RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 F8W8V4 182 aa7.37□□□□□ -1.23
VPS50-212ENST00000476413 PJA2O43164 708 aa7.37□□□□□ -1.23
VPS50-212ENST00000476413 ATP5JP18859 108 aa7.37□□□□□ -1.23
VPS50-212ENST00000476413 SOX8P57073 446 aa7.37□□□□□ -1.23
VPS50-212ENST00000476413 EXOSC9Q06265 439 aaKnown RBP7.37□□□□□ -1.23
VPS50-212ENST00000476413 CCDC93Q567U6 631 aa7.37□□□□□ -1.23
VPS50-212ENST00000476413 TCF25Q9BQ70 676 aa7.37□□□□□ -1.23
VPS50-212ENST00000476413 LSM14BQ9BX40 385 aaKnown RBP7.37□□□□□ -1.23
VPS50-212ENST00000476413 DPH1Q9BZG8 443 aa7.37□□□□□ -1.23
VPS50-212ENST00000476413 KIAA1586Q9HCI6 787 aa7.37□□□□□ -1.23
VPS50-212ENST00000476413 PIH1D1Q9NWS0 290 aaKnown RBP7.37□□□□□ -1.23
VPS50-212ENST00000476413 TCRBV7S2A1N4TA0A589 114 aa7.36□□□□□ -1.23
VPS50-212ENST00000476413 NCK2O43639 380 aa7.36□□□□□ -1.23
VPS50-212ENST00000476413 SLC43A1O75387 559 aa7.36□□□□□ -1.23
VPS50-212ENST00000476413 TSHRP16473 764 aa7.36□□□□□ -1.23
VPS50-212ENST00000476413 RPL17P18621 184 aaKnown RBP7.36□□□□□ -1.23
VPS50-212ENST00000476413 SUMO3P55854 103 aaPredicted RBP7.36□□□□□ -1.23
VPS50-212ENST00000476413 PTH1RQ03431 593 aa7.36□□□□□ -1.23
VPS50-212ENST00000476413 KIF22Q14807 665 aa7.36□□□□□ -1.23
VPS50-212ENST00000476413 ZNF124Q15973 351 aa7.36□□□□□ -1.23
VPS50-212ENST00000476413 NT5DC1Q5TFE4 455 aa7.36□□□□□ -1.23
VPS50-212ENST00000476413 ERAP2Q6P179 960 aa7.36□□□□□ -1.23
VPS50-212ENST00000476413 TSHZ1Q6ZSZ6 1077 aa7.36□□□□□ -1.23
VPS50-212ENST00000476413 GPRIN1Q7Z2K8 1008 aa7.36□□□□□ -1.23
VPS50-212ENST00000476413 DPP9Q86TI2 863 aa7.36□□□□□ -1.23
VPS50-212ENST00000476413 FAM124AQ86V42 546 aa7.36□□□□□ -1.23
VPS50-212ENST00000476413 RNF152Q8N8N0 203 aa7.36□□□□□ -1.23
VPS50-212ENST00000476413 OR10H5Q8NGA6 315 aa7.36□□□□□ -1.23
VPS50-212ENST00000476413 DEPTORQ8TB45 409 aa7.36□□□□□ -1.23
VPS50-212ENST00000476413 KBTBD7Q8WVZ9 684 aa7.36□□□□□ -1.23
VPS50-212ENST00000476413 MAML1Q92585 1016 aa7.36□□□□□ -1.23
VPS50-212ENST00000476413 TNPO1Q92973 898 aaKnown RBP7.36□□□□□ -1.23
VPS50-212ENST00000476413 MSLNLQ96KJ4 702 aa7.36□□□□□ -1.23
VPS50-212ENST00000476413 FMNL2Q96PY5 1086 aa7.36□□□□□ -1.23
VPS50-212ENST00000476413 SEC61A2Q9H9S3 476 aa7.36□□□□□ -1.23
VPS50-212ENST00000476413 MSL2Q9HCI7 577 aa7.36□□□□□ -1.23
VPS50-212ENST00000476413 FAM30AQ9NZY2 134 aa7.36□□□□□ -1.23
VPS50-212ENST00000476413 ZDHHC8Q9ULC8 765 aa7.36□□□□□ -1.23
VPS50-212ENST00000476413 MED16Q9Y2X0 877 aa7.36□□□□□ -1.23
VPS50-212ENST00000476413 A0A1W2PRX2 142 aa7.35□□□□□ -1.23
VPS50-212ENST00000476413 B5MCH6 92 aa7.35□□□□□ -1.23
VPS50-212ENST00000476413 SETSIPP0DME0 302 aa7.35□□□□□ -1.23
VPS50-212ENST00000476413 BRAFP15056 766 aa7.35□□□□□ -1.23
VPS50-212ENST00000476413 CR2P20023 1033 aa7.35□□□□□ -1.23
VPS50-212ENST00000476413 TNFSF4P23510 183 aa7.35□□□□□ -1.23
VPS50-212ENST00000476413 KCNC1P48547 511 aa7.35□□□□□ -1.23
VPS50-212ENST00000476413 EPHB4P54760 987 aa7.35□□□□□ -1.23
VPS50-212ENST00000476413 PPP2CBP62714 309 aa7.35□□□□□ -1.23
VPS50-212ENST00000476413 PPP2CAP67775 309 aa7.35□□□□□ -1.23
VPS50-212ENST00000476413 ZNF529Q6P280 563 aa7.35□□□□□ -1.23
VPS50-212ENST00000476413 UBE3BQ7Z3V4 1068 aa7.35□□□□□ -1.23
VPS50-212ENST00000476413 XYLT1Q86Y38 959 aa7.35□□□□□ -1.23
VPS50-212ENST00000476413 VPS37AQ8NEZ2 397 aa7.35□□□□□ -1.23
VPS50-212ENST00000476413 ZNF512Q96ME7 567 aaPredicted RBP7.35□□□□□ -1.23
VPS50-212ENST00000476413 SMURF2Q9HAU4 748 aa7.35□□□□□ -1.23
VPS50-212ENST00000476413 ZNF287Q9HBT7 754 aa7.35□□□□□ -1.23
VPS50-212ENST00000476413 FBXO34Q9NWN3 711 aa7.35□□□□□ -1.23
VPS50-212ENST00000476413 COL20A1Q9P218 1284 aa7.35□□□□□ -1.23
VPS50-212ENST00000476413 KLRG2A4D1S0 409 aaPredicted RBP7.34□□□□□ -1.23
VPS50-212ENST00000476413 TBKBP1A7MCY6 615 aa7.34□□□□□ -1.23
VPS50-212ENST00000476413 CDC14BO60729 498 aa7.34□□□□□ -1.23
VPS50-212ENST00000476413 SNRPA1P09661 255 aaKnown RBP7.34□□□□□ -1.23
VPS50-212ENST00000476413 MTHFD1P11586 935 aaKnown RBP7.34□□□□□ -1.23
VPS50-212ENST00000476413 PHKA1P46020 1223 aa7.34□□□□□ -1.23
VPS50-212ENST00000476413 CLRN1P58418 232 aa7.34□□□□□ -1.23
VPS50-212ENST00000476413 CREMQ03060 361 aa7.34□□□□□ -1.23
VPS50-212ENST00000476413 DHX8Q14562 1220 aaKnown RBP7.34□□□□□ -1.23
VPS50-212ENST00000476413 BMT2Q1RMZ1 405 aa7.34□□□□□ -1.23
VPS50-212ENST00000476413 CIAPIN1Q6FI81 312 aa7.34□□□□□ -1.23
VPS50-212ENST00000476413 BORAQ6PGQ7 559 aa7.34□□□□□ -1.23
VPS50-212ENST00000476413 FAM111BQ6SJ93 734 aa7.34□□□□□ -1.23
VPS50-212ENST00000476413 DOK3Q7L591 496 aa7.34□□□□□ -1.23
VPS50-212ENST00000476413 LGI4Q8N135 537 aa7.34□□□□□ -1.23
VPS50-212ENST00000476413 SYT8Q8NBV8 401 aa7.34□□□□□ -1.23
VPS50-212ENST00000476413 PLA2G12BQ9BX93 195 aa7.34□□□□□ -1.23
VPS50-212ENST00000476413 UNKQ9C0B0 810 aaKnown RBP7.34□□□□□ -1.23
VPS50-212ENST00000476413 C12orf65Q9H3J6 166 aaKnown RBP7.34□□□□□ -1.23
VPS50-212ENST00000476413 CNNM1Q9NRU3 951 aa7.34□□□□□ -1.23
VPS50-212ENST00000476413 JKAMPQ9P055 326 aa7.34□□□□□ -1.23
VPS50-212ENST00000476413 OGDHLQ9ULD0 1010 aa7.34□□□□□ -1.23
VPS50-212ENST00000476413 SLC45A2Q9UMX9 530 aa7.34□□□□□ -1.23
VPS50-212ENST00000476413 SNX13Q9Y5W8 968 aa7.34□□□□□ -1.23
VPS50-212ENST00000476413 FOXN3O00409 490 aaPredicted RBP7.33□□□□□ -1.24
VPS50-212ENST00000476413 KIAA0391O15091 583 aaKnown RBP7.33□□□□□ -1.24
VPS50-212ENST00000476413 TRIM13O60858 407 aa7.33□□□□□ -1.24
VPS50-212ENST00000476413 ABHD16AO95870 558 aa7.33□□□□□ -1.24
VPS50-212ENST00000476413 HTRA4P83105 476 aaPredicted RBP7.33□□□□□ -1.24
VPS50-212ENST00000476413 DAG1Q14118 895 aa7.33□□□□□ -1.24
VPS50-212ENST00000476413 ATP2B3Q16720 1220 aa7.33□□□□□ -1.24
VPS50-212ENST00000476413 GRAMD1BQ3KR37 738 aa7.33□□□□□ -1.24
VPS50-212ENST00000476413 C1orf228Q6PIY5 440 aa7.33□□□□□ -1.24
VPS50-212ENST00000476413 ARHGEF18Q6ZSZ5 1173 aa7.33□□□□□ -1.24
VPS50-212ENST00000476413 ZNF365Q70YC5 407 aa7.33□□□□□ -1.24
VPS50-212ENST00000476413 PLEKHH3Q7Z736 793 aa7.33□□□□□ -1.24
VPS50-212ENST00000476413 C1QL4Q86Z23 238 aa7.33□□□□□ -1.24
VPS50-212ENST00000476413 ENAHQ8N8S7 591 aaPredicted RBP7.33□□□□□ -1.24
VPS50-212ENST00000476413 KIAA1191Q96A73 305 aa7.33□□□□□ -1.24
VPS50-212ENST00000476413 NMD3Q96D46 503 aaKnown RBP7.33□□□□□ -1.24
VPS50-212ENST00000476413 ZC3H10Q96K80 434 aaKnown RBP7.33□□□□□ -1.24
VPS50-212ENST00000476413 LRRC37BQ96QE4 947 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms