RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 ABCB11O95342 1321 aa6.16□□□□□ -1.42
PTPN4-210ENST00000485247 ZFYVE26Q68DK2 2539 aa6.16□□□□□ -1.42
PTPN4-210ENST00000485247 MYH7P12883 1935 aa6.15□□□□□ -1.42
PTPN4-210ENST00000485247 M0QZ92 97 aa6.15□□□□□ -1.42
PTPN4-210ENST00000485247 ENC1O14682 589 aa6.15□□□□□ -1.42
PTPN4-210ENST00000485247 TBC1D4O60343 1298 aa6.15□□□□□ -1.42
PTPN4-210ENST00000485247 MGEA5O60502 916 aa6.15□□□□□ -1.42
PTPN4-210ENST00000485247 N4BP1O75113 896 aaKnown RBP6.15□□□□□ -1.42
PTPN4-210ENST00000485247 FBXO24O75426 580 aa6.15□□□□□ -1.42
PTPN4-210ENST00000485247 CXCL14O95715 111 aa6.15□□□□□ -1.42
PTPN4-210ENST00000485247 MARK3P27448 753 aa6.15□□□□□ -1.42
PTPN4-210ENST00000485247 GBP2P32456 591 aaPredicted RBP6.15□□□□□ -1.42
PTPN4-210ENST00000485247 IGBP1P78318 339 aa6.15□□□□□ -1.42
PTPN4-210ENST00000485247 PPP2R3AQ06190 1150 aa6.15□□□□□ -1.42
PTPN4-210ENST00000485247 RING1Q06587 406 aa6.15□□□□□ -1.42
PTPN4-210ENST00000485247 ZNF252P-AS1Q0IIN9 211 aa6.15□□□□□ -1.42
PTPN4-210ENST00000485247 PPFIA1Q13136 1202 aa6.15□□□□□ -1.42
PTPN4-210ENST00000485247 PTPN14Q15678 1187 aa6.15□□□□□ -1.42
PTPN4-210ENST00000485247 TMEM266Q2M3C6 531 aa6.15□□□□□ -1.42
PTPN4-210ENST00000485247 LETM2Q2VYF4 491 aa6.15□□□□□ -1.42
PTPN4-210ENST00000485247 RRP12Q5JTH9 1297 aaKnown RBP6.15□□□□□ -1.42
PTPN4-210ENST00000485247 DCLRE1AQ6PJP8 1040 aa6.15□□□□□ -1.42
PTPN4-210ENST00000485247 TSSK4Q6SA08 328 aa6.15□□□□□ -1.42
PTPN4-210ENST00000485247 METTL7BQ6UX53 244 aa6.15□□□□□ -1.42
PTPN4-210ENST00000485247 UNQ6494/PRO21346Q6UXR6 183 aa6.15□□□□□ -1.42
PTPN4-210ENST00000485247 LRRC55Q6ZSA7 311 aa6.15□□□□□ -1.42
PTPN4-210ENST00000485247 ZNF765Q7L2R6 523 aa6.15□□□□□ -1.42
PTPN4-210ENST00000485247 GPR149Q86SP6 731 aa6.15□□□□□ -1.42
PTPN4-210ENST00000485247 VSIG10LQ86VR7 867 aa6.15□□□□□ -1.42
PTPN4-210ENST00000485247 ITPRIPQ8IWB1 547 aa6.15□□□□□ -1.42
PTPN4-210ENST00000485247 ZBTB44Q8NCP5 570 aa6.15□□□□□ -1.42
PTPN4-210ENST00000485247 ST13P5Q8NFI4 369 aaPredicted RBP6.15□□□□□ -1.42
PTPN4-210ENST00000485247 KCNB2Q92953 911 aa6.15□□□□□ -1.42
PTPN4-210ENST00000485247 DISC1Q9NRI5 854 aa6.15□□□□□ -1.42
PTPN4-210ENST00000485247 TOMM22Q9NS69 142 aa6.15□□□□□ -1.42
PTPN4-210ENST00000485247 ZSCAN32Q9NX65 697 aa6.15□□□□□ -1.42
PTPN4-210ENST00000485247 SPG21Q9NZD8 308 aa6.15□□□□□ -1.42
PTPN4-210ENST00000485247 FBXO4Q9UKT5 387 aa6.15□□□□□ -1.42
PTPN4-210ENST00000485247 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.15□□□□□ -1.42
PTPN4-210ENST00000485247 MRPL11Q9Y3B7 192 aaKnown RBP6.15□□□□□ -1.42
PTPN4-210ENST00000485247 FNDC1Q4ZHG4 1894 aaPredicted RBP6.15□□□□□ -1.43
PTPN4-210ENST00000485247 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.14□□□□□ -1.43
PTPN4-210ENST00000485247 DENND3A2RUS2 1198 aa6.14□□□□□ -1.43
PTPN4-210ENST00000485247 RNF113AO15541 343 aaKnown RBP6.14□□□□□ -1.43
PTPN4-210ENST00000485247 ANP32CO43423 234 aa6.14□□□□□ -1.43
PTPN4-210ENST00000485247 PAGE1O75459 146 aa6.14□□□□□ -1.43
PTPN4-210ENST00000485247 NME2P22392 152 aa6.14□□□□□ -1.43
PTPN4-210ENST00000485247 ARNTP27540 789 aa6.14□□□□□ -1.43
PTPN4-210ENST00000485247 HOXA13P31271 388 aaPredicted RBP6.14□□□□□ -1.43
PTPN4-210ENST00000485247 PPM1AP35813 382 aa6.14□□□□□ -1.43
PTPN4-210ENST00000485247 NEDD9Q14511 834 aa6.14□□□□□ -1.43
PTPN4-210ENST00000485247 PGM5Q15124 567 aa6.14□□□□□ -1.43
PTPN4-210ENST00000485247 MARCH8Q5T0T0 291 aa6.14□□□□□ -1.43
PTPN4-210ENST00000485247 ZKSCAN2Q63HK3 967 aa6.14□□□□□ -1.43
PTPN4-210ENST00000485247 IL31Q6EBC2 164 aa6.14□□□□□ -1.43
PTPN4-210ENST00000485247 ALG1LQ6GMV1 187 aa6.14□□□□□ -1.43
PTPN4-210ENST00000485247 KBTBD3Q8NAB2 608 aa6.14□□□□□ -1.43
PTPN4-210ENST00000485247 SLC22A17Q8WUG5 538 aa6.14□□□□□ -1.43
PTPN4-210ENST00000485247 AUTS2Q8WXX7 1259 aa6.14□□□□□ -1.43
PTPN4-210ENST00000485247 DDX1Q92499 740 aaKnown RBP6.14□□□□□ -1.43
PTPN4-210ENST00000485247 GLG1Q92896 1179 aa6.14□□□□□ -1.43
PTPN4-210ENST00000485247 ZNF558Q96NG5 402 aa6.14□□□□□ -1.43
PTPN4-210ENST00000485247 SEC62Q99442 399 aaKnown RBP6.14□□□□□ -1.43
PTPN4-210ENST00000485247 ADAM2Q99965 735 aa6.14□□□□□ -1.43
PTPN4-210ENST00000485247 KRTAP9-2Q9BYQ4 174 aa6.14□□□□□ -1.43
PTPN4-210ENST00000485247 MAF1Q9H063 256 aa6.14□□□□□ -1.43
PTPN4-210ENST00000485247 SFXN1Q9H9B4 322 aa6.14□□□□□ -1.43
PTPN4-210ENST00000485247 SEMA4GQ9NTN9 838 aa6.14□□□□□ -1.43
PTPN4-210ENST00000485247 CACNA2D2Q9NY47 1150 aa6.14□□□□□ -1.43
PTPN4-210ENST00000485247 GINS2Q9Y248 185 aa6.14□□□□□ -1.43
PTPN4-210ENST00000485247 MTF2Q9Y483 593 aaPredicted RBP6.14□□□□□ -1.43
PTPN4-210ENST00000485247 TRPV2Q9Y5S1 764 aa6.14□□□□□ -1.43
PTPN4-210ENST00000485247 SQORQ9Y6N5 450 aa6.14□□□□□ -1.43
PTPN4-210ENST00000485247 IGSF9BQ9UPX0 1349 aa6.14□□□□□ -1.43
PTPN4-210ENST00000485247 ASPMQ8IZT6 3477 aa6.13□□□□□ -1.43
PTPN4-210ENST00000485247 MBLAC1A4D2B0 266 aaPredicted RBP6.13□□□□□ -1.43
PTPN4-210ENST00000485247 SRRM3A6NNA2 597 aaPredicted RBP6.13□□□□□ -1.43
PTPN4-210ENST00000485247 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.13□□□□□ -1.43
PTPN4-210ENST00000485247 C9IYK1 514 aa6.13□□□□□ -1.43
PTPN4-210ENST00000485247 NT5C1B-RDH14C9J2C7 533 aa6.13□□□□□ -1.43
PTPN4-210ENST00000485247 CYP26A1O43174 497 aa6.13□□□□□ -1.43
PTPN4-210ENST00000485247 DHX16O60231 1041 aaKnown RBP6.13□□□□□ -1.43
PTPN4-210ENST00000485247 SNHG28P0DPA3 235 aa6.13□□□□□ -1.43
PTPN4-210ENST00000485247 NCLP19338 710 aaKnown RBP6.13□□□□□ -1.43
PTPN4-210ENST00000485247 BMP6P22004 513 aa6.13□□□□□ -1.43
PTPN4-210ENST00000485247 CCND2P30279 289 aa6.13□□□□□ -1.43
PTPN4-210ENST00000485247 GSTT1P30711 240 aa6.13□□□□□ -1.43
PTPN4-210ENST00000485247 TCF7P36402 384 aaPredicted RBP6.13□□□□□ -1.43
PTPN4-210ENST00000485247 METAP2P50579 478 aaKnown RBP eCLIP6.13□□□□□ -1.43
PTPN4-210ENST00000485247 HSD17B4P51659 736 aa6.13□□□□□ -1.43
PTPN4-210ENST00000485247 STARD6P59095 220 aa6.13□□□□□ -1.43
PTPN4-210ENST00000485247 SNW1Q13573 536 aaKnown RBP6.13□□□□□ -1.43
PTPN4-210ENST00000485247 BMS1Q14692 1282 aaKnown RBP6.13□□□□□ -1.43
PTPN4-210ENST00000485247 UBXN2BQ14CS0 331 aa6.13□□□□□ -1.43
PTPN4-210ENST00000485247 QRICH1Q2TAL8 776 aa6.13□□□□□ -1.43
PTPN4-210ENST00000485247 MCTP1Q6DN14 999 aa6.13□□□□□ -1.43
PTPN4-210ENST00000485247 STOX1Q6ZVD7 989 aa6.13□□□□□ -1.43
PTPN4-210ENST00000485247 SLC24A5Q71RS6 500 aa6.13□□□□□ -1.43
PTPN4-210ENST00000485247 FTSJ3Q8IY81 847 aaKnown RBP6.13□□□□□ -1.43
PTPN4-210ENST00000485247 ADGRF4Q8IZF3 695 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms