RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 STK38Q15208 465 aa20.63■□□□□ 0.89
COL5A1-203ENST00000460264 KYAT1Q16773 422 aa20.63■□□□□ 0.89
COL5A1-203ENST00000460264 ZC2HC1CQ53FD0 456 aaPredicted RBP20.63■□□□□ 0.89
COL5A1-203ENST00000460264 ZBTB41Q5SVQ8 909 aa20.63■□□□□ 0.89
COL5A1-203ENST00000460264 CCDC73Q6ZRK6 1079 aa20.63■□□□□ 0.89
COL5A1-203ENST00000460264 ANKS3Q6ZW76 656 aa20.63■□□□□ 0.89
COL5A1-203ENST00000460264 BMP8AQ7Z5Y6 402 aa20.63■□□□□ 0.89
COL5A1-203ENST00000460264 SFR1Q86XK3 245 aa20.63■□□□□ 0.89
COL5A1-203ENST00000460264 LINC00301Q8NCQ3 95 aa20.63■□□□□ 0.89
COL5A1-203ENST00000460264 DDX12PQ92771 950 aa20.63■□□□□ 0.89
COL5A1-203ENST00000460264 ASIC4Q96FT7 647 aa20.63■□□□□ 0.89
COL5A1-203ENST00000460264 PRKD2Q9BZL6 878 aa20.63■□□□□ 0.89
COL5A1-203ENST00000460264 ST6GALNAC4Q9H4F1 302 aa20.63■□□□□ 0.89
COL5A1-203ENST00000460264 LIMD1Q9UGP4 676 aa20.63■□□□□ 0.89
COL5A1-203ENST00000460264 ZDBF2Q9HCK1 2354 aa20.63■□□□□ 0.89
COL5A1-203ENST00000460264 N4BP1O75113 896 aaKnown RBP20.62■□□□□ 0.89
COL5A1-203ENST00000460264 HSP90AA1P07900 732 aaKnown RBP20.62■□□□□ 0.89
COL5A1-203ENST00000460264 OR1D2P34982 312 aa20.62■□□□□ 0.89
COL5A1-203ENST00000460264 STAT6P42226 847 aa20.62■□□□□ 0.89
COL5A1-203ENST00000460264 PPP2R3AQ06190 1150 aa20.62■□□□□ 0.89
COL5A1-203ENST00000460264 RAB33AQ14088 237 aa20.62■□□□□ 0.89
COL5A1-203ENST00000460264 ENOX2Q16206 610 aaKnown RBP20.62■□□□□ 0.89
COL5A1-203ENST00000460264 LIN9Q5TKA1 542 aa20.62■□□□□ 0.89
COL5A1-203ENST00000460264 RSPO2Q6UXX9 243 aaPredicted RBP20.62■□□□□ 0.89
COL5A1-203ENST00000460264 SV2BQ7L1I2 683 aa20.62■□□□□ 0.89
COL5A1-203ENST00000460264 DNAJC19Q96DA6 116 aa20.62■□□□□ 0.89
COL5A1-203ENST00000460264 ZNF396Q96N95 335 aaPredicted RBP20.62■□□□□ 0.89
COL5A1-203ENST00000460264 MSTO1Q9BUK6 570 aa20.62■□□□□ 0.89
COL5A1-203ENST00000460264 PIDD1Q9HB75 910 aa20.62■□□□□ 0.89
COL5A1-203ENST00000460264 NUB1Q9Y5A7 615 aa20.62■□□□□ 0.89
COL5A1-203ENST00000460264 BACE2Q9Y5Z0 518 aa20.62■□□□□ 0.89
COL5A1-203ENST00000460264 CDY1Q9Y6F8 540 aa20.62■□□□□ 0.89
COL5A1-203ENST00000460264 SPAG1Q07617 926 aa20.61■□□□□ 0.89
COL5A1-203ENST00000460264 UBALD2Q8IYN6 164 aa20.61■□□□□ 0.89
COL5A1-203ENST00000460264 STAMQ92783 540 aa20.61■□□□□ 0.89
COL5A1-203ENST00000460264 PBXIP1Q96AQ6 731 aa20.61■□□□□ 0.89
COL5A1-203ENST00000460264 KIF12Q96FN5 646 aa20.61■□□□□ 0.89
COL5A1-203ENST00000460264 MFSD14AQ96MC6 490 aa20.61■□□□□ 0.89
COL5A1-203ENST00000460264 TFIP11Q9UBB9 837 aaKnown RBP20.61■□□□□ 0.89
COL5A1-203ENST00000460264 SEL1LQ9UBV2 794 aa20.61■□□□□ 0.89
COL5A1-203ENST00000460264 SYN3O14994 580 aa20.6■□□□□ 0.89
COL5A1-203ENST00000460264 SPTLC2O15270 562 aa20.6■□□□□ 0.89
COL5A1-203ENST00000460264 PPP1R37O75864 691 aa20.6■□□□□ 0.89
COL5A1-203ENST00000460264 YEATS4O95619 227 aa20.6■□□□□ 0.89
COL5A1-203ENST00000460264 C8AP07357 584 aa20.6■□□□□ 0.89
COL5A1-203ENST00000460264 HNRNPA1P09651 372 aaKnown RBP eCLIP20.6■□□□□ 0.89
COL5A1-203ENST00000460264 PLA2G5P39877 138 aa20.6■□□□□ 0.89
COL5A1-203ENST00000460264 ZBTB6Q15916 424 aa20.6■□□□□ 0.89
COL5A1-203ENST00000460264 VARS2Q5ST30 1063 aaKnown RBP20.6■□□□□ 0.89
COL5A1-203ENST00000460264 FOXD4L5Q5VV16 416 aaPredicted RBP20.6■□□□□ 0.89
COL5A1-203ENST00000460264 ZNF720Q7Z2F6 126 aa20.6■□□□□ 0.89
COL5A1-203ENST00000460264 TMEM130Q8N3G9 435 aa20.6■□□□□ 0.89
COL5A1-203ENST00000460264 FOXD4L4Q8WXT5 416 aaPredicted RBP20.6■□□□□ 0.89
COL5A1-203ENST00000460264 HVCN1Q96D96 273 aa20.6■□□□□ 0.89
COL5A1-203ENST00000460264 SUSD3Q96L08 255 aa20.6■□□□□ 0.89
COL5A1-203ENST00000460264 PANK2Q9BZ23 570 aa20.6■□□□□ 0.89
COL5A1-203ENST00000460264 SMOC2Q9H3U7 446 aa20.6■□□□□ 0.89
COL5A1-203ENST00000460264 RPF1Q9H9Y2 349 aaKnown RBP20.6■□□□□ 0.89
COL5A1-203ENST00000460264 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.6■□□□□ 0.89
COL5A1-203ENST00000460264 LACTBL1A8MY62 500 aa20.59■□□□□ 0.89
COL5A1-203ENST00000460264 TISP43B9A030 160 aa20.59■□□□□ 0.89
COL5A1-203ENST00000460264 ANKRD63C9JTQ0 380 aa20.59■□□□□ 0.89
COL5A1-203ENST00000460264 PPP6R2O75170 966 aa20.59■□□□□ 0.89
COL5A1-203ENST00000460264 ADRB2P07550 413 aa20.59■□□□□ 0.89
COL5A1-203ENST00000460264 PDIA4P13667 645 aaKnown RBP20.59■□□□□ 0.89
COL5A1-203ENST00000460264 GAP43P17677 238 aa20.59■□□□□ 0.89
COL5A1-203ENST00000460264 LRPAP1P30533 357 aa20.59■□□□□ 0.89
COL5A1-203ENST00000460264 HOXA9P31269 272 aa20.59■□□□□ 0.89
COL5A1-203ENST00000460264 MCM4P33991 863 aa20.59■□□□□ 0.89
COL5A1-203ENST00000460264 PPM1LQ5SGD2 360 aa20.59■□□□□ 0.89
COL5A1-203ENST00000460264 PDILTQ8N807 584 aa20.59■□□□□ 0.89
COL5A1-203ENST00000460264 SLC7A14Q8TBB6 771 aa20.59■□□□□ 0.89
COL5A1-203ENST00000460264 STRA6Q9BX79 667 aa20.59■□□□□ 0.89
COL5A1-203ENST00000460264 MRPL44Q9H9J2 332 aaKnown RBP20.59■□□□□ 0.89
COL5A1-203ENST00000460264 CPSF3Q9UKF6 684 aaKnown RBP20.59■□□□□ 0.89
COL5A1-203ENST00000460264 UBQLN1Q9UMX0 589 aaKnown RBP20.59■□□□□ 0.89
COL5A1-203ENST00000460264 TSC2P49815 1807 aa20.59■□□□□ 0.89
COL5A1-203ENST00000460264 NOTCH4Q99466 2003 aa20.58■□□□□ 0.89
COL5A1-203ENST00000460264 TBC1D4O60343 1298 aa20.58■□□□□ 0.89
COL5A1-203ENST00000460264 ZSCAN22P10073 491 aaPredicted RBP20.58■□□□□ 0.89
COL5A1-203ENST00000460264 GBP2P32456 591 aaPredicted RBP20.58■□□□□ 0.89
COL5A1-203ENST00000460264 AXDND1Q5T1B0 1012 aaPredicted RBP20.58■□□□□ 0.89
COL5A1-203ENST00000460264 SLC8B1Q6J4K2 584 aa20.58■□□□□ 0.89
COL5A1-203ENST00000460264 FBXL6Q8N531 539 aa20.58■□□□□ 0.89
COL5A1-203ENST00000460264 MYADMQ96S97 322 aa20.58■□□□□ 0.89
COL5A1-203ENST00000460264 TSPAN18Q96SJ8 248 aa20.58■□□□□ 0.89
COL5A1-203ENST00000460264 IKZF4Q9H2S9 585 aa20.58■□□□□ 0.89
COL5A1-203ENST00000460264 OLFML3Q9NRN5 406 aa20.58■□□□□ 0.89
COL5A1-203ENST00000460264 TBC1D7Q9P0N9 293 aa20.58■□□□□ 0.89
COL5A1-203ENST00000460264 EPS15L1Q9UBC2 864 aa20.58■□□□□ 0.89
COL5A1-203ENST00000460264 STYXL1Q9Y6J8 313 aa20.58■□□□□ 0.89
COL5A1-203ENST00000460264 FRMD3A2A2Y4 597 aa20.57■□□□□ 0.88
COL5A1-203ENST00000460264 XPOTO43592 962 aaKnown RBP20.57■□□□□ 0.88
COL5A1-203ENST00000460264 F13A1P00488 732 aa20.57■□□□□ 0.88
COL5A1-203ENST00000460264 IDEP14735 1019 aa20.57■□□□□ 0.88
COL5A1-203ENST00000460264 CYP3A5P20815 502 aa20.57■□□□□ 0.88
COL5A1-203ENST00000460264 GUCY2FP51841 1108 aa20.57■□□□□ 0.88
COL5A1-203ENST00000460264 ROR1Q01973 937 aa20.57■□□□□ 0.88
COL5A1-203ENST00000460264 MRPL58Q14197 206 aaKnown RBP20.57■□□□□ 0.88
COL5A1-203ENST00000460264 SLFN12LQ6IEE8 588 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 208.8 ms