP0 1072 aa4.58□□□□□ -1.68
HMGB1P29-201ENST00000505659 GPATCH3Q96I76 525 aa4.58□□□□□ -1.68
HMGB1P29-201ENST00000505659 ALOXE3Q9BYJ1 711 aa4.58□□□□□ -1.68
HMGB1P29-201ENST00000505659 C11orf54Q9H0W9 315 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P29-201ENST00000505659 TDP1Q9NUW8 608 aa4.58□□□□□ -1.68
HMGB1P29-201ENST00000505659 SYBUQ9NX95 663 aa4.58□□□□□ -1.68
HMGB1P29-201ENST00000505659 HSFX1Q9UBD0 423 aa4.58□□□□□ -1.68
HMGB1P29-201ENST00000505659 GRM6O15303 877 aa4.57□□□□□ -1.68
HMGB1P29-201ENST00000505659 TEX33O43247 280 aa4.57□□□□□ -1.68
HMGB1P29-201ENST00000505659 PPFIA4O75335 1185 aa4.57□□□□□ -1.68
HMGB1P29-201ENST00000505659 ZRANB2O95218 330 aaKnown RBP eCLIP4.57□□□□□ -1.68
HMGB1P29-201ENST00000505659 HLA-DOAP06340 250 aa4.57□□□□□ -1.68
HMGB1P29-201ENST00000505659 ITGAMP11215 1152 aa4.57□□□□□ -1.68
HMGB1P29-201ENST00000505659 FCER1AP12319 257 aa4.57□□□□□ -1.68
HMGB1P29-201ENST00000505659 PLA2G5P39877 138 aa4.57□□□□□ -1.68
HMGB1P29-201ENST00000505659 SLC16A1P53985 500 aa4.57□□□□□ -1.68
HMGB1P29-201ENST00000505659 CTXN1P60606 82 aa4.57□□□□□ -1.68
HMGB1P29-201ENST00000505659 CXADRP78310 365 aa4.57□□□□□ -1.68
HMGB1P29-201ENST00000505659 CDC42EP1Q00587 391 aa4.57□□□□□ -1.68
HMGB1P29-201ENST00000505659 FOXI1Q12951 378 aa4.57□□□□□ -1.68
HMGB1P29-201ENST00000505659 SMN1Q16637 294 aaKnown RBP4.57□□□□□ -1.68
HMGB1P29-201ENST00000505659 FLYWCH1Q4VC44 716 aa4.57□□□□□ -1.68
HMGB1P29-201ENST00000505659 GPR149Q86SP6 731 aa4.57□□□□□ -1.68
HMGB1P29-201ENST00000505659 RSPH3Q86UC2 560 aa4.57□□□□□ -1.68
HMGB1P29-201ENST00000505659 LCORLQ8N3X6 602 aa4.57□□□□□ -1.68
HMGB1P29-201ENST00000505659 TBC1D15Q8TC07 691 aa4.57□□□□□ -1.68
HMGB1P29-201ENST00000505659 HDAC10Q969S8 669 aa4.57□□□□□ -1.68
HMGB1P29-201ENST00000505659 TLR10Q9BXR5 811 aa4.57□□□□□ -1.68
HMGB1P29-201ENST00000505659 RNPEPQ9H4A4 650 aa4.57□□□□□ -1.68
HMGB1P29-201ENST00000505659 CYP4F11Q9HBI6 524 aa4.57□□□□□ -1.68
HMGB1P29-201ENST00000505659 FAM30AQ9NZY2 134 aa4.57□□□□□ -1.68
HMGB1P29-201ENST00000505659 SAP30BPQ9UHR5 308 aaKnown RBP4.57□□□□□ -1.68
HMGB1P29-201ENST00000505659 PCDHB1Q9Y5F3 818 aa4.57□□□□□ -1.68
HMGB1P29-201ENST00000505659 EPN1Q9Y6I3 576 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P29-201ENST00000505659 PIPSLA2A3N6 862 aa4.56□□□□□ -1.68
HMGB1P29-201ENST00000505659 ALG1L2C9J202 215 aa4.56□□□□□ -1.68
HMGB1P29-201ENST00000505659 GPANK1O95872 356 aa4.56□□□□□ -1.68
HMGB1P29-201ENST00000505659 CKBP12277 381 aa4.56□□□□□ -1.68
HMGB1P29-201ENST00000505659 CREMQ03060 361 aa4.56□□□□□ -1.68
HMGB1P29-201ENST00000505659 UAP1L1Q3KQV9 507 aa4.56□□□□□ -1.68
HMGB1P29-201ENST00000505659 DACT2Q5SW24 774 aa4.56□□□□□ -1.68
HMGB1P29-201ENST00000505659 SLC44A3Q8N4M1 653 aa4.56□□□□□ -1.68
HMGB1P29-201ENST00000505659 MRGPRX4Q96LA9 322 aa4.56□□□□□ -1.68
HMGB1P29-201ENST00000505659 DMRTA2Q96SC8 542 aa4.56□□□□□ -1.68
HMGB1P29-201ENST00000505659 REXO4Q9GZR2 422 aaKnown RBP4.56□□□□□ -1.68
HMGB1P29-201ENST00000505659 VSX1Q9NZR4 365 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P29-201ENST00000505659 RNF181Q9P0P0 153 aa4.56□□□□□ -1.68
HMGB1P29-201ENST00000505659 PACSIN3Q9UKS6 424 aa4.56□□□□□ -1.68
HMGB1P29-201ENST00000505659 SLC45A2Q9UMX9 530 aa4.56□□□□□ -1.68
HMGB1P29-201ENST00000505659 MRFAP1Q9Y605 127 aa4.56□□□□□ -1.68
HMGB1P29-201ENST00000505659 LRRC14BA6NHZ5 514 aa4.55□□□□□ -1.68
HMGB1P29-201ENST00000505659 CD1AP06126 327 aa4.55□□□□□ -1.68
HMGB1P29-201ENST00000505659 EGR2P11161 476 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P29-201ENST00000505659 ALAS1P13196 640 aa4.55□□□□□ -1.68
HMGB1P29-201ENST00000505659 BMP5P22003 454 aa4.55□□□□□ -1.68
HMGB1P29-201ENST00000505659 GEN1Q17RS7 908 aa4.55□□□□□ -1.68
HMGB1P29-201ENST00000505659 BRDTQ58F21 947 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P29-201ENST00000505659 EFCAB2Q5VUJ9 269 aa4.55□□□□□ -1.68
HMGB1P29-201ENST00000505659 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P29-201ENST00000505659 FITM2Q8N6M3 262 aa4.55□□□□□ -1.68
HMGB1P29-201ENST00000505659 LINC00476Q8WZB0 136 aa4.55□□□□□ -1.68
HMGB1P29-201ENST00000505659 CLPTM1LQ96KA5 538 aa4.55□□□□□ -1.68
HMGB1P29-201ENST00000505659 KCNE5Q9UJ90 142 aa4.55□□□□□ -1.68
HMGB1P29-201ENST00000505659 NOX1Q9Y5S8 564 aa4.55□□□□□ -1.68
HMGB1P29-201ENST00000505659 SALL3Q9BXA9 1300 aa4.54□□□□□ -1.68
HMGB1P29-201ENST00000505659 HAUS5O94927 633 aa4.54□□□□□ -1.68
HMGB1P29-201ENST00000505659 AGFG2O95081 481 aa4.54□□□□□ -1.68
HMGB1P29-201ENST00000505659 FOSP01100 380 aaPredicted RBP4.54□□□□□ -1.68
HMGB1P29-201ENST00000505659 LMNAP02545 664 aaKnown RBP4.54□□□□□ -1.68
HMGB1P29-201ENST00000505659 TYRP1P17643 537 aa4.54□□□□□ -1.68
HMGB1P29-201ENST00000505659 FXR1P51114 621 aaKnown RBP eCLIP4.54□□□□□ -1.68
HMGB1P29-201ENST00000505659 SEC24CP53992 1094 aa4.54□□□□□ -1.68
HMGB1P29-201ENST00000505659 USP14P54578 494 aa4.54□□□□□ -1.68
HMGB1P29-201ENST00000505659 NANOS3P60323 173 aaKnown RBP4.54□□□□□ -1.68
HMGB1P29-201ENST00000505659 KRT85P78386 507 aa4.54□□□□□ -1.68
HMGB1P29-201ENST00000505659 TLE1Q04724 770 aa4.54□□□□□ -1.68
HMGB1P29-201ENST00000505659 CYP2A13Q16696 494 aa4.54□□□□□ -1.68
HMGB1P29-201ENST00000505659 PTPROQ16827 1216 aa4.54□□□□□ -1.68
HMGB1P29-201ENST00000505659 SPDYE7PQ495Y7 208 aa4.54□□□□□ -1.68
HMGB1P29-201ENST00000505659 SUPT20HQ8NEM7 779 aa4.54□□□□□ -1.68
HMGB1P29-201ENST00000505659 CAVIN3Q969G5 261 aa4.54□□□□□ -1.68
HMGB1P29-201ENST00000505659 ZG16BQ96DA0 208 aa4.54□□□□□ -1.68
HMGB1P29-201ENST00000505659 Q96MF0 132 aa4.54□□□□□ -1.68
HMGB1P29-201ENST00000505659 VRK1Q99986 396 aaPredicted RBP4.54□□□□□ -1.68
HMGB1P29-201ENST00000505659 SLC13A1Q9BZW2 595 aa4.54□□□□□ -1.68
HMGB1P29-201ENST00000505659 TOR3AQ9H497 397 aa4.54□□□□□ -1.68
HMGB1P29-201ENST00000505659 SYNPO2LQ9H987 977 aa4.54□□□□□ -1.68
HMGB1P29-201ENST00000505659 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms