RNA–Protein interactions for RNA: ENST00000492650.1

VPS36-205, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 5

Gene VPS36, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-205ENST00000492650 USP25Q9UHP3 1055 aa4.5□□□□□ -1.69
VPS36-205ENST00000492650 RUVBL1Q9Y265 456 aaKnown RBP4.5□□□□□ -1.69
VPS36-205ENST00000492650 SIK3Q9Y2K2 1263 aa4.5□□□□□ -1.69
VPS36-205ENST00000492650 KAT6AQ92794 2004 aa4.5□□□□□ -1.69
VPS36-205ENST00000492650 GPR32O75388 356 aa4.49□□□□□ -1.69
VPS36-205ENST00000492650 ALAS1P13196 640 aa4.49□□□□□ -1.69
VPS36-205ENST00000492650 PCSK1P29120 753 aa4.49□□□□□ -1.69
VPS36-205ENST00000492650 ZNF169Q14929 603 aaPredicted RBP4.49□□□□□ -1.69
VPS36-205ENST00000492650 SEPT2Q15019 361 aa4.49□□□□□ -1.69
VPS36-205ENST00000492650 ZKSCAN2Q63HK3 967 aa4.49□□□□□ -1.69
VPS36-205ENST00000492650 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.49□□□□□ -1.69
VPS36-205ENST00000492650 WDR66Q8TBY9 1149 aa4.49□□□□□ -1.69
VPS36-205ENST00000492650 CASKIN2Q8WXE0 1202 aa4.49□□□□□ -1.69
VPS36-205ENST00000492650 NACC2Q96BF6 587 aa4.49□□□□□ -1.69
VPS36-205ENST00000492650 CYFIP2Q96F07 1278 aa4.49□□□□□ -1.69
VPS36-205ENST00000492650 MARS2Q96GW9 593 aaKnown RBP4.49□□□□□ -1.69
VPS36-205ENST00000492650 AIFM2Q9BRQ8 373 aa4.49□□□□□ -1.69
VPS36-205ENST00000492650 GSTO2Q9H4Y5 243 aa4.49□□□□□ -1.69
VPS36-205ENST00000492650 CCM2LQ9NUG4 571 aaPredicted RBP4.49□□□□□ -1.69
VPS36-205ENST00000492650 TMEM74BQ9NUR3 256 aa4.49□□□□□ -1.69
VPS36-205ENST00000492650 FAM30AQ9NZY2 134 aa4.49□□□□□ -1.69
VPS36-205ENST00000492650 KCNE5Q9UJ90 142 aa4.49□□□□□ -1.69
VPS36-205ENST00000492650 DMTF1Q9Y222 760 aa4.49□□□□□ -1.69
VPS36-205ENST00000492650 TMA7Q9Y2S6 64 aaKnown RBP4.49□□□□□ -1.69
VPS36-205ENST00000492650 TCRBV7S2A1N4TA0A589 114 aa4.48□□□□□ -1.69
VPS36-205ENST00000492650 CCDC78A2IDD5 438 aa4.48□□□□□ -1.69
VPS36-205ENST00000492650 PRKD3O94806 890 aa4.48□□□□□ -1.69
VPS36-205ENST00000492650 CLSTN1O94985 981 aa4.48□□□□□ -1.69
VPS36-205ENST00000492650 SLC6A9P48067 706 aa4.48□□□□□ -1.69
VPS36-205ENST00000492650 SIM1P81133 766 aaPredicted RBP4.48□□□□□ -1.69
VPS36-205ENST00000492650 MRPS35P82673 323 aaKnown RBP4.48□□□□□ -1.69
VPS36-205ENST00000492650 CREMQ03060 361 aa4.48□□□□□ -1.69
VPS36-205ENST00000492650 MGAT2Q10469 447 aa4.48□□□□□ -1.69
VPS36-205ENST00000492650 CYP2A13Q16696 494 aa4.48□□□□□ -1.69
VPS36-205ENST00000492650 LHFPL2Q6ZUX7 228 aa4.48□□□□□ -1.69
VPS36-205ENST00000492650 SEM1Q6ZVN7 128 aa4.48□□□□□ -1.69
VPS36-205ENST00000492650 COLGALT2Q8IYK4 626 aa4.48□□□□□ -1.69
VPS36-205ENST00000492650 FITM2Q8N6M3 262 aa4.48□□□□□ -1.69
VPS36-205ENST00000492650 PPM1NQ8N819 430 aa4.48□□□□□ -1.69
VPS36-205ENST00000492650 SLC2A13Q96QE2 648 aa4.48□□□□□ -1.69
VPS36-205ENST00000492650 PNKPQ96T60 521 aa4.48□□□□□ -1.69
VPS36-205ENST00000492650 MANSC1Q9H8J5 431 aa4.48□□□□□ -1.69
VPS36-205ENST00000492650 WASHC2AQ641Q2 1341 aa4.47□□□□□ -1.69
VPS36-205ENST00000492650 ANKRD62A6NC57 917 aa4.47□□□□□ -1.69
VPS36-205ENST00000492650 FAM171A2A8MVW0 826 aa4.47□□□□□ -1.69
VPS36-205ENST00000492650 KIAA0391O15091 583 aaKnown RBP4.47□□□□□ -1.69
VPS36-205ENST00000492650 EYA4O95677 639 aa4.47□□□□□ -1.69
VPS36-205ENST00000492650 C1RP00736 705 aa4.47□□□□□ -1.69
VPS36-205ENST00000492650 DDCP20711 480 aa4.47□□□□□ -1.69
VPS36-205ENST00000492650 RARRES1P49788 294 aa4.47□□□□□ -1.69
VPS36-205ENST00000492650 NOMO3P69849 1222 aa4.47□□□□□ -1.69
VPS36-205ENST00000492650 NOMO2Q5JPE7 1267 aa4.47□□□□□ -1.69
VPS36-205ENST00000492650 SP5Q6BEB4 398 aaPredicted RBP4.47□□□□□ -1.69
VPS36-205ENST00000492650 SDE2Q6IQ49 451 aa4.47□□□□□ -1.69
VPS36-205ENST00000492650 ARHGEF25Q86VW2 580 aa4.47□□□□□ -1.69
VPS36-205ENST00000492650 TBC1D15Q8TC07 691 aa4.47□□□□□ -1.69
VPS36-205ENST00000492650 FUBP1Q96AE4 644 aaKnown RBP4.47□□□□□ -1.69
VPS36-205ENST00000492650 C7orf25Q9BPX7 421 aa4.47□□□□□ -1.69
VPS36-205ENST00000492650 LRFN3Q9BTN0 628 aa4.47□□□□□ -1.69
VPS36-205ENST00000492650 UNKLQ9H9P5 680 aaKnown RBP4.47□□□□□ -1.69
VPS36-205ENST00000492650 MYBBP1AQ9BQG0 1328 aaKnown RBP4.46□□□□□ -1.69
VPS36-205ENST00000492650 CDHR4A6H8M9 788 aa4.46□□□□□ -1.7
VPS36-205ENST00000492650 GPR39O43194 453 aa4.46□□□□□ -1.7
VPS36-205ENST00000492650 IGLV2-14P01704 120 aa4.46□□□□□ -1.7
VPS36-205ENST00000492650 AMY1AP04745 511 aa4.46□□□□□ -1.7
VPS36-205ENST00000492650 MTNR1BP49286 362 aa4.46□□□□□ -1.7
VPS36-205ENST00000492650 VAV2P52735 878 aa4.46□□□□□ -1.7
VPS36-205ENST00000492650 MTM1Q13496 603 aa4.46□□□□□ -1.7
VPS36-205ENST00000492650 CLUL1Q15846 466 aa4.46□□□□□ -1.7
VPS36-205ENST00000492650 ATP2B3Q16720 1220 aa4.46□□□□□ -1.7
VPS36-205ENST00000492650 COLEC12Q5KU26 742 aa4.46□□□□□ -1.7
VPS36-205ENST00000492650 ZNF362Q5T0B9 420 aaPredicted RBP4.46□□□□□ -1.7
VPS36-205ENST00000492650 RNF219Q5W0B1 726 aaPredicted RBP4.46□□□□□ -1.7
VPS36-205ENST00000492650 GIMAP6Q6P9H5 292 aa4.46□□□□□ -1.7
VPS36-205ENST00000492650 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.46□□□□□ -1.7
VPS36-205ENST00000492650 SPATS2Q86XZ4 545 aaKnown RBP4.46□□□□□ -1.7
VPS36-205ENST00000492650 RHOT1Q8IXI2 618 aa4.46□□□□□ -1.7
VPS36-205ENST00000492650 AMOTL1Q8IY63 956 aa4.46□□□□□ -1.7
VPS36-205ENST00000492650 ZGPATQ8N5A5 531 aaKnown RBP4.46□□□□□ -1.7
VPS36-205ENST00000492650 FAM98AQ8NCA5 519 aaKnown RBP4.46□□□□□ -1.7
VPS36-205ENST00000492650 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.46□□□□□ -1.7
VPS36-205ENST00000492650 OR2I1PQ8NGU4 316 aa4.46□□□□□ -1.7
VPS36-205ENST00000492650 ATL2Q8NHH9 583 aa4.46□□□□□ -1.7
VPS36-205ENST00000492650 ACTRT2Q8TDY3 377 aa4.46□□□□□ -1.7
VPS36-205ENST00000492650 ZNF384Q8TF68 577 aa4.46□□□□□ -1.7
VPS36-205ENST00000492650 COG1Q8WTW3 980 aa4.46□□□□□ -1.7
VPS36-205ENST00000492650 NUP133Q8WUM0 1156 aa4.46□□□□□ -1.7
VPS36-205ENST00000492650 DPF2Q92785 391 aa4.46□□□□□ -1.7
VPS36-205ENST00000492650 INTUQ9ULD6 942 aa4.46□□□□□ -1.7
VPS36-205ENST00000492650 GPR45Q9Y5Y3 372 aa4.46□□□□□ -1.7
VPS36-205ENST00000492650 TRGV11A0A075B6L2 103 aa4.45□□□□□ -1.7
VPS36-205ENST00000492650 MYADML2A6NDP7 307 aa4.45□□□□□ -1.7
VPS36-205ENST00000492650 GEN1Q17RS7 908 aa4.45□□□□□ -1.7
VPS36-205ENST00000492650 MED15Q96RN5 788 aa4.45□□□□□ -1.7
VPS36-205ENST00000492650 HEPHQ9BQS7 1158 aa4.45□□□□□ -1.7
VPS36-205ENST00000492650 ALG13Q9NP73 1137 aaKnown RBP4.45□□□□□ -1.7
VPS36-205ENST00000492650 KCTD5Q9NXV2 234 aa4.45□□□□□ -1.7
VPS36-205ENST00000492650 HSFX1Q9UBD0 423 aa4.45□□□□□ -1.7
VPS36-205ENST00000492650 ARHGEF17Q96PE2 2063 aaPredicted RBP4.45□□□□□ -1.7
VPS36-205ENST00000492650 ARID4BQ4LE39 1312 aaPredicted RBP4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms