RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 FGFBP2Q9BYJ0 223 aa11.99□□□□□ -0.49
SMPD4-218ENST00000482171 OLFML3Q9NRN5 406 aa11.99□□□□□ -0.49
SMPD4-218ENST00000482171 SCOCQ9UIL1 159 aa11.99□□□□□ -0.49
SMPD4-218ENST00000482171 A8MXQ7 604 aa11.98□□□□□ -0.49
SMPD4-218ENST00000482171 RAD51CO43502 376 aa11.98□□□□□ -0.49
SMPD4-218ENST00000482171 SGPL1O95470 568 aa11.98□□□□□ -0.49
SMPD4-218ENST00000482171 ITKQ08881 620 aa11.98□□□□□ -0.49
SMPD4-218ENST00000482171 SLC35G1Q2M3R5 365 aa11.98□□□□□ -0.49
SMPD4-218ENST00000482171 SPOPLQ6IQ16 392 aa11.98□□□□□ -0.49
SMPD4-218ENST00000482171 DLK2Q6UY11 383 aa11.98□□□□□ -0.49
SMPD4-218ENST00000482171 C4orf19Q8IY42 314 aa11.98□□□□□ -0.49
SMPD4-218ENST00000482171 GPC2Q8N158 579 aa11.98□□□□□ -0.49
SMPD4-218ENST00000482171 SREK1Q8WXA9 508 aaKnown RBP11.98□□□□□ -0.49
SMPD4-218ENST00000482171 TXLNGQ9NUQ3 528 aa11.98□□□□□ -0.49
SMPD4-218ENST00000482171 ERAP1Q9NZ08 941 aa11.98□□□□□ -0.49
SMPD4-218ENST00000482171 ALG6Q9Y672 507 aa11.98□□□□□ -0.49
SMPD4-218ENST00000482171 C5P01031 1676 aa11.98□□□□□ -0.49
SMPD4-218ENST00000482171 GRAP2O75791 330 aa11.98□□□□□ -0.49
SMPD4-218ENST00000482171 MSH2P43246 934 aa11.98□□□□□ -0.49
SMPD4-218ENST00000482171 KCNJ1P48048 391 aa11.98□□□□□ -0.49
SMPD4-218ENST00000482171 SLMAPQ14BN4 828 aa11.98□□□□□ -0.49
SMPD4-218ENST00000482171 FIGNQ5HY92 759 aa11.98□□□□□ -0.49
SMPD4-218ENST00000482171 CCDC137Q6PK04 289 aaKnown RBP11.98□□□□□ -0.49
SMPD4-218ENST00000482171 TEX2Q8IWB9 1127 aa11.98□□□□□ -0.49
SMPD4-218ENST00000482171 TMEM117Q9H0C3 514 aa11.98□□□□□ -0.49
SMPD4-218ENST00000482171 GRID2IPA4D2P6 1211 aa11.98□□□□□ -0.49
SMPD4-218ENST00000482171 HUS1O60921 280 aa11.98□□□□□ -0.49
SMPD4-218ENST00000482171 PSMD10O75832 226 aa11.98□□□□□ -0.49
SMPD4-218ENST00000482171 PMS2P54278 862 aa11.98□□□□□ -0.49
SMPD4-218ENST00000482171 LMNB2Q03252 620 aa11.98□□□□□ -0.49
SMPD4-218ENST00000482171 DRP2Q13474 957 aa11.98□□□□□ -0.49
SMPD4-218ENST00000482171 MTM1Q13496 603 aa11.98□□□□□ -0.49
SMPD4-218ENST00000482171 GLRA4Q5JXX5 417 aa11.98□□□□□ -0.49
SMPD4-218ENST00000482171 ENOSF1Q7L5Y1 443 aa11.98□□□□□ -0.49
SMPD4-218ENST00000482171 SPATA20Q8TB22 786 aa11.98□□□□□ -0.49
SMPD4-218ENST00000482171 MDM1Q8TC05 714 aa11.98□□□□□ -0.49
SMPD4-218ENST00000482171 SLC20A1Q8WUM9 679 aa11.98□□□□□ -0.49
SMPD4-218ENST00000482171 SLC35C1Q96A29 364 aa11.98□□□□□ -0.49
SMPD4-218ENST00000482171 CCDC97Q96F63 343 aaPredicted RBP11.98□□□□□ -0.49
SMPD4-218ENST00000482171 CELF4Q9BZC1 486 aaKnown RBP11.98□□□□□ -0.49
SMPD4-218ENST00000482171 ASCC2Q9H1I8 757 aaPredicted RBP11.98□□□□□ -0.49
SMPD4-218ENST00000482171 ECT2Q9H8V3 914 aa11.98□□□□□ -0.49
SMPD4-218ENST00000482171 OSGEPQ9NPF4 335 aa11.98□□□□□ -0.49
SMPD4-218ENST00000482171 I3L4J1 428 aa11.97□□□□□ -0.49
SMPD4-218ENST00000482171 RNF225M0QZC1 329 aaPredicted RBP11.97□□□□□ -0.49
SMPD4-218ENST00000482171 PDGFRBP09619 1106 aa11.97□□□□□ -0.49
SMPD4-218ENST00000482171 COMTP21964 271 aa11.97□□□□□ -0.49
SMPD4-218ENST00000482171 SMAD1Q15797 465 aaKnown RBP11.97□□□□□ -0.49
SMPD4-218ENST00000482171 SRRM1Q8IYB3 904 aaKnown RBP11.97□□□□□ -0.49
SMPD4-218ENST00000482171 BEST2Q8NFU1 509 aa11.97□□□□□ -0.49
SMPD4-218ENST00000482171 NLGN2Q8NFZ4 835 aa11.97□□□□□ -0.49
SMPD4-218ENST00000482171 CCDC110Q8TBZ0 833 aa11.97□□□□□ -0.49
SMPD4-218ENST00000482171 FAM84AQ96KN4 292 aa11.97□□□□□ -0.49
SMPD4-218ENST00000482171 ROBO3Q96MS0 1386 aa11.97□□□□□ -0.49
SMPD4-218ENST00000482171 CALB1P05937 261 aa11.97□□□□□ -0.49
SMPD4-218ENST00000482171 CETPP11597 493 aa11.97□□□□□ -0.49
SMPD4-218ENST00000482171 ARL4AP40617 200 aa11.97□□□□□ -0.49
SMPD4-218ENST00000482171 RCN2Q14257 317 aa11.97□□□□□ -0.49
SMPD4-218ENST00000482171 IER5Q5VY09 327 aa11.97□□□□□ -0.49
SMPD4-218ENST00000482171 MTMR8Q96EF0 704 aa11.97□□□□□ -0.49
SMPD4-218ENST00000482171 FAM49BQ9NUQ9 324 aa11.97□□□□□ -0.49
SMPD4-218ENST00000482171 CPA4Q9UI42 421 aa11.97□□□□□ -0.49
SMPD4-218ENST00000482171 EXTL3O43909 919 aa11.97□□□□□ -0.49
SMPD4-218ENST00000482171 HBP1O60381 514 aa11.97□□□□□ -0.49
SMPD4-218ENST00000482171 VTNP04004 478 aa11.97□□□□□ -0.49
SMPD4-218ENST00000482171 SKIP12755 728 aa11.97□□□□□ -0.49
SMPD4-218ENST00000482171 SYCP2LQ5T4T6 812 aa11.97□□□□□ -0.49
SMPD4-218ENST00000482171 PAPD7Q5XG87 772 aaKnown RBP11.97□□□□□ -0.49
SMPD4-218ENST00000482171 SV2AQ7L0J3 742 aa11.97□□□□□ -0.49
SMPD4-218ENST00000482171 KIF2BQ8N4N8 673 aa11.97□□□□□ -0.49
SMPD4-218ENST00000482171 BBOF1Q8ND07 529 aa11.97□□□□□ -0.49
SMPD4-218ENST00000482171 RDM1Q8NG50 284 aa11.97□□□□□ -0.49
SMPD4-218ENST00000482171 ETNPPLQ8TBG4 499 aa11.97□□□□□ -0.49
SMPD4-218ENST00000482171 P3H4Q92791 437 aa11.97□□□□□ -0.49
SMPD4-218ENST00000482171 ZBTB45Q96K62 511 aaPredicted RBP11.97□□□□□ -0.49
SMPD4-218ENST00000482171 PARK7Q99497 189 aaKnown RBP11.97□□□□□ -0.49
SMPD4-218ENST00000482171 MTMR12Q9C0I1 747 aa11.97□□□□□ -0.49
SMPD4-218ENST00000482171 ZSCAN5CA6NGD5 496 aaPredicted RBP11.97□□□□□ -0.49
SMPD4-218ENST00000482171 SKAP2O75563 359 aaPredicted RBP11.97□□□□□ -0.49
SMPD4-218ENST00000482171 SPATA31C1P0DKV0 1188 aa11.97□□□□□ -0.49
SMPD4-218ENST00000482171 CYP2C9P11712 490 aa11.97□□□□□ -0.49
SMPD4-218ENST00000482171 CA4P22748 312 aa11.97□□□□□ -0.49
SMPD4-218ENST00000482171 RFC5P40937 340 aa11.97□□□□□ -0.49
SMPD4-218ENST00000482171 PSMD6Q15008 389 aa11.97□□□□□ -0.49
SMPD4-218ENST00000482171 ZNF507Q8TCN5 953 aa11.97□□□□□ -0.49
SMPD4-218ENST00000482171 CLMNQ96JQ2 1002 aa11.97□□□□□ -0.49
SMPD4-218ENST00000482171 ADAM33Q9BZ11 813 aa11.97□□□□□ -0.49
SMPD4-218ENST00000482171 RIPK3Q9Y572 518 aa11.97□□□□□ -0.49
SMPD4-218ENST00000482171 EGFRP00533 1210 aa11.96□□□□□ -0.49
SMPD4-218ENST00000482171 CHN1P15882 459 aa11.96□□□□□ -0.49
SMPD4-218ENST00000482171 BRD2P25440 801 aaKnown RBP11.96□□□□□ -0.49
SMPD4-218ENST00000482171 PHBP35232 272 aa11.96□□□□□ -0.49
SMPD4-218ENST00000482171 MAP7Q14244 749 aa11.96□□□□□ -0.49
SMPD4-218ENST00000482171 KIZQ2M2Z5 673 aa11.96□□□□□ -0.49
SMPD4-218ENST00000482171 C1orf186Q6ZWK4 172 aa11.96□□□□□ -0.49
SMPD4-218ENST00000482171 ZC3H18Q86VM9 953 aaKnown RBP11.96□□□□□ -0.49
SMPD4-218ENST00000482171 METTL23Q86XA0 190 aa11.96□□□□□ -0.49
SMPD4-218ENST00000482171 CCDC60Q8IWA6 550 aaPredicted RBP11.96□□□□□ -0.49
SMPD4-218ENST00000482171 NSMCE1Q8WV22 266 aa11.96□□□□□ -0.49
SMPD4-218ENST00000482171 AFG1LQ8WV93 481 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms