RNA–Protein interactions for RNA: ENST00000504211.5

UBE2D3-217, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2 BASIC

Gene UBE2D3, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-217ENST00000504211 DCLRE1CQ96SD1 692 aaKnown RBP7.56□□□□□ -1.2
UBE2D3-217ENST00000504211 NEU1Q99519 415 aa7.56□□□□□ -1.2
UBE2D3-217ENST00000504211 CGRRF1Q99675 332 aa7.56□□□□□ -1.2
UBE2D3-217ENST00000504211 WDCPQ9H6R7 721 aa7.56□□□□□ -1.2
UBE2D3-217ENST00000504211 GOLGA6AQ9NYA3 693 aa7.56□□□□□ -1.2
UBE2D3-217ENST00000504211 GABBR1Q9UBS5 961 aa7.56□□□□□ -1.2
UBE2D3-217ENST00000504211 STXBP5LQ9Y2K9 1186 aa7.56□□□□□ -1.2
UBE2D3-217ENST00000504211 ABCC9O60706 1549 aa7.56□□□□□ -1.2
UBE2D3-217ENST00000504211 RB1CC1Q8TDY2 1594 aa7.55□□□□□ -1.2
UBE2D3-217ENST00000504211 KIAA0391O15091 583 aaKnown RBP7.55□□□□□ -1.2
UBE2D3-217ENST00000504211 SLC43A1O75387 559 aa7.55□□□□□ -1.2
UBE2D3-217ENST00000504211 TYRP14679 529 aa7.55□□□□□ -1.2
UBE2D3-217ENST00000504211 BUD31P41223 144 aaPredicted RBP7.55□□□□□ -1.2
UBE2D3-217ENST00000504211 NKX6-1P78426 367 aaPredicted RBP7.55□□□□□ -1.2
UBE2D3-217ENST00000504211 GFOD2Q3B7J2 385 aa7.55□□□□□ -1.2
UBE2D3-217ENST00000504211 AGAP9Q5VTM2 703 aa7.55□□□□□ -1.2
UBE2D3-217ENST00000504211 RHOT2Q8IXI1 618 aa7.55□□□□□ -1.2
UBE2D3-217ENST00000504211 ZBTB34Q8NCN2 500 aa7.55□□□□□ -1.2
UBE2D3-217ENST00000504211 C1orf112Q9NSG2 853 aa7.55□□□□□ -1.2
UBE2D3-217ENST00000504211 PARPBPQ9NWS1 579 aa7.55□□□□□ -1.2
UBE2D3-217ENST00000504211 JKAMPQ9P055 326 aa7.55□□□□□ -1.2
UBE2D3-217ENST00000504211 PCDHA3Q9Y5H8 950 aa7.55□□□□□ -1.2
UBE2D3-217ENST00000504211 NR2E3Q9Y5X4 410 aa7.55□□□□□ -1.2
UBE2D3-217ENST00000504211 SCRIBQ14160 1630 aa7.55□□□□□ -1.2
UBE2D3-217ENST00000504211 B3GALT2O43825 422 aa7.54□□□□□ -1.2
UBE2D3-217ENST00000504211 UBXN7O94888 489 aa7.54□□□□□ -1.2
UBE2D3-217ENST00000504211 GCSHP23434 173 aa7.54□□□□□ -1.2
UBE2D3-217ENST00000504211 SLC6A2P23975 617 aa7.54□□□□□ -1.2
UBE2D3-217ENST00000504211 PRDX5P30044 214 aa7.54□□□□□ -1.2
UBE2D3-217ENST00000504211 NRN1LQ496H8 165 aa7.54□□□□□ -1.2
UBE2D3-217ENST00000504211 MED25Q71SY5 747 aa7.54□□□□□ -1.2
UBE2D3-217ENST00000504211 OVCH2Q7RTZ1 564 aa7.54□□□□□ -1.2
UBE2D3-217ENST00000504211 FAM90A1Q86YD7 464 aa7.54□□□□□ -1.2
UBE2D3-217ENST00000504211 ZFPM1Q8IX07 1006 aa7.54□□□□□ -1.2
UBE2D3-217ENST00000504211 CAMKK1Q8N5S9 505 aa7.54□□□□□ -1.2
UBE2D3-217ENST00000504211 CACTINQ8WUQ7 758 aaKnown RBP7.54□□□□□ -1.2
UBE2D3-217ENST00000504211 C8orf48Q96LL4 319 aa7.54□□□□□ -1.2
UBE2D3-217ENST00000504211 PACSIN1Q9BY11 444 aa7.54□□□□□ -1.2
UBE2D3-217ENST00000504211 LMBRD1Q9NUN5 540 aa7.54□□□□□ -1.2
UBE2D3-217ENST00000504211 ABCF2Q9UG63 623 aa7.54□□□□□ -1.2
UBE2D3-217ENST00000504211 FEZ2Q9UHY8 353 aaPredicted RBP7.54□□□□□ -1.2
UBE2D3-217ENST00000504211 EIF2B4Q9UI10 523 aaKnown RBP7.54□□□□□ -1.2
UBE2D3-217ENST00000504211 SORCS3Q9UPU3 1222 aa7.54□□□□□ -1.2
UBE2D3-217ENST00000504211 AHRRA9YTQ3 701 aa7.53□□□□□ -1.2
UBE2D3-217ENST00000504211 CTNND1O60716 968 aaKnown RBP7.53□□□□□ -1.2
UBE2D3-217ENST00000504211 TUSC2O75896 110 aa7.53□□□□□ -1.2
UBE2D3-217ENST00000504211 RECQL4O94761 1208 aa7.53□□□□□ -1.2
UBE2D3-217ENST00000504211 ITGB1P05556 798 aa7.53□□□□□ -1.2
UBE2D3-217ENST00000504211 ATF3P18847 181 aa7.53□□□□□ -1.2
UBE2D3-217ENST00000504211 SMARCA1P28370 1054 aa7.53□□□□□ -1.2
UBE2D3-217ENST00000504211 PTTG1IPP53801 180 aa7.53□□□□□ -1.2
UBE2D3-217ENST00000504211 FLYWCH1Q4VC44 716 aa7.53□□□□□ -1.2
UBE2D3-217ENST00000504211 ZNF365Q70YC5 407 aa7.53□□□□□ -1.2
UBE2D3-217ENST00000504211 GDF7Q7Z4P5 450 aa7.53□□□□□ -1.2
UBE2D3-217ENST00000504211 C14orf80Q86SX3 495 aa7.53□□□□□ -1.2
UBE2D3-217ENST00000504211 WDR75Q8IWA0 830 aaKnown RBP7.53□□□□□ -1.2
UBE2D3-217ENST00000504211 FITM2Q8N6M3 262 aa7.53□□□□□ -1.2
UBE2D3-217ENST00000504211 PPP1R35Q8TAP8 253 aa7.53□□□□□ -1.2
UBE2D3-217ENST00000504211 KLHDC4Q8TBB5 520 aa7.53□□□□□ -1.2
UBE2D3-217ENST00000504211 SH3RF3Q8TEJ3 882 aaPredicted RBP7.53□□□□□ -1.2
UBE2D3-217ENST00000504211 GPR20Q99678 358 aa7.53□□□□□ -1.2
UBE2D3-217ENST00000504211 LRFN3Q9BTN0 628 aa7.53□□□□□ -1.2
UBE2D3-217ENST00000504211 SLC46A2Q9BY10 475 aa7.53□□□□□ -1.2
UBE2D3-217ENST00000504211 GSTO2Q9H4Y5 243 aa7.53□□□□□ -1.2
UBE2D3-217ENST00000504211 CDHR4A6H8M9 788 aa7.52□□□□□ -1.21
UBE2D3-217ENST00000504211 VSTM5A8MXK1 200 aa7.52□□□□□ -1.21
UBE2D3-217ENST00000504211 PEX11BO96011 259 aa7.52□□□□□ -1.21
UBE2D3-217ENST00000504211 HTR1BP28222 390 aa7.52□□□□□ -1.21
UBE2D3-217ENST00000504211 AGFG1P52594 562 aaKnown RBP7.52□□□□□ -1.21
UBE2D3-217ENST00000504211 RNASE9P60153 205 aaKnown RBP7.52□□□□□ -1.21
UBE2D3-217ENST00000504211 SLC25A3Q00325 362 aa7.52□□□□□ -1.21
UBE2D3-217ENST00000504211 GBX1Q14549 363 aa7.52□□□□□ -1.21
UBE2D3-217ENST00000504211 REXO4Q9GZR2 422 aaKnown RBP7.52□□□□□ -1.21
UBE2D3-217ENST00000504211 TMEM60Q9H2L4 133 aa7.52□□□□□ -1.21
UBE2D3-217ENST00000504211 GNL3LQ9NVN8 582 aaKnown RBP7.52□□□□□ -1.21
UBE2D3-217ENST00000504211 KLHL11Q9NVR0 708 aa7.52□□□□□ -1.21
UBE2D3-217ENST00000504211 PNPOQ9NVS9 261 aa7.52□□□□□ -1.21
UBE2D3-217ENST00000504211 RLIMQ9NVW2 624 aa7.52□□□□□ -1.21
UBE2D3-217ENST00000504211 A0A088AWK7 358 aa7.51□□□□□ -1.21
UBE2D3-217ENST00000504211 PRSS23O95084 383 aa7.51□□□□□ -1.21
UBE2D3-217ENST00000504211 SCAF4O95104 1147 aaKnown RBP7.51□□□□□ -1.21
UBE2D3-217ENST00000504211 C1SP09871 688 aa7.51□□□□□ -1.21
UBE2D3-217ENST00000504211 PIK3CGP48736 1102 aa7.51□□□□□ -1.21
UBE2D3-217ENST00000504211 ARHGAP29Q52LW3 1261 aa7.51□□□□□ -1.21
UBE2D3-217ENST00000504211 PDCD4Q53EL6 469 aaKnown RBP7.51□□□□□ -1.21
UBE2D3-217ENST00000504211 CCDC93Q567U6 631 aa7.51□□□□□ -1.21
UBE2D3-217ENST00000504211 MIIPQ5JXC2 388 aa7.51□□□□□ -1.21
UBE2D3-217ENST00000504211 SPRED1Q7Z699 444 aa7.51□□□□□ -1.21
UBE2D3-217ENST00000504211 PDSS2Q86YH6 399 aa7.51□□□□□ -1.21
UBE2D3-217ENST00000504211 PLBD2Q8NHP8 589 aa7.51□□□□□ -1.21
UBE2D3-217ENST00000504211 CPT1CQ8TCG5 803 aa7.51□□□□□ -1.21
UBE2D3-217ENST00000504211 NUP133Q8WUM0 1156 aa7.51□□□□□ -1.21
UBE2D3-217ENST00000504211 MTFMTQ96DP5 389 aaKnown RBP7.51□□□□□ -1.21
UBE2D3-217ENST00000504211 ZNF503Q96F45 646 aa7.51□□□□□ -1.21
UBE2D3-217ENST00000504211 SLC35A4Q96G79 324 aa7.51□□□□□ -1.21
UBE2D3-217ENST00000504211 OBP2AQ9NY56 170 aa7.51□□□□□ -1.21
UBE2D3-217ENST00000504211 UNC13AQ9UPW8 1703 aa7.51□□□□□ -1.21
UBE2D3-217ENST00000504211 GAGE12BA1L429 117 aa7.5□□□□□ -1.21
UBE2D3-217ENST00000504211 GAGE12HA6NDE8 117 aa7.5□□□□□ -1.21
UBE2D3-217ENST00000504211 MARCH11A6NNE9 402 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms