RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 CRAMP1Q96RY5 1269 aa11.35□□□□□ -0.59
LINC00342-202ENST00000448494 NUP85Q9BW27 656 aa11.35□□□□□ -0.59
LINC00342-202ENST00000448494 SEMA4AQ9H3S1 761 aa11.35□□□□□ -0.59
LINC00342-202ENST00000448494 ARMC7Q9H6L4 198 aa11.35□□□□□ -0.59
LINC00342-202ENST00000448494 C10orf88Q9H8K7 445 aa11.35□□□□□ -0.59
LINC00342-202ENST00000448494 C17orf75Q9HAS0 396 aa11.35□□□□□ -0.59
LINC00342-202ENST00000448494 ACTL7BQ9Y614 415 aa11.35□□□□□ -0.59
LINC00342-202ENST00000448494 ARHGAP23Q9P227 1491 aa11.35□□□□□ -0.59
LINC00342-202ENST00000448494 RGS13O14921 159 aa11.34□□□□□ -0.59
LINC00342-202ENST00000448494 HAT1O14929 419 aa11.34□□□□□ -0.59
LINC00342-202ENST00000448494 B4GALT4O60513 344 aa11.34□□□□□ -0.59
LINC00342-202ENST00000448494 IGBP1P78318 339 aa11.34□□□□□ -0.59
LINC00342-202ENST00000448494 BASP1P80723 227 aaKnown RBP11.34□□□□□ -0.59
LINC00342-202ENST00000448494 KRT76Q01546 638 aa11.34□□□□□ -0.59
LINC00342-202ENST00000448494 DLG1Q12959 904 aa11.34□□□□□ -0.59
LINC00342-202ENST00000448494 SFT2D3Q587I9 215 aa11.34□□□□□ -0.59
LINC00342-202ENST00000448494 DCAF6Q58WW2 860 aa11.34□□□□□ -0.59
LINC00342-202ENST00000448494 LMBRD2Q68DH5 695 aaPredicted RBP11.34□□□□□ -0.59
LINC00342-202ENST00000448494 NXNQ6DKJ4 435 aa11.34□□□□□ -0.59
LINC00342-202ENST00000448494 MB21D2Q8IYB1 491 aaPredicted RBP11.34□□□□□ -0.59
LINC00342-202ENST00000448494 LILRB1Q8NHL6 650 aaPredicted RBP11.34□□□□□ -0.59
LINC00342-202ENST00000448494 SYMPKQ92797 1274 aaKnown RBP11.34□□□□□ -0.59
LINC00342-202ENST00000448494 EDC3Q96F86 508 aaKnown RBP11.34□□□□□ -0.59
LINC00342-202ENST00000448494 PLEKHA8Q96JA3 519 aa11.34□□□□□ -0.59
LINC00342-202ENST00000448494 PHF20Q9BVI0 1012 aa11.34□□□□□ -0.59
LINC00342-202ENST00000448494 KLC2Q9H0B6 622 aa11.34□□□□□ -0.59
LINC00342-202ENST00000448494 Q9H521 79 aa11.34□□□□□ -0.59
LINC00342-202ENST00000448494 NCKIPSDQ9NZQ3 722 aa11.34□□□□□ -0.59
LINC00342-202ENST00000448494 DBF4Q9UBU7 674 aaPredicted RBP11.34□□□□□ -0.59
LINC00342-202ENST00000448494 STK39Q9UEW8 545 aa11.34□□□□□ -0.59
LINC00342-202ENST00000448494 PCDHB6Q9Y5E3 794 aa11.34□□□□□ -0.59
LINC00342-202ENST00000448494 MINK1Q8N4C8 1332 aaPredicted RBP11.34□□□□□ -0.59
LINC00342-202ENST00000448494 FAM25EA8MYX2 175 aa11.34□□□□□ -0.59
LINC00342-202ENST00000448494 GOLGA8MH3BSY2 632 aa11.34□□□□□ -0.59
LINC00342-202ENST00000448494 PSMA7O14818 248 aa11.34□□□□□ -0.59
LINC00342-202ENST00000448494 PEX1O43933 1283 aa11.34□□□□□ -0.59
LINC00342-202ENST00000448494 EDF1O60869 148 aaKnown RBP11.34□□□□□ -0.59
LINC00342-202ENST00000448494 SULT1C4O75897 302 aa11.34□□□□□ -0.59
LINC00342-202ENST00000448494 FKBP9O95302 570 aa11.34□□□□□ -0.59
LINC00342-202ENST00000448494 BAG2O95816 211 aa11.34□□□□□ -0.59
LINC00342-202ENST00000448494 BMP15O95972 392 aa11.34□□□□□ -0.59
LINC00342-202ENST00000448494 RPN1P04843 607 aaKnown RBP11.34□□□□□ -0.59
LINC00342-202ENST00000448494 TFPTP0C1Z6 253 aa11.34□□□□□ -0.59
LINC00342-202ENST00000448494 RPL17P18621 184 aaKnown RBP11.34□□□□□ -0.59
LINC00342-202ENST00000448494 PGM1P36871 562 aa11.34□□□□□ -0.59
LINC00342-202ENST00000448494 PTENP60484 403 aa11.34□□□□□ -0.59
LINC00342-202ENST00000448494 IRX4P78413 519 aa11.34□□□□□ -0.59
LINC00342-202ENST00000448494 LRRC63Q05C16 580 aa11.34□□□□□ -0.59
LINC00342-202ENST00000448494 DHX34Q14147 1143 aaKnown RBP11.34□□□□□ -0.59
LINC00342-202ENST00000448494 MPP2Q14168 576 aa11.34□□□□□ -0.59
LINC00342-202ENST00000448494 SF3B4Q15427 424 aaKnown RBP eCLIP11.34□□□□□ -0.59
LINC00342-202ENST00000448494 TMEM266Q2M3C6 531 aa11.34□□□□□ -0.59
LINC00342-202ENST00000448494 MIIPQ5JXC2 388 aa11.34□□□□□ -0.59
LINC00342-202ENST00000448494 USP43Q70EL4 1123 aa11.34□□□□□ -0.59
LINC00342-202ENST00000448494 DHDDSQ86SQ9 333 aa11.34□□□□□ -0.59
LINC00342-202ENST00000448494 CSGALNACT2Q8N6G5 542 aa11.34□□□□□ -0.59
LINC00342-202ENST00000448494 SDCCAG3Q96C92 435 aa11.34□□□□□ -0.59
LINC00342-202ENST00000448494 TRIM51Q9BSJ1 452 aa11.34□□□□□ -0.59
LINC00342-202ENST00000448494 CELF4Q9BZC1 486 aaKnown RBP11.34□□□□□ -0.59
LINC00342-202ENST00000448494 CCSER1Q9C0I3 900 aa11.34□□□□□ -0.59
LINC00342-202ENST00000448494 MLXIPLQ9NP71 852 aa11.34□□□□□ -0.59
LINC00342-202ENST00000448494 MRGBPQ9NV56 204 aa11.34□□□□□ -0.59
LINC00342-202ENST00000448494 THAP1Q9NVV9 213 aa11.34□□□□□ -0.59
LINC00342-202ENST00000448494 IGSF9Q9P2J2 1179 aa11.34□□□□□ -0.59
LINC00342-202ENST00000448494 PCDHGA11Q9Y5H2 935 aa11.34□□□□□ -0.59
LINC00342-202ENST00000448494 ECM29Q5VYK3 1845 aa11.34□□□□□ -0.59
LINC00342-202ENST00000448494 PIK3C2AO00443 1686 aa11.34□□□□□ -0.59
LINC00342-202ENST00000448494 PALLDQ8WX93 1383 aa11.33□□□□□ -0.59
LINC00342-202ENST00000448494 ADGRA3Q8IWK6 1321 aa11.33□□□□□ -0.6
LINC00342-202ENST00000448494 PVALEFA0A1B0GWK0 134 aa11.33□□□□□ -0.6
LINC00342-202ENST00000448494 TRIM49BA6NDI0 452 aa11.33□□□□□ -0.6
LINC00342-202ENST00000448494 RSPH10B2B2RC85 870 aa11.33□□□□□ -0.6
LINC00342-202ENST00000448494 AP3B1O00203 1094 aa11.33□□□□□ -0.6
LINC00342-202ENST00000448494 RSL1D1O76021 490 aaKnown RBP11.33□□□□□ -0.6
LINC00342-202ENST00000448494 MMP1P03956 469 aa11.33□□□□□ -0.6
LINC00342-202ENST00000448494 RSPH10BP0C881 870 aa11.33□□□□□ -0.6
LINC00342-202ENST00000448494 HSPD1P10809 573 aaKnown RBP11.33□□□□□ -0.6
LINC00342-202ENST00000448494 ITGA4P13612 1032 aa11.33□□□□□ -0.6
LINC00342-202ENST00000448494 LMNB1P20700 586 aa11.33□□□□□ -0.6
LINC00342-202ENST00000448494 RCVRNP35243 200 aa11.33□□□□□ -0.6
LINC00342-202ENST00000448494 MTIF2P46199 727 aaKnown RBP11.33□□□□□ -0.6
LINC00342-202ENST00000448494 METAP2P50579 478 aaKnown RBP eCLIP11.33□□□□□ -0.6
LINC00342-202ENST00000448494 C21orf59P57076 290 aa11.33□□□□□ -0.6
LINC00342-202ENST00000448494 POLR2FP61218 127 aaKnown RBP11.33□□□□□ -0.6
LINC00342-202ENST00000448494 PDE1CQ14123 709 aaPredicted RBP11.33□□□□□ -0.6
LINC00342-202ENST00000448494 EPHA7Q15375 998 aa11.33□□□□□ -0.6
LINC00342-202ENST00000448494 EDRF1Q3B7T1 1238 aa11.33□□□□□ -0.6
LINC00342-202ENST00000448494 CDONQ4KMG0 1287 aa11.33□□□□□ -0.6
LINC00342-202ENST00000448494 SULT6B1Q6IMI4 303 aa11.33□□□□□ -0.6
LINC00342-202ENST00000448494 C4orf22Q6V702 233 aa11.33□□□□□ -0.6
LINC00342-202ENST00000448494 TRMT10CQ7L0Y3 403 aaKnown RBP11.33□□□□□ -0.6
LINC00342-202ENST00000448494 CCDC84Q86UT8 332 aaPredicted RBP11.33□□□□□ -0.6
LINC00342-202ENST00000448494 SLC51BQ86UW2 128 aa11.33□□□□□ -0.6
LINC00342-202ENST00000448494 ANKLE2Q86XL3 938 aa11.33□□□□□ -0.6
LINC00342-202ENST00000448494 METTL13Q8N6R0 699 aa11.33□□□□□ -0.6
LINC00342-202ENST00000448494 EXD1Q8NHP7 514 aa11.33□□□□□ -0.6
LINC00342-202ENST00000448494 ANGPTL6Q8NI99 470 aa11.33□□□□□ -0.6
LINC00342-202ENST00000448494 ACTRT2Q8TDY3 377 aa11.33□□□□□ -0.6
LINC00342-202ENST00000448494 SYN2Q92777 582 aaPredicted RBP11.33□□□□□ -0.6
LINC00342-202ENST00000448494 LBHD1Q9BQE6 289 aaPredicted RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms