RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 SETD1AO15047 1707 aaKnown RBP14.58□□□□□ -0.08
BRAT1-203ENST00000467558 GPC4O75487 556 aa14.58□□□□□ -0.08
BRAT1-203ENST00000467558 LCP1P13796 627 aa14.58□□□□□ -0.08
BRAT1-203ENST00000467558 PCK1P35558 622 aa14.58□□□□□ -0.08
BRAT1-203ENST00000467558 SEPT6Q14141 434 aa14.58□□□□□ -0.08
BRAT1-203ENST00000467558 SPARCL1Q14515 664 aa14.58□□□□□ -0.08
BRAT1-203ENST00000467558 EPC2Q52LR7 807 aa14.58□□□□□ -0.08
BRAT1-203ENST00000467558 MUM1L1Q5H9M0 696 aa14.58□□□□□ -0.08
BRAT1-203ENST00000467558 MPZL3Q6UWV2 235 aa14.58□□□□□ -0.08
BRAT1-203ENST00000467558 P2RX7Q99572 595 aaKnown RBP14.58□□□□□ -0.08
BRAT1-203ENST00000467558 OSBPL8Q9BZF1 889 aa14.58□□□□□ -0.08
BRAT1-203ENST00000467558 ZCCHC17Q9NP64 241 aaKnown RBP14.58□□□□□ -0.08
BRAT1-203ENST00000467558 A1CFQ9NQ94 594 aaKnown RBP14.58□□□□□ -0.08
BRAT1-203ENST00000467558 ROBO3Q96MS0 1386 aa14.57□□□□□ -0.08
BRAT1-203ENST00000467558 TOPAZ1Q8N9V7 1692 aa14.57□□□□□ -0.08
BRAT1-203ENST00000467558 SH3BP5O60239 455 aa14.57□□□□□ -0.08
BRAT1-203ENST00000467558 PRLRP16471 622 aa14.57□□□□□ -0.08
BRAT1-203ENST00000467558 SLC12A3P55017 1021 aa14.57□□□□□ -0.08
BRAT1-203ENST00000467558 NME3Q13232 169 aa14.57□□□□□ -0.08
BRAT1-203ENST00000467558 PLCB4Q15147 1175 aa14.57□□□□□ -0.08
BRAT1-203ENST00000467558 MED15Q96RN5 788 aa14.57□□□□□ -0.08
BRAT1-203ENST00000467558 NUDCD1Q96RS6 583 aa14.57□□□□□ -0.08
BRAT1-203ENST00000467558 THAP2Q9H0W7 228 aa14.57□□□□□ -0.08
BRAT1-203ENST00000467558 ZNF189O75820 626 aaPredicted RBP14.57□□□□□ -0.08
BRAT1-203ENST00000467558 MMEP08473 750 aa14.57□□□□□ -0.08
BRAT1-203ENST00000467558 RGS2P41220 211 aa14.57□□□□□ -0.08
BRAT1-203ENST00000467558 RGS7P49802 495 aa14.57□□□□□ -0.08
BRAT1-203ENST00000467558 DMTNQ08495 405 aa14.57□□□□□ -0.08
BRAT1-203ENST00000467558 DCAF4L1Q3SXM0 396 aa14.57□□□□□ -0.08
BRAT1-203ENST00000467558 CD302Q8IX05 232 aa14.57□□□□□ -0.08
BRAT1-203ENST00000467558 SRRM1Q8IYB3 904 aaKnown RBP14.57□□□□□ -0.08
BRAT1-203ENST00000467558 ATP11CQ8NB49 1132 aa14.57□□□□□ -0.08
BRAT1-203ENST00000467558 GDAP1Q8TB36 358 aa14.57□□□□□ -0.08
BRAT1-203ENST00000467558 ATP8B4Q8TF62 1192 aa14.57□□□□□ -0.08
BRAT1-203ENST00000467558 ATP6V1G3Q96LB4 118 aa14.57□□□□□ -0.08
BRAT1-203ENST00000467558 TTC1Q99614 292 aa14.57□□□□□ -0.08
BRAT1-203ENST00000467558 ARHGAP42A6NI28 874 aa14.57□□□□□ -0.08
BRAT1-203ENST00000467558 F8VZ95 297 aa14.57□□□□□ -0.08
BRAT1-203ENST00000467558 STRNO43815 780 aa14.57□□□□□ -0.08
BRAT1-203ENST00000467558 EIF3EP60228 445 aaKnown RBP14.57□□□□□ -0.08
BRAT1-203ENST00000467558 PDIA2Q13087 525 aaKnown RBP14.57□□□□□ -0.08
BRAT1-203ENST00000467558 SV2AQ7L0J3 742 aa14.57□□□□□ -0.08
BRAT1-203ENST00000467558 FEZF2Q8TBJ5 459 aa14.57□□□□□ -0.08
BRAT1-203ENST00000467558 ANKRD7Q92527 254 aa14.57□□□□□ -0.08
BRAT1-203ENST00000467558 TRAIPQ9BWF2 469 aa14.57□□□□□ -0.08
BRAT1-203ENST00000467558 GPRC5DQ9NZD1 345 aa14.57□□□□□ -0.08
BRAT1-203ENST00000467558 DUSP10Q9Y6W6 482 aa14.57□□□□□ -0.08
BRAT1-203ENST00000467558 ITGA4P13612 1032 aa14.57□□□□□ -0.08
BRAT1-203ENST00000467558 CYP24A1Q07973 514 aa14.57□□□□□ -0.08
BRAT1-203ENST00000467558 TBX2Q13207 712 aaPredicted RBP14.57□□□□□ -0.08
BRAT1-203ENST00000467558 SV2CQ496J9 727 aa14.57□□□□□ -0.08
BRAT1-203ENST00000467558 C4orf50Q6ZRC1 276 aa14.57□□□□□ -0.08
BRAT1-203ENST00000467558 ZC3H18Q86VM9 953 aaKnown RBP14.57□□□□□ -0.08
BRAT1-203ENST00000467558 VSIG10LQ86VR7 867 aa14.57□□□□□ -0.08
BRAT1-203ENST00000467558 TAS1R2Q8TE23 839 aa14.57□□□□□ -0.08
BRAT1-203ENST00000467558 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.57□□□□□ -0.087e-6■■■■■ 27.5
BRAT1-203ENST00000467558 VPS39Q96JC1 886 aa14.57□□□□□ -0.08
BRAT1-203ENST00000467558 GOLPH3Q9H4A6 298 aa14.57□□□□□ -0.08
BRAT1-203ENST00000467558 APOL1O14791 398 aa14.56□□□□□ -0.08
BRAT1-203ENST00000467558 ATMINO43313 823 aaPredicted RBP14.56□□□□□ -0.08
BRAT1-203ENST00000467558 ITGB3P05106 788 aa14.56□□□□□ -0.08
BRAT1-203ENST00000467558 PDGFRBP09619 1106 aa14.56□□□□□ -0.08
BRAT1-203ENST00000467558 ITIH2P19823 946 aa14.56□□□□□ -0.08
BRAT1-203ENST00000467558 XPAP23025 273 aaPredicted RBP14.56□□□□□ -0.08
BRAT1-203ENST00000467558 PPP2R2AP63151 447 aa14.56□□□□□ -0.08
BRAT1-203ENST00000467558 SEZ6Q53EL9 994 aa14.56□□□□□ -0.08
BRAT1-203ENST00000467558 MAP3K21Q5TCX8 1036 aa14.56□□□□□ -0.08
BRAT1-203ENST00000467558 BTBD8Q5XKL5 378 aa14.56□□□□□ -0.08
BRAT1-203ENST00000467558 ZBED8Q8IZ13 594 aa14.56□□□□□ -0.08
BRAT1-203ENST00000467558 RYBPQ8N488 228 aaPredicted RBP14.56□□□□□ -0.08
BRAT1-203ENST00000467558 DHX38Q92620 1227 aaKnown RBP14.56□□□□□ -0.08
BRAT1-203ENST00000467558 SLC35C1Q96A29 364 aa14.56□□□□□ -0.08
BRAT1-203ENST00000467558 GCNAQ96QF7 691 aa14.56□□□□□ -0.08
BRAT1-203ENST00000467558 CGRRF1Q99675 332 aa14.56□□□□□ -0.08
BRAT1-203ENST00000467558 BFARQ9NZS9 450 aa14.56□□□□□ -0.08
BRAT1-203ENST00000467558 SLURP2P0DP57 97 aa14.56□□□□□ -0.08
BRAT1-203ENST00000467558 PNPLA4P41247 253 aa14.56□□□□□ -0.08
BRAT1-203ENST00000467558 ALDH5A1P51649 535 aaPredicted RBP14.56□□□□□ -0.08
BRAT1-203ENST00000467558 WDR18Q9BV38 432 aa14.56□□□□□ -0.08
BRAT1-203ENST00000467558 ASCC2Q9H1I8 757 aaPredicted RBP14.56□□□□□ -0.08
BRAT1-203ENST00000467558 AIPL1Q9NZN9 384 aa14.56□□□□□ -0.08
BRAT1-203ENST00000467558 UBQLN1Q9UMX0 589 aaKnown RBP14.56□□□□□ -0.08
BRAT1-203ENST00000467558 CAPN6Q9Y6Q1 641 aa14.56□□□□□ -0.08
BRAT1-203ENST00000467558 ZBTB24O43167 697 aaPredicted RBP14.56□□□□□ -0.08
BRAT1-203ENST00000467558 PSMD10O75832 226 aa14.56□□□□□ -0.08
BRAT1-203ENST00000467558 SNHG28P0DPA3 235 aa14.56□□□□□ -0.08
BRAT1-203ENST00000467558 KRT10P13645 584 aa14.56□□□□□ -0.08
BRAT1-203ENST00000467558 CYP11B1P15538 503 aa14.56□□□□□ -0.08
BRAT1-203ENST00000467558 BMP6P22004 513 aa14.56□□□□□ -0.08
BRAT1-203ENST00000467558 EPHB1P54762 984 aa14.56□□□□□ -0.08
BRAT1-203ENST00000467558 RAB44Q7Z6P3 723 aaPredicted RBP14.56□□□□□ -0.08
BRAT1-203ENST00000467558 GPATCH11Q8N954 259 aa14.56□□□□□ -0.08
BRAT1-203ENST00000467558 SMARCAL1Q9NZC9 954 aa14.56□□□□□ -0.08
BRAT1-203ENST00000467558 COPEO14579 308 aa14.55□□□□□ -0.08
BRAT1-203ENST00000467558 NPTXRO95502 500 aa14.55□□□□□ -0.08
BRAT1-203ENST00000467558 C1orf228Q6PIY5 440 aa14.55□□□□□ -0.08
BRAT1-203ENST00000467558 LMNTD2Q8IXW0 634 aa14.55□□□□□ -0.08
BRAT1-203ENST00000467558 TNFRSF25Q93038 417 aa14.55□□□□□ -0.08
BRAT1-203ENST00000467558 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.55□□□□□ -0.08
BRAT1-203ENST00000467558 ADM5C9JUS6 153 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms