RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 PLEKHH3Q7Z736 793 aa6.31□□□□□ -1.4
LSM5-206ENST00000409987 LGI4Q8N135 537 aa6.31□□□□□ -1.4
LSM5-206ENST00000409987 BRIX1Q8TDN6 353 aaKnown RBP6.31□□□□□ -1.4
LSM5-206ENST00000409987 LRRC37BQ96QE4 947 aa6.31□□□□□ -1.4
LSM5-206ENST00000409987 LMF1Q96S06 567 aa6.31□□□□□ -1.4
LSM5-206ENST00000409987 LRRC27Q9C0I9 530 aa6.31□□□□□ -1.4
LSM5-206ENST00000409987 MEGF9Q9H1U4 602 aa6.31□□□□□ -1.4
LSM5-206ENST00000409987 SEC61A2Q9H9S3 476 aa6.31□□□□□ -1.4
LSM5-206ENST00000409987 RSAD1Q9HA92 442 aa6.31□□□□□ -1.4
LSM5-206ENST00000409987 SIDT1Q9NXL6 827 aaKnown RBP6.31□□□□□ -1.4
LSM5-206ENST00000409987 PNPLA7Q6ZV29 1317 aa6.3□□□□□ -1.4
LSM5-206ENST00000409987 CDC14BO60729 498 aa6.3□□□□□ -1.4
LSM5-206ENST00000409987 C8AP07357 584 aa6.3□□□□□ -1.4
LSM5-206ENST00000409987 ATP5JP18859 108 aa6.3□□□□□ -1.4
LSM5-206ENST00000409987 SLC7A1P30825 629 aa6.3□□□□□ -1.4
LSM5-206ENST00000409987 SLC6A4P31645 630 aa6.3□□□□□ -1.4
LSM5-206ENST00000409987 EPHB4P54760 987 aa6.3□□□□□ -1.4
LSM5-206ENST00000409987 CREMQ03060 361 aa6.3□□□□□ -1.4
LSM5-206ENST00000409987 FAM111BQ6SJ93 734 aa6.3□□□□□ -1.4
LSM5-206ENST00000409987 TOGARAM2Q6ZUX3 1019 aa6.3□□□□□ -1.4
LSM5-206ENST00000409987 SRLQ86TD4 932 aa6.3□□□□□ -1.4
LSM5-206ENST00000409987 C1QL4Q86Z23 238 aa6.3□□□□□ -1.4
LSM5-206ENST00000409987 SP8Q8IXZ3 490 aa6.3□□□□□ -1.4
LSM5-206ENST00000409987 IL17RDQ8NFM7 739 aa6.3□□□□□ -1.4
LSM5-206ENST00000409987 PPM1EQ8WY54 764 aa6.3□□□□□ -1.4
LSM5-206ENST00000409987 PHKBQ93100 1093 aa6.3□□□□□ -1.4
LSM5-206ENST00000409987 ARL8AQ96BM9 186 aa6.3□□□□□ -1.4
LSM5-206ENST00000409987 BORCS6Q96GS4 357 aa6.3□□□□□ -1.4
LSM5-206ENST00000409987 MYD88Q99836 296 aa6.3□□□□□ -1.4
LSM5-206ENST00000409987 NDC1Q9BTX1 674 aa6.3□□□□□ -1.4
LSM5-206ENST00000409987 PLA2G12BQ9BX93 195 aa6.3□□□□□ -1.4
LSM5-206ENST00000409987 BTBD1Q9H0C5 482 aa6.3□□□□□ -1.4
LSM5-206ENST00000409987 MSL2Q9HCI7 577 aa6.3□□□□□ -1.4
LSM5-206ENST00000409987 SARS2Q9NP81 518 aaKnown RBP6.3□□□□□ -1.4
LSM5-206ENST00000409987 DAAM1Q9Y4D1 1078 aa6.3□□□□□ -1.4
LSM5-206ENST00000409987 DUSP10Q9Y6W6 482 aa6.3□□□□□ -1.4
LSM5-206ENST00000409987 TCRBV7S2A1N4TA0A589 114 aa6.29□□□□□ -1.4
LSM5-206ENST00000409987 PRSS29PA6NIE9 313 aa6.29□□□□□ -1.4
LSM5-206ENST00000409987 KIAA0391O15091 583 aaKnown RBP6.29□□□□□ -1.4
LSM5-206ENST00000409987 TBX3O15119 743 aa6.29□□□□□ -1.4
LSM5-206ENST00000409987 PJA2O43164 708 aa6.29□□□□□ -1.4
LSM5-206ENST00000409987 MATN4O95460 622 aa6.29□□□□□ -1.4
LSM5-206ENST00000409987 SNRPA1P09661 255 aaKnown RBP6.29□□□□□ -1.4
LSM5-206ENST00000409987 MTHFD1P11586 935 aaKnown RBP6.29□□□□□ -1.4
LSM5-206ENST00000409987 HDCP19113 662 aa6.29□□□□□ -1.4
LSM5-206ENST00000409987 CFPP27918 469 aa6.29□□□□□ -1.4
LSM5-206ENST00000409987 PIK3CGP48736 1102 aa6.29□□□□□ -1.4
LSM5-206ENST00000409987 PRIM2P49643 509 aa6.29□□□□□ -1.4
LSM5-206ENST00000409987 IFIT5Q13325 482 aaKnown RBP6.29□□□□□ -1.4
LSM5-206ENST00000409987 ATP2B3Q16720 1220 aa6.29□□□□□ -1.4
LSM5-206ENST00000409987 CCDC93Q567U6 631 aa6.29□□□□□ -1.4
LSM5-206ENST00000409987 C10orf62Q5T681 223 aaPredicted RBP6.29□□□□□ -1.4
LSM5-206ENST00000409987 ZNF529Q6P280 563 aa6.29□□□□□ -1.4
LSM5-206ENST00000409987 XRRA1Q6P2D8 792 aa6.29□□□□□ -1.4
LSM5-206ENST00000409987 XYLT1Q86Y38 959 aa6.29□□□□□ -1.4
LSM5-206ENST00000409987 LRRC56Q8IYG6 542 aaPredicted RBP6.29□□□□□ -1.4
LSM5-206ENST00000409987 NME8Q8N427 588 aa6.29□□□□□ -1.4
LSM5-206ENST00000409987 TNPO1Q92973 898 aaKnown RBP6.29□□□□□ -1.4
LSM5-206ENST00000409987 PGBD4Q96DM1 585 aa6.29□□□□□ -1.4
LSM5-206ENST00000409987 TNIP3Q96KP6 325 aa6.29□□□□□ -1.4
LSM5-206ENST00000409987 ZNF512Q96ME7 567 aaPredicted RBP6.29□□□□□ -1.4
LSM5-206ENST00000409987 NAP1L4Q99733 375 aaKnown RBP6.29□□□□□ -1.4
LSM5-206ENST00000409987 LSM14BQ9BX40 385 aaKnown RBP6.29□□□□□ -1.4
LSM5-206ENST00000409987 EPC1Q9H2F5 836 aa6.29□□□□□ -1.4
LSM5-206ENST00000409987 NELFAQ9H3P2 528 aa6.29□□□□□ -1.4
LSM5-206ENST00000409987 NLRC4Q9NPP4 1024 aa6.29□□□□□ -1.4
LSM5-206ENST00000409987 USP40Q9NVE5 1235 aa6.29□□□□□ -1.4
LSM5-206ENST00000409987 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.29□□□□□ -1.4
LSM5-206ENST00000409987 CORO2BQ9UQ03 480 aa6.29□□□□□ -1.4
LSM5-206ENST00000409987 RHPN2P1A8MT19 583 aa6.28□□□□□ -1.4
LSM5-206ENST00000409987 B5MCH6 92 aa6.28□□□□□ -1.4
LSM5-206ENST00000409987 FGAP02671 866 aa6.28□□□□□ -1.4
LSM5-206ENST00000409987 ZKSCAN1P17029 563 aaPredicted RBP6.28□□□□□ -1.4
LSM5-206ENST00000409987 CASP5P51878 434 aa6.28□□□□□ -1.4
LSM5-206ENST00000409987 SOX8P57073 446 aa6.28□□□□□ -1.4
LSM5-206ENST00000409987 CLRN1P58418 232 aa6.28□□□□□ -1.4
LSM5-206ENST00000409987 RAP2BP61225 183 aa6.28□□□□□ -1.4
LSM5-206ENST00000409987 EXOSC9Q06265 439 aaKnown RBP6.28□□□□□ -1.4
LSM5-206ENST00000409987 POU5F1BQ06416 359 aa6.28□□□□□ -1.4
LSM5-206ENST00000409987 CSRP2Q16527 193 aa6.28□□□□□ -1.4
LSM5-206ENST00000409987 FKBP15Q5T1M5 1219 aa6.28□□□□□ -1.4
LSM5-206ENST00000409987 EMC10Q5UCC4 262 aa6.28□□□□□ -1.4
LSM5-206ENST00000409987 CLEC4GQ6UXB4 293 aa6.28□□□□□ -1.4
LSM5-206ENST00000409987 UBE3BQ7Z3V4 1068 aa6.28□□□□□ -1.4
LSM5-206ENST00000409987 TAX1BP1Q86VP1 789 aa6.28□□□□□ -1.4
LSM5-206ENST00000409987 FAM186BQ8IYM0 893 aa6.28□□□□□ -1.4
LSM5-206ENST00000409987 TMEM176AQ96HP8 235 aa6.28□□□□□ -1.4
LSM5-206ENST00000409987 P2RX7Q99572 595 aaKnown RBP6.28□□□□□ -1.4
LSM5-206ENST00000409987 KIAA1586Q9HCI6 787 aa6.28□□□□□ -1.4
LSM5-206ENST00000409987 SLAMF7Q9NQ25 335 aa6.28□□□□□ -1.4
LSM5-206ENST00000409987 CNNM1Q9NRU3 951 aa6.28□□□□□ -1.4
LSM5-206ENST00000409987 FBXO34Q9NWN3 711 aa6.28□□□□□ -1.4
LSM5-206ENST00000409987 PIH1D1Q9NWS0 290 aaKnown RBP6.28□□□□□ -1.4
LSM5-206ENST00000409987 CPNE7Q9UBL6 633 aa6.28□□□□□ -1.4
LSM5-206ENST00000409987 TBKBP1A7MCY6 615 aa6.27□□□□□ -1.41
LSM5-206ENST00000409987 ISM1B1AKI9 464 aa6.27□□□□□ -1.41
LSM5-206ENST00000409987 RASA4BC9J798 803 aa6.27□□□□□ -1.41
LSM5-206ENST00000409987 KPNA5O15131 536 aa6.27□□□□□ -1.41
LSM5-206ENST00000409987 RASA4O43374 803 aa6.27□□□□□ -1.41
LSM5-206ENST00000409987 LAMTOR5O43504 91 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms