RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 FAM107AO95990 144 aa17.97■□□□□ 0.47
NUP50-203ENST00000407019 ACO1P21399 889 aaKnown RBP17.97■□□□□ 0.47
NUP50-203ENST00000407019 ALDH5A1P51649 535 aaPredicted RBP17.97■□□□□ 0.47
NUP50-203ENST00000407019 FSTL1Q12841 308 aa17.97■□□□□ 0.47
NUP50-203ENST00000407019 SLMAPQ14BN4 828 aa17.97■□□□□ 0.47
NUP50-203ENST00000407019 PPP1R7Q15435 360 aa17.97■□□□□ 0.47
NUP50-203ENST00000407019 SGO2Q562F6 1265 aa17.97■□□□□ 0.47
NUP50-203ENST00000407019 TRIM72Q6ZMU5 477 aa17.97■□□□□ 0.47
NUP50-203ENST00000407019 MON1BQ7L1V2 547 aa17.97■□□□□ 0.47
NUP50-203ENST00000407019 PPM1EQ8WY54 764 aa17.97■□□□□ 0.47
NUP50-203ENST00000407019 SLCO2A1Q92959 643 aa17.97■□□□□ 0.47
NUP50-203ENST00000407019 ART4Q93070 314 aa17.97■□□□□ 0.47
NUP50-203ENST00000407019 CEP89Q96ST8 783 aa17.97■□□□□ 0.47
NUP50-203ENST00000407019 TRIM7Q9C029 511 aa17.97■□□□□ 0.47
NUP50-203ENST00000407019 APOBEC3GQ9HC16 384 aaKnown RBP17.97■□□□□ 0.47
NUP50-203ENST00000407019 PPANQ9NQ55 473 aaKnown RBP17.97■□□□□ 0.47
NUP50-203ENST00000407019 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.97■□□□□ 0.47
NUP50-203ENST00000407019 MYH9P35579 1960 aaKnown RBP17.97■□□□□ 0.47
NUP50-203ENST00000407019 A0A087WUV0 522 aaPredicted RBP17.97■□□□□ 0.47
NUP50-203ENST00000407019 CAND2O75155 1236 aa17.97■□□□□ 0.47
NUP50-203ENST00000407019 CDR1P51861 262 aa17.97■□□□□ 0.47
NUP50-203ENST00000407019 LIN9Q5TKA1 542 aa17.97■□□□□ 0.47
NUP50-203ENST00000407019 MICALCLQ6ZW33 695 aa17.97■□□□□ 0.47
NUP50-203ENST00000407019 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.97■□□□□ 0.47
NUP50-203ENST00000407019 CYFIP2Q96F07 1278 aa17.97■□□□□ 0.47
NUP50-203ENST00000407019 TMEM134Q9H6X4 195 aa17.97■□□□□ 0.47
NUP50-203ENST00000407019 CNOT10Q9H9A5 744 aaKnown RBP17.97■□□□□ 0.47
NUP50-203ENST00000407019 FBXO40Q9UH90 709 aa17.97■□□□□ 0.47
NUP50-203ENST00000407019 PCDHB4Q9Y5E5 795 aa17.97■□□□□ 0.47
NUP50-203ENST00000407019 A0A0B4J269 797 aa17.96■□□□□ 0.47
NUP50-203ENST00000407019 PAEPP09466 180 aa17.96■□□□□ 0.47
NUP50-203ENST00000407019 CLTAP09496 248 aa17.96■□□□□ 0.47
NUP50-203ENST00000407019 UBA1P22314 1058 aaKnown RBP17.96■□□□□ 0.47
NUP50-203ENST00000407019 TBXAS1P24557 533 aaPredicted RBP17.96■□□□□ 0.47
NUP50-203ENST00000407019 TMOD1P28289 359 aa17.96■□□□□ 0.47
NUP50-203ENST00000407019 BYSLQ13895 437 aaKnown RBP17.96■□□□□ 0.47
NUP50-203ENST00000407019 ZBTB41Q5SVQ8 909 aa17.96■□□□□ 0.47
NUP50-203ENST00000407019 PHLDB2Q86SQ0 1253 aa17.96■□□□□ 0.47
NUP50-203ENST00000407019 CROCCP2Q86T23 111 aa17.96■□□□□ 0.47
NUP50-203ENST00000407019 PGM2Q96G03 612 aa17.96■□□□□ 0.47
NUP50-203ENST00000407019 MTFR1LQ9H019 292 aa17.96■□□□□ 0.47
NUP50-203ENST00000407019 SEMA4AQ9H3S1 761 aa17.96■□□□□ 0.47
NUP50-203ENST00000407019 WDR90Q96KV7 1748 aa17.96■□□□□ 0.47
NUP50-203ENST00000407019 GMNCA6NCL1 334 aa17.95■□□□□ 0.46
NUP50-203ENST00000407019 PROSCO94903 275 aa17.95■□□□□ 0.46
NUP50-203ENST00000407019 POTEJP0CG39 1038 aa17.95■□□□□ 0.46
NUP50-203ENST00000407019 GNA15P30679 374 aa17.95■□□□□ 0.46
NUP50-203ENST00000407019 MAN1A1P33908 653 aa17.95■□□□□ 0.46
NUP50-203ENST00000407019 KRT17Q04695 432 aa17.95■□□□□ 0.46
NUP50-203ENST00000407019 CALCOCO2Q13137 446 aa17.95■□□□□ 0.46
NUP50-203ENST00000407019 PRKG1Q13976 671 aa17.95■□□□□ 0.46
NUP50-203ENST00000407019 SLC29A2Q14542 456 aa17.95■□□□□ 0.46
NUP50-203ENST00000407019 LLGL1Q15334 1064 aa17.95■□□□□ 0.46
NUP50-203ENST00000407019 TMEM270Q6UE05 265 aa17.95■□□□□ 0.46
NUP50-203ENST00000407019 C3orf20Q8ND61 904 aa17.95■□□□□ 0.46
NUP50-203ENST00000407019 C1orf54Q8WWF1 131 aa17.95■□□□□ 0.46
NUP50-203ENST00000407019 NRBP2Q9NSY0 501 aa17.95■□□□□ 0.46
NUP50-203ENST00000407019 ADGRA2Q96PE1 1338 aa17.95■□□□□ 0.46
NUP50-203ENST00000407019 GSTTP1A0A1W2PQM5 241 aa17.95■□□□□ 0.46
NUP50-203ENST00000407019 TRAPPC3O43617 180 aa17.95■□□□□ 0.46
NUP50-203ENST00000407019 FARP2O94887 1054 aaPredicted RBP17.95■□□□□ 0.46
NUP50-203ENST00000407019 RARGP13631 454 aa17.95■□□□□ 0.46
NUP50-203ENST00000407019 NOMO3P69849 1222 aa17.95■□□□□ 0.46
NUP50-203ENST00000407019 NOP14P78316 857 aaKnown RBP17.95■□□□□ 0.46
NUP50-203ENST00000407019 SLC20A2Q08357 652 aa17.95■□□□□ 0.46
NUP50-203ENST00000407019 CAPSQ13938 189 aa17.95■□□□□ 0.46
NUP50-203ENST00000407019 TARBP2Q15633 366 aaKnown RBP17.95■□□□□ 0.46
NUP50-203ENST00000407019 C2CD6Q53TS8 623 aa17.95■□□□□ 0.46
NUP50-203ENST00000407019 LLGL2Q6P1M3 1020 aa17.95■□□□□ 0.46
NUP50-203ENST00000407019 TADA2BQ86TJ2 420 aa17.95■□□□□ 0.46
NUP50-203ENST00000407019 ABRAQ8N0Z2 381 aa17.95■□□□□ 0.46
NUP50-203ENST00000407019 RBBP8NLQ8NC74 664 aaPredicted RBP17.95■□□□□ 0.46
NUP50-203ENST00000407019 DDX27Q96GQ7 796 aaKnown RBP17.95■□□□□ 0.46
NUP50-203ENST00000407019 PCYT2Q99447 389 aa17.95■□□□□ 0.46
NUP50-203ENST00000407019 C11orf70Q9BRQ4 267 aa17.95■□□□□ 0.46
NUP50-203ENST00000407019 GPRC5DQ9NZD1 345 aa17.95■□□□□ 0.46
NUP50-203ENST00000407019 CNTNAP2Q9UHC6 1331 aa17.95■□□□□ 0.46
NUP50-203ENST00000407019 RIPK2O43353 540 aa17.94■□□□□ 0.46
NUP50-203ENST00000407019 KIAA0754O94854 1291 aa17.94■□□□□ 0.46
NUP50-203ENST00000407019 EDN1P05305 212 aa17.94■□□□□ 0.46
NUP50-203ENST00000407019 FGFR4P22455 802 aa17.94■□□□□ 0.46
NUP50-203ENST00000407019 PPARDQ03181 441 aa17.94■□□□□ 0.46
NUP50-203ENST00000407019 ADCY2Q08462 1091 aa17.94■□□□□ 0.46
NUP50-203ENST00000407019 PTP4A2Q12974 167 aa17.94■□□□□ 0.46
NUP50-203ENST00000407019 SNX1Q13596 522 aa17.94■□□□□ 0.46
NUP50-203ENST00000407019 FAM160B1Q5W0V3 765 aa17.94■□□□□ 0.46
NUP50-203ENST00000407019 PPP1R2P3Q6NXS1 205 aa17.94■□□□□ 0.46
NUP50-203ENST00000407019 LBX2Q6XYB7 198 aa17.94■□□□□ 0.46
NUP50-203ENST00000407019 SYDE1Q6ZW31 735 aaPredicted RBP17.94■□□□□ 0.46
NUP50-203ENST00000407019 PASD1Q8IV76 773 aa17.94■□□□□ 0.46
NUP50-203ENST00000407019 MRPL47Q9HD33 250 aaKnown RBP17.94■□□□□ 0.46
NUP50-203ENST00000407019 ADAM22Q9P0K1 906 aa17.94■□□□□ 0.46
NUP50-203ENST00000407019 WHRNQ9P202 907 aa17.94■□□□□ 0.46
NUP50-203ENST00000407019 CNTN6Q9UQ52 1028 aa17.94■□□□□ 0.46
NUP50-203ENST00000407019 ADCY3O60266 1144 aa17.94■□□□□ 0.46
NUP50-203ENST00000407019 CFHP08603 1231 aa17.94■□□□□ 0.46
NUP50-203ENST00000407019 HARSP12081 509 aaKnown RBP17.94■□□□□ 0.46
NUP50-203ENST00000407019 TREML2Q5T2D2 321 aa17.94■□□□□ 0.46
NUP50-203ENST00000407019 PHF13Q86YI8 300 aaPredicted RBP17.94■□□□□ 0.46
NUP50-203ENST00000407019 RIOX2Q8IUF8 465 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms