RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 GDF11O95390 407 aa5.69□□□□□ -1.5
USF3-202ENST00000478658 TRIM49P0CI25 452 aa5.69□□□□□ -1.5
USF3-202ENST00000478658 TRIM49CP0CI26 452 aa5.69□□□□□ -1.5
USF3-202ENST00000478658 AKT1P31749 480 aa5.69□□□□□ -1.5
USF3-202ENST00000478658 CTCFP49711 727 aaPredicted RBP5.69□□□□□ -1.5
USF3-202ENST00000478658 NAA20P61599 178 aa5.69□□□□□ -1.5
USF3-202ENST00000478658 ATP8B2P98198 1209 aa5.69□□□□□ -1.5
USF3-202ENST00000478658 CENPCQ03188 943 aa5.69□□□□□ -1.5
USF3-202ENST00000478658 BMT2Q1RMZ1 405 aa5.69□□□□□ -1.5
USF3-202ENST00000478658 TIMM50Q3ZCQ8 353 aa5.69□□□□□ -1.5
USF3-202ENST00000478658 TRIQKQ629K1 86 aa5.69□□□□□ -1.5
USF3-202ENST00000478658 TCEAL6Q6IPX3 200 aa5.69□□□□□ -1.5
USF3-202ENST00000478658 POMGNT2Q8NAT1 580 aa5.69□□□□□ -1.5
USF3-202ENST00000478658 FANCBQ8NB91 859 aa5.69□□□□□ -1.5
USF3-202ENST00000478658 AIF1LQ9BQI0 150 aa5.69□□□□□ -1.5
USF3-202ENST00000478658 TRMT1Q9NXH9 659 aaKnown RBP5.69□□□□□ -1.5
USF3-202ENST00000478658 UPB1Q9UBR1 384 aa5.69□□□□□ -1.5
USF3-202ENST00000478658 MOSPD1Q9UJG1 213 aa5.69□□□□□ -1.5
USF3-202ENST00000478658 MRTO4Q9UKD2 239 aaKnown RBP5.69□□□□□ -1.5
USF3-202ENST00000478658 ASAP1Q9ULH1 1129 aa5.69□□□□□ -1.5
USF3-202ENST00000478658 ACSL4O60488 711 aa5.68□□□□□ -1.5
USF3-202ENST00000478658 RAD17O75943 681 aa5.68□□□□□ -1.5
USF3-202ENST00000478658 RB1P06400 928 aa5.68□□□□□ -1.5
USF3-202ENST00000478658 VAMP7P51809 220 aa5.68□□□□□ -1.5
USF3-202ENST00000478658 ARHGEF7Q14155 803 aa5.68□□□□□ -1.5
USF3-202ENST00000478658 FAM47AQ5JRC9 791 aa5.68□□□□□ -1.5
USF3-202ENST00000478658 MZT2AQ6P582 158 aa5.68□□□□□ -1.5
USF3-202ENST00000478658 USP51Q70EK9 711 aa5.68□□□□□ -1.5
USF3-202ENST00000478658 PTF1AQ7RTS3 328 aa5.68□□□□□ -1.5
USF3-202ENST00000478658 DPP9Q86TI2 863 aa5.68□□□□□ -1.5
USF3-202ENST00000478658 ZC3HC1Q86WB0 502 aaKnown RBP5.68□□□□□ -1.5
USF3-202ENST00000478658 SPATA5Q8NB90 893 aa5.68□□□□□ -1.5
USF3-202ENST00000478658 B3GALNT2Q8NCR0 500 aa5.68□□□□□ -1.5
USF3-202ENST00000478658 BLOC1S5Q8TDH9 187 aa5.68□□□□□ -1.5
USF3-202ENST00000478658 GPRASP2Q96D09 838 aa5.68□□□□□ -1.5
USF3-202ENST00000478658 RBM41Q96IZ5 413 aaKnown RBP5.68□□□□□ -1.5
USF3-202ENST00000478658 COPS7BQ9H9Q2 264 aaPredicted RBP5.68□□□□□ -1.5
USF3-202ENST00000478658 TMEM5Q9Y2B1 443 aa5.68□□□□□ -1.5
USF3-202ENST00000478658 ARHGAP31Q2M1Z3 1444 aa5.68□□□□□ -1.5
USF3-202ENST00000478658 ATP10DQ9P241 1426 aa5.68□□□□□ -1.5
USF3-202ENST00000478658 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.68□□□□□ -1.5
USF3-202ENST00000478658 FGAP02671 866 aa5.68□□□□□ -1.5
USF3-202ENST00000478658 SERPINF2P08697 491 aa5.68□□□□□ -1.5
USF3-202ENST00000478658 CLTBP09497 229 aa5.68□□□□□ -1.5
USF3-202ENST00000478658 CPA1P15085 419 aa5.68□□□□□ -1.5
USF3-202ENST00000478658 FOSL1P15407 271 aa5.68□□□□□ -1.5
USF3-202ENST00000478658 GJB2P29033 226 aa5.68□□□□□ -1.5
USF3-202ENST00000478658 EIF4A1P60842 406 aaKnown RBP5.68□□□□□ -1.5
USF3-202ENST00000478658 C8orf34Q49A92 452 aa5.68□□□□□ -1.5
USF3-202ENST00000478658 RABGAP1LQ5R372 815 aa5.68□□□□□ -1.5
USF3-202ENST00000478658 RPTNQ6XPR3 784 aa5.68□□□□□ -1.5
USF3-202ENST00000478658 RFX6Q8HWS3 928 aa5.68□□□□□ -1.5
USF3-202ENST00000478658 FAM172AQ8WUF8 416 aa5.68□□□□□ -1.5
USF3-202ENST00000478658 REPS1Q96D71 796 aa5.68□□□□□ -1.5
USF3-202ENST00000478658 ACE2Q9BYF1 805 aaPredicted RBP5.68□□□□□ -1.5
USF3-202ENST00000478658 PLEKHA4Q9H4M7 779 aa5.68□□□□□ -1.5
USF3-202ENST00000478658 RAB9BQ9NP90 201 aa5.68□□□□□ -1.5
USF3-202ENST00000478658 MRPL39Q9NYK5 338 aaKnown RBP5.68□□□□□ -1.5
USF3-202ENST00000478658 UBP1Q9NZI7 540 aa5.68□□□□□ -1.5
USF3-202ENST00000478658 STOX2Q9P2F5 926 aaPredicted RBP5.68□□□□□ -1.5
USF3-202ENST00000478658 ARPP21Q9UBL0 812 aaPredicted RBP5.68□□□□□ -1.5
USF3-202ENST00000478658 EFR3BQ9Y2G0 817 aa5.68□□□□□ -1.5
USF3-202ENST00000478658 RALGAPBQ86X10 1494 aa5.68□□□□□ -1.5
USF3-202ENST00000478658 NFICP08651 508 aa5.68□□□□□ -1.5
USF3-202ENST00000478658 SNRPA1P09661 255 aaKnown RBP5.68□□□□□ -1.5
USF3-202ENST00000478658 AFMP43652 599 aa5.68□□□□□ -1.5
USF3-202ENST00000478658 PEX5P50542 639 aa5.68□□□□□ -1.5
USF3-202ENST00000478658 TBL3Q12788 808 aaKnown RBP5.68□□□□□ -1.5
USF3-202ENST00000478658 TRIM25Q14258 630 aaKnown RBP5.68□□□□□ -1.5
USF3-202ENST00000478658 DDB1Q16531 1140 aa5.68□□□□□ -1.5
USF3-202ENST00000478658 MTHFD1LQ6UB35 978 aa5.68□□□□□ -1.5
USF3-202ENST00000478658 CDH24Q86UP0 819 aa5.68□□□□□ -1.5
USF3-202ENST00000478658 SRFBP1Q8NEF9 429 aaKnown RBP5.68□□□□□ -1.5
USF3-202ENST00000478658 CCDC126Q96EE4 140 aa5.68□□□□□ -1.5
USF3-202ENST00000478658 ELMO2Q96JJ3 720 aa5.68□□□□□ -1.5
USF3-202ENST00000478658 TRERF1Q96PN7 1200 aa5.68□□□□□ -1.5
USF3-202ENST00000478658 TBCDQ9BTW9 1192 aa5.68□□□□□ -1.5
USF3-202ENST00000478658 RMND5AQ9H871 391 aa5.68□□□□□ -1.5
USF3-202ENST00000478658 MCUBQ9NWR8 336 aa5.68□□□□□ -1.5
USF3-202ENST00000478658 EIF3HO15372 352 aaKnown RBP eCLIP5.68□□□□□ -1.5
USF3-202ENST00000478658 NUAK1O60285 661 aa5.68□□□□□ -1.5
USF3-202ENST00000478658 ZC3H11AO75152 810 aaKnown RBP eCLIP5.68□□□□□ -1.5
USF3-202ENST00000478658 CYB5AP00167 134 aa5.68□□□□□ -1.5
USF3-202ENST00000478658 GSTM5P46439 218 aa5.68□□□□□ -1.5
USF3-202ENST00000478658 AP3M2P53677 418 aa5.68□□□□□ -1.5
USF3-202ENST00000478658 ARID5BQ14865 1188 aa5.68□□□□□ -1.5
USF3-202ENST00000478658 INAVAQ3KP66 663 aa5.68□□□□□ -1.5
USF3-202ENST00000478658 KCTD21Q4G0X4 260 aa5.68□□□□□ -1.5
USF3-202ENST00000478658 PHC3Q8NDX5 983 aa5.68□□□□□ -1.5
USF3-202ENST00000478658 COQ7Q99807 217 aa5.68□□□□□ -1.5
USF3-202ENST00000478658 EGFL8Q99944 293 aa5.68□□□□□ -1.5
USF3-202ENST00000478658 SYNDIG1Q9H7V2 258 aa5.68□□□□□ -1.5
USF3-202ENST00000478658 NOP53Q9NZM5 478 aaKnown RBP5.68□□□□□ -1.5
USF3-202ENST00000478658 SAR1BQ9Y6B6 198 aa5.68□□□□□ -1.5
USF3-202ENST00000478658 INSRP06213 1382 aa5.68□□□□□ -1.5
USF3-202ENST00000478658 TPTEP56180 551 aa5.68□□□□□ -1.5
USF3-202ENST00000478658 SGSM1Q2NKQ1 1148 aa5.68□□□□□ -1.5
USF3-202ENST00000478658 ZNF618Q5T7W0 954 aa5.68□□□□□ -1.5
USF3-202ENST00000478658 KCNV1Q6PIU1 500 aa5.68□□□□□ -1.5
USF3-202ENST00000478658 C19orf35Q6ZS72 473 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms