RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 SERPINB12Q96P63 405 aa8.09□□□□□ -1.11
NEDD9-208ENST00000504387 P2RX7Q99572 595 aaKnown RBP8.09□□□□□ -1.11
NEDD9-208ENST00000504387 TMEM117Q9H0C3 514 aa8.09□□□□□ -1.11
NEDD9-208ENST00000504387 ZNF395Q9H8N7 513 aaPredicted RBP8.09□□□□□ -1.11
NEDD9-208ENST00000504387 TYW1Q9NV66 732 aaKnown RBP8.09□□□□□ -1.11
NEDD9-208ENST00000504387 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.09□□□□□ -1.111e-6■■■□□ 15.8
NEDD9-208ENST00000504387 CLIC5Q9NZA1 410 aa8.09□□□□□ -1.11
NEDD9-208ENST00000504387 SAE1Q9UBE0 346 aaPredicted RBP8.09□□□□□ -1.11
NEDD9-208ENST00000504387 APEX2Q9UBZ4 518 aa8.09□□□□□ -1.11
NEDD9-208ENST00000504387 RABGAP1Q9Y3P9 1069 aa8.09□□□□□ -1.11
NEDD9-208ENST00000504387 BTNL10A8MVZ5 291 aa8.09□□□□□ -1.11
NEDD9-208ENST00000504387 BHMG1C9JSJ3 638 aaPredicted RBP8.09□□□□□ -1.11
NEDD9-208ENST00000504387 H3BRJ5 948 aa8.09□□□□□ -1.11
NEDD9-208ENST00000504387 OR6B1O95007 311 aa8.09□□□□□ -1.11
NEDD9-208ENST00000504387 HLA-DOAP06340 250 aa8.09□□□□□ -1.11
NEDD9-208ENST00000504387 SKIP12755 728 aa8.09□□□□□ -1.11
NEDD9-208ENST00000504387 ATP5DP30049 168 aa8.09□□□□□ -1.11
NEDD9-208ENST00000504387 SP4Q02446 784 aa8.09□□□□□ -1.11
NEDD9-208ENST00000504387 NFIAQ12857 509 aa8.09□□□□□ -1.11
NEDD9-208ENST00000504387 GRAPQ13588 217 aa8.09□□□□□ -1.11
NEDD9-208ENST00000504387 EDRF1Q3B7T1 1238 aa8.09□□□□□ -1.11
NEDD9-208ENST00000504387 COBLL1Q53SF7 1204 aa8.09□□□□□ -1.11
NEDD9-208ENST00000504387 IZUMO2Q6UXV1 221 aa8.09□□□□□ -1.11
NEDD9-208ENST00000504387 RINLQ6ZS11 566 aa8.09□□□□□ -1.11
NEDD9-208ENST00000504387 MFN1Q8IWA4 741 aa8.09□□□□□ -1.11
NEDD9-208ENST00000504387 ANKRD35Q8N283 1001 aa8.09□□□□□ -1.11
NEDD9-208ENST00000504387 AGGF1Q8N302 714 aaeCLIP8.09□□□□□ -1.116e-8■□□□□ 10.6
NEDD9-208ENST00000504387 TEX9Q8N6V9 391 aa8.09□□□□□ -1.11
NEDD9-208ENST00000504387 GRAPLQ8TC17 118 aaPredicted RBP8.09□□□□□ -1.11
NEDD9-208ENST00000504387 ZNF333Q96JL9 665 aa8.09□□□□□ -1.11
NEDD9-208ENST00000504387 TUBGCP5Q96RT8 1024 aa8.09□□□□□ -1.11
NEDD9-208ENST00000504387 CCDC77Q9BR77 488 aa8.09□□□□□ -1.11
NEDD9-208ENST00000504387 GPR88Q9GZN0 384 aa8.09□□□□□ -1.11
NEDD9-208ENST00000504387 PREBQ9HCU5 417 aa8.09□□□□□ -1.11
NEDD9-208ENST00000504387 STOML1Q9UBI4 398 aa8.09□□□□□ -1.11
NEDD9-208ENST00000504387 SERPINB13Q9UIV8 391 aa8.09□□□□□ -1.11
NEDD9-208ENST00000504387 ZNF148Q9UQR1 794 aa8.09□□□□□ -1.11
NEDD9-208ENST00000504387 PCDHA3Q9Y5H8 950 aa8.09□□□□□ -1.11
NEDD9-208ENST00000504387 CASZ1Q86V15 1759 aa8.09□□□□□ -1.12
NEDD9-208ENST00000504387 MEI4A8MW99 385 aa8.08□□□□□ -1.12
NEDD9-208ENST00000504387 TP73O15350 636 aa8.08□□□□□ -1.12
NEDD9-208ENST00000504387 HNRNPRO43390 633 aaKnown RBP8.08□□□□□ -1.12
NEDD9-208ENST00000504387 PGM3O95394 542 aa8.08□□□□□ -1.12
NEDD9-208ENST00000504387 ESRRAP11474 423 aaPredicted RBP8.08□□□□□ -1.12
NEDD9-208ENST00000504387 CCNB1P14635 433 aa8.08□□□□□ -1.12
NEDD9-208ENST00000504387 MAPK4P31152 587 aa8.08□□□□□ -1.12
NEDD9-208ENST00000504387 VHLP40337 213 aa8.08□□□□□ -1.12
NEDD9-208ENST00000504387 MAGEA4P43358 317 aa8.08□□□□□ -1.12
NEDD9-208ENST00000504387 ATXN3P54252 364 aaPredicted RBP8.08□□□□□ -1.12
NEDD9-208ENST00000504387 SPARCL1Q14515 664 aa8.08□□□□□ -1.12
NEDD9-208ENST00000504387 PCNX4Q63HM2 1172 aa8.08□□□□□ -1.12
NEDD9-208ENST00000504387 OR52E8Q6IFG1 317 aa8.08□□□□□ -1.12
NEDD9-208ENST00000504387 TRIM74Q86UV6 250 aa8.08□□□□□ -1.12
NEDD9-208ENST00000504387 TRIM73Q86UV7 250 aa8.08□□□□□ -1.12
NEDD9-208ENST00000504387 BORCS6Q96GS4 357 aa8.08□□□□□ -1.12
NEDD9-208ENST00000504387 SNF8Q96H20 258 aa8.08□□□□□ -1.12
NEDD9-208ENST00000504387 RBM41Q96IZ5 413 aaKnown RBP8.08□□□□□ -1.12
NEDD9-208ENST00000504387 NDNQ99608 321 aa8.08□□□□□ -1.12
NEDD9-208ENST00000504387 THTPAQ9BU02 230 aa8.08□□□□□ -1.12
NEDD9-208ENST00000504387 RTFDC1Q9BY42 306 aaPredicted RBP8.08□□□□□ -1.12
NEDD9-208ENST00000504387 ANO3Q9BYT9 981 aa8.08□□□□□ -1.12
NEDD9-208ENST00000504387 FHDC1Q9C0D6 1143 aaPredicted RBP8.08□□□□□ -1.12
NEDD9-208ENST00000504387 LRMDAQ9H2I8 198 aa8.08□□□□□ -1.12
NEDD9-208ENST00000504387 KIAA1586Q9HCI6 787 aa8.08□□□□□ -1.12
NEDD9-208ENST00000504387 ETNK2Q9NVF9 386 aa8.08□□□□□ -1.12
NEDD9-208ENST00000504387 DDX18Q9NVP1 670 aaKnown RBP8.08□□□□□ -1.12
NEDD9-208ENST00000504387 MTMR4Q9NYA4 1195 aa8.08□□□□□ -1.12
NEDD9-208ENST00000504387 SLC17A7Q9P2U7 560 aa8.08□□□□□ -1.12
NEDD9-208ENST00000504387 PCYOX1Q9UHG3 505 aa8.08□□□□□ -1.12
NEDD9-208ENST00000504387 SPATA31A1Q5TZJ5 1347 aa8.08□□□□□ -1.12
NEDD9-208ENST00000504387 A0A0A6YYK5 440 aaPredicted RBP8.08□□□□□ -1.12
NEDD9-208ENST00000504387 FAM86B1E9PN63 330 aa8.08□□□□□ -1.12
NEDD9-208ENST00000504387 MAP3K7O43318 606 aa8.08□□□□□ -1.12
NEDD9-208ENST00000504387 CDH16O75309 829 aa8.08□□□□□ -1.12
NEDD9-208ENST00000504387 FAM86B2P0C5J1 330 aa8.08□□□□□ -1.12
NEDD9-208ENST00000504387 SPATA31C1P0DKV0 1188 aa8.08□□□□□ -1.12
NEDD9-208ENST00000504387 SSTR1P30872 391 aa8.08□□□□□ -1.12
NEDD9-208ENST00000504387 NRLP54845 237 aa8.08□□□□□ -1.12
NEDD9-208ENST00000504387 PPP3CAQ08209 521 aa8.08□□□□□ -1.12
NEDD9-208ENST00000504387 QRICH1Q2TAL8 776 aa8.08□□□□□ -1.12
NEDD9-208ENST00000504387 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.08□□□□□ -1.12
NEDD9-208ENST00000504387 RNF43Q68DV7 783 aa8.08□□□□□ -1.12
NEDD9-208ENST00000504387 BTNL9Q6UXG8 535 aa8.08□□□□□ -1.12
NEDD9-208ENST00000504387 C4orf50Q6ZRC1 276 aa8.08□□□□□ -1.12
NEDD9-208ENST00000504387 TRMT10CQ7L0Y3 403 aaKnown RBP8.08□□□□□ -1.12
NEDD9-208ENST00000504387 ALYREFQ86V81 257 aaKnown RBP8.08□□□□□ -1.12
NEDD9-208ENST00000504387 ZFPM1Q8IX07 1006 aa8.08□□□□□ -1.12
NEDD9-208ENST00000504387 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.08□□□□□ -1.121e-6■□□□□ 8.7
NEDD9-208ENST00000504387 CBWD1Q9BRT8 395 aa8.08□□□□□ -1.12
NEDD9-208ENST00000504387 CCDC134Q9H6E4 229 aa8.08□□□□□ -1.12
NEDD9-208ENST00000504387 DCLRE1BQ9H816 532 aa8.08□□□□□ -1.12
NEDD9-208ENST00000504387 METTL14Q9HCE5 456 aaKnown RBP8.08□□□□□ -1.12
NEDD9-208ENST00000504387 DDX4Q9NQI0 724 aaKnown RBP8.08□□□□□ -1.12
NEDD9-208ENST00000504387 TOPORSQ9NS56 1045 aaPredicted RBP8.08□□□□□ -1.12
NEDD9-208ENST00000504387 CHMP2BQ9UQN3 213 aa8.08□□□□□ -1.12
NEDD9-208ENST00000504387 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.08□□□□□ -1.12
NEDD9-208ENST00000504387 ARHGAP42A6NI28 874 aa8.08□□□□□ -1.12
NEDD9-208ENST00000504387 PDXKO00764 312 aa8.08□□□□□ -1.12
NEDD9-208ENST00000504387 PFDN1O60925 122 aa8.08□□□□□ -1.12
NEDD9-208ENST00000504387 HAUS5O94927 633 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms