RNA–Protein interactions for RNA: ENST00000428693.1

TTC3-208, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-208ENST00000428693 VARS2Q5ST30 1063 aaKnown RBP13.13□□□□□ -0.31
TTC3-208ENST00000428693 HYIQ5T013 277 aa13.13□□□□□ -0.31
TTC3-208ENST00000428693 ARL6IP4Q66PJ3 421 aaKnown RBP13.13□□□□□ -0.31
TTC3-208ENST00000428693 CWF19L1Q69YN2 538 aaKnown RBP13.13□□□□□ -0.31
TTC3-208ENST00000428693 PARM1Q6UWI2 310 aa13.13□□□□□ -0.31
TTC3-208ENST00000428693 ALKAL1Q6UXT8 129 aa13.13□□□□□ -0.31
TTC3-208ENST00000428693 RSPO2Q6UXX9 243 aaPredicted RBP13.13□□□□□ -0.31
TTC3-208ENST00000428693 ITFG1Q8TB96 612 aa13.13□□□□□ -0.31
TTC3-208ENST00000428693 NXPE3Q969Y0 559 aa13.13□□□□□ -0.31
TTC3-208ENST00000428693 RTP3Q9BQQ7 232 aa13.13□□□□□ -0.31
TTC3-208ENST00000428693 CYP4F11Q9HBI6 524 aa13.13□□□□□ -0.31
TTC3-208ENST00000428693 WNT16Q9UBV4 365 aa13.13□□□□□ -0.31
TTC3-208ENST00000428693 DAXXQ9UER7 740 aaPredicted RBP13.13□□□□□ -0.31
TTC3-208ENST00000428693 KRBA1A5PL33 1030 aa13.12□□□□□ -0.31
TTC3-208ENST00000428693 H0YCG3 227 aa13.12□□□□□ -0.31
TTC3-208ENST00000428693 H7C4K7 107 aa13.12□□□□□ -0.31
TTC3-208ENST00000428693 HNRNPDLO14979 420 aaKnown RBP13.12□□□□□ -0.31
TTC3-208ENST00000428693 TBCAO75347 108 aaKnown RBP13.12□□□□□ -0.31
TTC3-208ENST00000428693 MAPTP10636 758 aaKnown RBP13.12□□□□□ -0.31
TTC3-208ENST00000428693 NPR3P17342 541 aa13.12□□□□□ -0.31
TTC3-208ENST00000428693 PROZP22891 400 aa13.12□□□□□ -0.31
TTC3-208ENST00000428693 RPL9P32969 192 aaKnown RBP13.12□□□□□ -0.31
TTC3-208ENST00000428693 ROR1Q01973 937 aa13.12□□□□□ -0.31
TTC3-208ENST00000428693 HTR4Q13639 388 aa13.12□□□□□ -0.31
TTC3-208ENST00000428693 MCM6Q14566 821 aa13.12□□□□□ -0.31
TTC3-208ENST00000428693 KARSQ15046 597 aaKnown RBP13.12□□□□□ -0.31
TTC3-208ENST00000428693 SF3A1Q15459 793 aaKnown RBP13.12□□□□□ -0.31
TTC3-208ENST00000428693 UVSSAQ2YD98 709 aa13.12□□□□□ -0.31
TTC3-208ENST00000428693 CTXN3Q4LDR2 81 aa13.12□□□□□ -0.31
TTC3-208ENST00000428693 TMEM119Q4V9L6 283 aa13.12□□□□□ -0.31
TTC3-208ENST00000428693 CD300LGQ6UXG3 332 aa13.12□□□□□ -0.31
TTC3-208ENST00000428693 HAUS6Q7Z4H7 955 aa13.12□□□□□ -0.31
TTC3-208ENST00000428693 FGF13Q92913 245 aa13.12□□□□□ -0.31
TTC3-208ENST00000428693 KIF12Q96FN5 646 aa13.12□□□□□ -0.31
TTC3-208ENST00000428693 AK8Q96MA6 479 aa13.12□□□□□ -0.31
TTC3-208ENST00000428693 KXD1Q9BQD3 176 aa13.12□□□□□ -0.31
TTC3-208ENST00000428693 REEP2Q9BRK0 252 aa13.12□□□□□ -0.31
TTC3-208ENST00000428693 NTPCRQ9BSD7 190 aaKnown RBP13.12□□□□□ -0.31
TTC3-208ENST00000428693 RPP25Q9BUL9 199 aaKnown RBP13.12□□□□□ -0.31
TTC3-208ENST00000428693 TBC1D17Q9HA65 648 aa13.12□□□□□ -0.31
TTC3-208ENST00000428693 KCND2Q9NZV8 630 aa13.12□□□□□ -0.31
TTC3-208ENST00000428693 CNTN3Q9P232 1028 aa13.12□□□□□ -0.31
TTC3-208ENST00000428693 TUBGCP4Q9UGJ1 667 aa13.12□□□□□ -0.31
TTC3-208ENST00000428693 MRPS23Q9Y3D9 190 aaKnown RBP13.12□□□□□ -0.31
TTC3-208ENST00000428693 BACE2Q9Y5Z0 518 aa13.12□□□□□ -0.31
TTC3-208ENST00000428693 USP34Q70CQ2 3546 aa13.11□□□□□ -0.31
TTC3-208ENST00000428693 ABLIM1O14639 778 aa13.11□□□□□ -0.31
TTC3-208ENST00000428693 BMP15O95972 392 aa13.11□□□□□ -0.31
TTC3-208ENST00000428693 CPB1P15086 417 aa13.11□□□□□ -0.31
TTC3-208ENST00000428693 KCNE1P15382 129 aa13.11□□□□□ -0.31
TTC3-208ENST00000428693 PLCG1P19174 1290 aa13.11□□□□□ -0.31
TTC3-208ENST00000428693 HOXA9P31269 272 aa13.11□□□□□ -0.31
TTC3-208ENST00000428693 GPC5P78333 572 aa13.11□□□□□ -0.31
TTC3-208ENST00000428693 CEBPZQ03701 1054 aaKnown RBP13.11□□□□□ -0.31
TTC3-208ENST00000428693 GRIN1Q05586 938 aa13.11□□□□□ -0.31
TTC3-208ENST00000428693 PPP2R3AQ06190 1150 aa13.11□□□□□ -0.31
TTC3-208ENST00000428693 SLC10A6Q3KNW5 377 aa13.11□□□□□ -0.31
TTC3-208ENST00000428693 ARSHQ5FYA8 562 aa13.11□□□□□ -0.31
TTC3-208ENST00000428693 XKR4Q5GH76 650 aa13.11□□□□□ -0.31
TTC3-208ENST00000428693 ZPBP2Q6X784 338 aa13.11□□□□□ -0.31
TTC3-208ENST00000428693 MTSS1LQ765P7 747 aa13.11□□□□□ -0.31
TTC3-208ENST00000428693 BRAPQ7Z569 592 aa13.11□□□□□ -0.31
TTC3-208ENST00000428693 TMEM130Q8N3G9 435 aa13.11□□□□□ -0.31
TTC3-208ENST00000428693 KCTD17Q8N5Z5 321 aa13.11□□□□□ -0.31
TTC3-208ENST00000428693 DTWD2Q8NBA8 298 aa13.11□□□□□ -0.31
TTC3-208ENST00000428693 APPL2Q8NEU8 664 aa13.11□□□□□ -0.31
TTC3-208ENST00000428693 FGF14Q92915 247 aa13.11□□□□□ -0.31
TTC3-208ENST00000428693 MCRS1Q96EZ8 462 aa13.11□□□□□ -0.31
TTC3-208ENST00000428693 TBC1D32Q96NH3 1257 aa13.11□□□□□ -0.31
TTC3-208ENST00000428693 CORO1BQ9BR76 489 aa13.11□□□□□ -0.31
TTC3-208ENST00000428693 ARHGEF3Q9NR81 526 aa13.11□□□□□ -0.31
TTC3-208ENST00000428693 DNMT3BQ9UBC3 853 aaKnown RBP13.11□□□□□ -0.31
TTC3-208ENST00000428693 ZFP37Q9Y6Q3 630 aaPredicted RBP13.11□□□□□ -0.31
TTC3-208ENST00000428693 WDR27A2RRH5 827 aa13.1□□□□□ -0.31
TTC3-208ENST00000428693 SYN3O14994 580 aa13.1□□□□□ -0.31
TTC3-208ENST00000428693 DCNP07585 359 aaKnown RBP13.1□□□□□ -0.31
TTC3-208ENST00000428693 RHOP08100 348 aa13.1□□□□□ -0.31
TTC3-208ENST00000428693 CLTAP09496 248 aa13.1□□□□□ -0.31
TTC3-208ENST00000428693 TNFSF9P41273 254 aa13.1□□□□□ -0.31
TTC3-208ENST00000428693 MCL1Q07820 350 aa13.1□□□□□ -0.31
TTC3-208ENST00000428693 SNW1Q13573 536 aaKnown RBP13.1□□□□□ -0.31
TTC3-208ENST00000428693 ANGPT1Q15389 498 aa13.1□□□□□ -0.31
TTC3-208ENST00000428693 ZNF280DQ6N043 979 aa13.1□□□□□ -0.31
TTC3-208ENST00000428693 DSTYKQ6XUX3 929 aa13.1□□□□□ -0.31
TTC3-208ENST00000428693 FRMD5Q7Z6J6 570 aa13.1□□□□□ -0.31
TTC3-208ENST00000428693 USP37Q86T82 979 aa13.1□□□□□ -0.31
TTC3-208ENST00000428693 ELMOD1Q8N336 334 aa13.1□□□□□ -0.31
TTC3-208ENST00000428693 ZNF461Q8TAF7 563 aa13.1□□□□□ -0.31
TTC3-208ENST00000428693 RAD54LQ92698 747 aa13.1□□□□□ -0.31
TTC3-208ENST00000428693 MSTO1Q9BUK6 570 aa13.1□□□□□ -0.31
TTC3-208ENST00000428693 RPF1Q9H9Y2 349 aaKnown RBP13.1□□□□□ -0.31
TTC3-208ENST00000428693 PARVGQ9HBI0 331 aa13.1□□□□□ -0.31
TTC3-208ENST00000428693 FBXL5Q9UKA1 691 aa13.1□□□□□ -0.31
TTC3-208ENST00000428693 ODF2LQ9ULJ1 636 aa13.1□□□□□ -0.31
TTC3-208ENST00000428693 TIMM13Q9Y5L4 95 aaPredicted RBP13.1□□□□□ -0.31
TTC3-208ENST00000428693 PTPRZ1P23471 2315 aaPredicted RBP13.1□□□□□ -0.31
TTC3-208ENST00000428693 MYO15AQ9UKN7 3530 aa13.09□□□□□ -0.31
TTC3-208ENST00000428693 ANHXE9PGG2 379 aa13.09□□□□□ -0.31
TTC3-208ENST00000428693 MEFVO15553 781 aaPredicted RBP13.09□□□□□ -0.31
TTC3-208ENST00000428693 TRAK2O60296 914 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms