RNA–Protein interactions for RNA: ENST00000477234.1

SBF1-208, Transcript of SET binding factor 1, human

TSL 5

Gene SBF1, Length 947 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SBF1-208	ENST00000477234	CYP3A7	P24462	503 aa		13.55	□□□□□ -0.24
SBF1-208	ENST00000477234	CCNE1	P24864	410 aa		13.55	□□□□□ -0.24
SBF1-208	ENST00000477234	KPNA1	P52294	538 aa	Predicted RBP	13.55	□□□□□ -0.24
SBF1-208	ENST00000477234	SSRP1	Q08945	709 aa	Known RBP	13.55	□□□□□ -0.24
SBF1-208	ENST00000477234	GRM2	Q14416	872 aa		13.55	□□□□□ -0.24
SBF1-208	ENST00000477234	EMC2	Q15006	297 aa		13.55	□□□□□ -0.24
SBF1-208	ENST00000477234	HEATR6	Q6AI08	1181 aa	Known RBP	13.55	□□□□□ -0.24
SBF1-208	ENST00000477234	B3GNT9	Q6UX72	402 aa		13.55	□□□□□ -0.24
SBF1-208	ENST00000477234	RALGPS2	Q86X27	583 aa	Predicted RBP	13.55	□□□□□ -0.24
SBF1-208	ENST00000477234	MFSD6L	Q8IWD5	586 aa		13.55	□□□□□ -0.24
SBF1-208	ENST00000477234	C4orf19	Q8IY42	314 aa		13.55	□□□□□ -0.24
SBF1-208	ENST00000477234	GSTCD	Q8NEC7	633 aa		13.55	□□□□□ -0.24
SBF1-208	ENST00000477234	PRIMPOL	Q96LW4	560 aa		13.55	□□□□□ -0.24
SBF1-208	ENST00000477234	SH2D3A	Q9BRG2	576 aa		13.55	□□□□□ -0.24
SBF1-208	ENST00000477234	TRPV4	Q9HBA0	871 aa		13.55	□□□□□ -0.24
SBF1-208	ENST00000477234	NCOA5	Q9HCD5	579 aa	Known RBP	13.55	□□□□□ -0.24
SBF1-208	ENST00000477234	SH3GLB2	Q9NR46	395 aa		13.55	□□□□□ -0.24
SBF1-208	ENST00000477234	MTRR	Q9UBK8	725 aa		13.55	□□□□□ -0.24
SBF1-208	ENST00000477234	STK36	Q9NRP7	1315 aa		13.55	□□□□□ -0.24
SBF1-208	ENST00000477234	TICRR	Q7Z2Z1	1910 aa		13.54	□□□□□ -0.24
SBF1-208	ENST00000477234	COL4A3	Q01955	1670 aa		13.54	□□□□□ -0.24
SBF1-208	ENST00000477234		A0A1B0GUA9	196 aa		13.54	□□□□□ -0.24
SBF1-208	ENST00000477234	TMEM150B	A6NC51	233 aa		13.54	□□□□□ -0.24
SBF1-208	ENST00000477234	SRRM3	A6NNA2	597 aa	Predicted RBP	13.54	□□□□□ -0.24
SBF1-208	ENST00000477234	TMEM189-UBE2V1	I3L0A0	370 aa		13.54	□□□□□ -0.24
SBF1-208	ENST00000477234	CHAD	O15335	359 aa		13.54	□□□□□ -0.24
SBF1-208	ENST00000477234	PRPF3	O43395	683 aa	Known RBP	13.54	□□□□□ -0.24
SBF1-208	ENST00000477234	FGFR3	P22607	806 aa		13.54	□□□□□ -0.24
SBF1-208	ENST00000477234	ZNF252P-AS1	Q0IIN9	211 aa		13.54	□□□□□ -0.24
SBF1-208	ENST00000477234	SF3A2	Q15428	464 aa	Known RBP	13.54	□□□□□ -0.24
SBF1-208	ENST00000477234	ELF2	Q15723	593 aa		13.54	□□□□□ -0.24
SBF1-208	ENST00000477234	FAM78A	Q5JUQ0	283 aa		13.54	□□□□□ -0.24
SBF1-208	ENST00000477234	PLA2G2C	Q5R387	149 aa		13.54	□□□□□ -0.24
SBF1-208	ENST00000477234	FAM177A1	Q8N128	213 aa	Predicted RBP	13.54	□□□□□ -0.24
SBF1-208	ENST00000477234	SPRYD3	Q8NCJ5	442 aa		13.54	□□□□□ -0.24
SBF1-208	ENST00000477234	NSUN7	Q8NE18	718 aa	Known RBP	13.54	□□□□□ -0.24
SBF1-208	ENST00000477234	ZC3H10	Q96K80	434 aa	Known RBP	13.54	□□□□□ -0.24
SBF1-208	ENST00000477234	ZNF512	Q96ME7	567 aa	Predicted RBP	13.54	□□□□□ -0.24
SBF1-208	ENST00000477234	FAM20A	Q96MK3	541 aa		13.54	□□□□□ -0.24
SBF1-208	ENST00000477234	UROC1	Q96N76	676 aa		13.54	□□□□□ -0.24
SBF1-208	ENST00000477234	RNF26	Q9BY78	433 aa	Predicted RBP	13.54	□□□□□ -0.24
SBF1-208	ENST00000477234	NXF3	Q9H4D5	531 aa	Known RBP	13.54	□□□□□ -0.24
SBF1-208	ENST00000477234	CDY1	Q9Y6F8	540 aa		13.54	□□□□□ -0.24
SBF1-208	ENST00000477234	FRY	Q5TBA9	3013 aa		13.53	□□□□□ -0.24
SBF1-208	ENST00000477234	RHOBTB1	O94844	696 aa		13.53	□□□□□ -0.24
SBF1-208	ENST00000477234	KIF4A	O95239	1232 aa		13.53	□□□□□ -0.24
SBF1-208	ENST00000477234	HOXB3	P14651	431 aa	Predicted RBP	13.53	□□□□□ -0.24
SBF1-208	ENST00000477234	CEBPB	P17676	345 aa		13.53	□□□□□ -0.24
SBF1-208	ENST00000477234	XBP1	P17861	261 aa		13.53	□□□□□ -0.24
SBF1-208	ENST00000477234	ARF4	P18085	180 aa	Predicted RBP	13.53	□□□□□ -0.24
SBF1-208	ENST00000477234	CSRP1	P21291	193 aa	Known RBP	13.53	□□□□□ -0.24
SBF1-208	ENST00000477234	FCAR	P24071	287 aa		13.53	□□□□□ -0.24
SBF1-208	ENST00000477234	AKAP5	P24588	427 aa		13.53	□□□□□ -0.24
SBF1-208	ENST00000477234	GJB2	P29033	226 aa		13.53	□□□□□ -0.24
SBF1-208	ENST00000477234	CDC27	P30260	824 aa		13.53	□□□□□ -0.24
SBF1-208	ENST00000477234	YWHAB	P31946	246 aa	Known RBP	13.53	□□□□□ -0.24
SBF1-208	ENST00000477234	ADD1	P35611	737 aa	Known RBP	13.53	□□□□□ -0.24
SBF1-208	ENST00000477234	MPL	P40238	635 aa		13.53	□□□□□ -0.24
SBF1-208	ENST00000477234	NPEPPS	P55786	919 aa		13.53	□□□□□ -0.24
SBF1-208	ENST00000477234	NUCB2	P80303	420 aa		13.53	□□□□□ -0.24
SBF1-208	ENST00000477234	FOXC1	Q12948	553 aa		13.53	□□□□□ -0.24
SBF1-208	ENST00000477234	PPP2R5C	Q13362	524 aa		13.53	□□□□□ -0.24
SBF1-208	ENST00000477234	KARS	Q15046	597 aa	Known RBP	13.53	□□□□□ -0.24
SBF1-208	ENST00000477234	SLC5A9	Q2M3M2	681 aa		13.53	□□□□□ -0.24
SBF1-208	ENST00000477234	TPGS2	Q68CL5	300 aa		13.53	□□□□□ -0.24
SBF1-208	ENST00000477234	PLA2G4F	Q68DD2	849 aa		13.53	□□□□□ -0.24
SBF1-208	ENST00000477234	VIT	Q6UXI7	678 aa		13.53	□□□□□ -0.24
SBF1-208	ENST00000477234	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	13.53	□□□□□ -0.24
SBF1-208	ENST00000477234	C11orf74	Q86VG3	221 aa		13.53	□□□□□ -0.24
SBF1-208	ENST00000477234	TCEAL8	Q8IYN2	117 aa		13.53	□□□□□ -0.24
SBF1-208	ENST00000477234	CAMKK1	Q8N5S9	505 aa		13.53	□□□□□ -0.24
SBF1-208	ENST00000477234	ZCCHC14	Q8WYQ9	949 aa	Known RBP	13.53	□□□□□ -0.24
SBF1-208	ENST00000477234	EXOC4	Q96A65	974 aa		13.53	□□□□□ -0.24
SBF1-208	ENST00000477234	CPB2	Q96IY4	423 aa		13.53	□□□□□ -0.24
SBF1-208	ENST00000477234	CORO1B	Q9BR76	489 aa		13.53	□□□□□ -0.24
SBF1-208	ENST00000477234	ADPGK	Q9BRR6	497 aa		13.53	□□□□□ -0.24
SBF1-208	ENST00000477234	ANKFY1	Q9P2R3	1169 aa		13.53	□□□□□ -0.24
SBF1-208	ENST00000477234	PDCD11	Q14690	1871 aa	Known RBP	13.53	□□□□□ -0.24
SBF1-208	ENST00000477234	WDR27	A2RRH5	827 aa		13.52	□□□□□ -0.25
SBF1-208	ENST00000477234	CASTOR2	A6NHX0	329 aa		13.52	□□□□□ -0.25
SBF1-208	ENST00000477234		H7C4K7	107 aa		13.52	□□□□□ -0.25
SBF1-208	ENST00000477234	DGAT1	O75907	488 aa		13.52	□□□□□ -0.25
SBF1-208	ENST00000477234	DEXI	O95424	95 aa		13.52	□□□□□ -0.25
SBF1-208	ENST00000477234	NPTXR	O95502	500 aa		13.52	□□□□□ -0.25
SBF1-208	ENST00000477234	ATF2	P15336	505 aa		13.52	□□□□□ -0.25
SBF1-208	ENST00000477234	PLCB2	Q00722	1185 aa		13.52	□□□□□ -0.25
SBF1-208	ENST00000477234	AMPD2	Q01433	879 aa		13.52	□□□□□ -0.25
SBF1-208	ENST00000477234	RING1	Q06587	406 aa		13.52	□□□□□ -0.25
SBF1-208	ENST00000477234	ST3GAL1	Q11201	340 aa		13.52	□□□□□ -0.25
SBF1-208	ENST00000477234	SRSF5	Q13243	272 aa	Known RBP	13.52	□□□□□ -0.25
SBF1-208	ENST00000477234	NTRK3	Q16288	839 aa		13.52	□□□□□ -0.25
SBF1-208	ENST00000477234	XKR9	Q5GH70	373 aa		13.52	□□□□□ -0.25
SBF1-208	ENST00000477234	PRSS36	Q5K4E3	855 aa		13.52	□□□□□ -0.25
SBF1-208	ENST00000477234	SLC8B1	Q6J4K2	584 aa		13.52	□□□□□ -0.25
SBF1-208	ENST00000477234	TBCK	Q8TEA7	893 aa		13.52	□□□□□ -0.25
SBF1-208	ENST00000477234	HASPIN	Q8TF76	798 aa		13.52	□□□□□ -0.25
SBF1-208	ENST00000477234	CCDC43	Q96MW1	224 aa	Known RBP	13.52	□□□□□ -0.25
SBF1-208	ENST00000477234	NAP1L4	Q99733	375 aa	Known RBP	13.52	□□□□□ -0.25
SBF1-208	ENST00000477234	EDEM2	Q9BV94	578 aa		13.52	□□□□□ -0.25
SBF1-208	ENST00000477234	ZSWIM4	Q9H7M6	989 aa		13.52	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms