RNA–Protein interactions for RNA: ENST00000422760.1

LSM8-203, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 1 (best) BASIC

Gene LSM8, Length 1,920 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-203ENST00000422760 BIRC3Q13489 604 aa24.73■■□□□ 1.55
LSM8-203ENST00000422760 HLTFQ14527 1009 aaKnown RBP eCLIP24.73■■□□□ 1.55
LSM8-203ENST00000422760 MAPK6Q16659 721 aa24.73■■□□□ 1.55
LSM8-203ENST00000422760 FAM153CQ494X1 144 aa24.73■■□□□ 1.55
LSM8-203ENST00000422760 C11orf63Q6NUN7 778 aa24.73■■□□□ 1.55
LSM8-203ENST00000422760 EFCAB13Q8IY85 973 aa24.73■■□□□ 1.55
LSM8-203ENST00000422760 ARL8AQ96BM9 186 aa24.73■■□□□ 1.55
LSM8-203ENST00000422760 AGPAT1Q99943 283 aa24.73■■□□□ 1.55
LSM8-203ENST00000422760 C2orf40Q9H1Z8 148 aa24.73■■□□□ 1.55
LSM8-203ENST00000422760 SEPT11Q9NVA2 429 aaKnown RBP24.73■■□□□ 1.55
LSM8-203ENST00000422760 FAM153AQ9UHL3 310 aa24.73■■□□□ 1.55
LSM8-203ENST00000422760 CLDN3O15551 220 aa24.72■■□□□ 1.55
LSM8-203ENST00000422760 PRKCBP05771 671 aa24.72■■□□□ 1.55
LSM8-203ENST00000422760 ZNF286BP0CG31 522 aa24.72■■□□□ 1.55
LSM8-203ENST00000422760 MRPS25P82663 173 aaKnown RBP24.72■■□□□ 1.55
LSM8-203ENST00000422760 PRPF4BQ13523 1007 aaKnown RBP24.72■■□□□ 1.55
LSM8-203ENST00000422760 ZACNQ401N2 412 aa24.72■■□□□ 1.55
LSM8-203ENST00000422760 EFCAB12Q6NXP0 572 aa24.72■■□□□ 1.55
LSM8-203ENST00000422760 SLC35G2Q8TBE7 412 aa24.72■■□□□ 1.55
LSM8-203ENST00000422760 EPS8L1Q8TE68 723 aa24.72■■□□□ 1.55
LSM8-203ENST00000422760 PIK3R5Q8WYR1 880 aa24.72■■□□□ 1.55
LSM8-203ENST00000422760 ELMO3Q96BJ8 720 aa24.72■■□□□ 1.55
LSM8-203ENST00000422760 NLRP4Q96MN2 994 aa24.72■■□□□ 1.55
LSM8-203ENST00000422760 TINF2Q9BSI4 451 aa24.72■■□□□ 1.55
LSM8-203ENST00000422760 PI4K2AQ9BTU6 479 aa24.72■■□□□ 1.55
LSM8-203ENST00000422760 CPA4Q9UI42 421 aa24.72■■□□□ 1.55
LSM8-203ENST00000422760 UTP11Q9Y3A2 253 aaKnown RBP24.72■■□□□ 1.55
LSM8-203ENST00000422760 DOCK3Q8IZD9 2030 aa24.71■■□□□ 1.55
LSM8-203ENST00000422760 ESYT3A0FGR9 886 aa24.71■■□□□ 1.55
LSM8-203ENST00000422760 TOM1L1O75674 476 aa24.71■■□□□ 1.55
LSM8-203ENST00000422760 INSRRP14616 1297 aa24.71■■□□□ 1.55
LSM8-203ENST00000422760 MAGEA9P43362 315 aa24.71■■□□□ 1.55
LSM8-203ENST00000422760 IGBP1P78318 339 aa24.71■■□□□ 1.55
LSM8-203ENST00000422760 TDRD10Q5VZ19 366 aaKnown RBP24.71■■□□□ 1.55
LSM8-203ENST00000422760 B4GALNT4Q76KP1 1039 aa24.71■■□□□ 1.55
LSM8-203ENST00000422760 RASAL3Q86YV0 1011 aa24.71■■□□□ 1.55
LSM8-203ENST00000422760 HINFPQ9BQA5 517 aa24.71■■□□□ 1.55
LSM8-203ENST00000422760 GRIN2DO15399 1336 aa24.71■■□□□ 1.55
LSM8-203ENST00000422760 FAM187AA6NFU0 413 aa24.71■■□□□ 1.55
LSM8-203ENST00000422760 ZC3H11AO75152 810 aaKnown RBP eCLIP24.71■■□□□ 1.55
LSM8-203ENST00000422760 TFDP1Q14186 410 aa24.71■■□□□ 1.55
LSM8-203ENST00000422760 SEZ6Q53EL9 994 aa24.71■■□□□ 1.55
LSM8-203ENST00000422760 ZNF484Q5JVG2 852 aa24.71■■□□□ 1.55
LSM8-203ENST00000422760 NPLOC4Q8TAT6 608 aa24.71■■□□□ 1.55
LSM8-203ENST00000422760 ZNF668Q96K58 619 aaPredicted RBP24.71■■□□□ 1.55
LSM8-203ENST00000422760 ACO2Q99798 780 aaKnown RBP24.71■■□□□ 1.55
LSM8-203ENST00000422760 SLC15A5A6NIM6 579 aa24.7■■□□□ 1.54
LSM8-203ENST00000422760 IGF2BP3O00425 579 aaKnown RBP eCLIP24.7■■□□□ 1.54
LSM8-203ENST00000422760 FAM189A1O60320 539 aa24.7■■□□□ 1.54
LSM8-203ENST00000422760 BUB1BO60566 1050 aaPredicted RBP24.7■■□□□ 1.54
LSM8-203ENST00000422760 C4BPAP04003 597 aaKnown RBP24.7■■□□□ 1.54
LSM8-203ENST00000422760 SMPD1P17405 629 aa24.7■■□□□ 1.54
LSM8-203ENST00000422760 GUCY2FP51841 1108 aa24.7■■□□□ 1.54
LSM8-203ENST00000422760 TATDN2Q93075 761 aa24.7■■□□□ 1.54
LSM8-203ENST00000422760 CGRRF1Q99675 332 aa24.7■■□□□ 1.54
LSM8-203ENST00000422760 ABHD16BQ9H3Z7 469 aa24.7■■□□□ 1.54
LSM8-203ENST00000422760 C1orf112Q9NSG2 853 aa24.7■■□□□ 1.54
LSM8-203ENST00000422760 TAS2R14Q9NYV8 317 aa24.7■■□□□ 1.54
LSM8-203ENST00000422760 NOCTQ9UK39 431 aaKnown RBP24.7■■□□□ 1.54
LSM8-203ENST00000422760 CNTNAP2Q9UHC6 1331 aa24.7■■□□□ 1.54
LSM8-203ENST00000422760 ZSCAN5CA6NGD5 496 aaPredicted RBP24.69■■□□□ 1.54
LSM8-203ENST00000422760 CYP26A1O43174 497 aa24.69■■□□□ 1.54
LSM8-203ENST00000422760 ERLIN2O94905 339 aa24.69■■□□□ 1.54
LSM8-203ENST00000422760 ECHS1P30084 290 aa24.69■■□□□ 1.54
LSM8-203ENST00000422760 PTENP60484 403 aa24.69■■□□□ 1.54
LSM8-203ENST00000422760 GCNT1Q02742 428 aa24.69■■□□□ 1.54
LSM8-203ENST00000422760 DHX34Q14147 1143 aaKnown RBP24.69■■□□□ 1.54
LSM8-203ENST00000422760 ZBTB33Q86T24 672 aa24.69■■□□□ 1.54
LSM8-203ENST00000422760 C16orf70Q9BSU1 422 aa24.69■■□□□ 1.54
LSM8-203ENST00000422760 ABLIM1O14639 778 aa24.69■■□□□ 1.54
LSM8-203ENST00000422760 MTA2O94776 668 aa24.69■■□□□ 1.54
LSM8-203ENST00000422760 SGPL1O95470 568 aa24.69■■□□□ 1.54
LSM8-203ENST00000422760 HLA-DRAP01903 254 aa24.69■■□□□ 1.54
LSM8-203ENST00000422760 MYZAPP0CAP1 466 aa24.69■■□□□ 1.54
LSM8-203ENST00000422760 NR1D1P20393 614 aa24.69■■□□□ 1.54
LSM8-203ENST00000422760 PIK3CAP42336 1068 aa24.69■■□□□ 1.54
LSM8-203ENST00000422760 ZNF157P51786 506 aaPredicted RBP24.69■■□□□ 1.54
LSM8-203ENST00000422760 ACVR2BQ13705 512 aa24.69■■□□□ 1.54
LSM8-203ENST00000422760 DUSP28Q4G0W2 176 aa24.69■■□□□ 1.54
LSM8-203ENST00000422760 NOP9Q86U38 636 aaKnown RBP24.69■■□□□ 1.54
LSM8-203ENST00000422760 SLC47A2Q86VL8 602 aa24.69■■□□□ 1.54
LSM8-203ENST00000422760 BRSK2Q8IWQ3 736 aa24.69■■□□□ 1.54
LSM8-203ENST00000422760 RPUSD2Q8IZ73 545 aaKnown RBP24.69■■□□□ 1.54
LSM8-203ENST00000422760 BCAS4Q8TDM0 211 aa24.69■■□□□ 1.54
LSM8-203ENST00000422760 PPM1EQ8WY54 764 aa24.69■■□□□ 1.54
LSM8-203ENST00000422760 DHX38Q92620 1227 aaKnown RBP24.69■■□□□ 1.54
LSM8-203ENST00000422760 RUNDC3BQ96NL0 473 aa24.69■■□□□ 1.54
LSM8-203ENST00000422760 TCHPQ9BT92 498 aa24.69■■□□□ 1.54
LSM8-203ENST00000422760 TMBIM4Q9HC24 238 aa24.69■■□□□ 1.54
LSM8-203ENST00000422760 ACP6Q9NPH0 428 aa24.69■■□□□ 1.54
LSM8-203ENST00000422760 PLAAQ9Y263 795 aa24.69■■□□□ 1.54
LSM8-203ENST00000422760 DDX3YO15523 660 aaKnown RBP24.68■■□□□ 1.54
LSM8-203ENST00000422760 KRT14P02533 472 aa24.68■■□□□ 1.54
LSM8-203ENST00000422760 GZMAP12544 262 aa24.68■■□□□ 1.54
LSM8-203ENST00000422760 TNFSF9P41273 254 aa24.68■■□□□ 1.54
LSM8-203ENST00000422760 DRG2P55039 364 aaKnown RBP24.68■■□□□ 1.54
LSM8-203ENST00000422760 EIF3BP55884 814 aaKnown RBP24.68■■□□□ 1.54
LSM8-203ENST00000422760 RNASE9P60153 205 aaKnown RBP24.68■■□□□ 1.54
LSM8-203ENST00000422760 AGBL2Q5U5Z8 902 aa24.68■■□□□ 1.54
LSM8-203ENST00000422760 UBL4BQ8N7F7 174 aa24.68■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms