RNA–Protein interactions for RNA: ENST00000398316.7

FNDC3A-202, Transcript of fibronectin type III domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene FNDC3A, Length 5,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3A-202ENST00000398316 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.97□□□□□ -1.77
FNDC3A-202ENST00000398316 OFD1O75665 1012 aa3.97□□□□□ -1.77
FNDC3A-202ENST00000398316 ABLIM3O94929 683 aa3.97□□□□□ -1.77
FNDC3A-202ENST00000398316 KLRC1P26715 233 aa3.97□□□□□ -1.77
FNDC3A-202ENST00000398316 ZNF75DP51815 510 aa3.97□□□□□ -1.77
FNDC3A-202ENST00000398316 GSDMDP57764 484 aa3.97□□□□□ -1.77
FNDC3A-202ENST00000398316 ENOX2Q16206 610 aaKnown RBP3.97□□□□□ -1.77
FNDC3A-202ENST00000398316 UPP1Q16831 310 aa3.97□□□□□ -1.77
FNDC3A-202ENST00000398316 CCDC142Q17RM4 750 aa3.97□□□□□ -1.77
FNDC3A-202ENST00000398316 KIAA0753Q2KHM9 967 aa3.97□□□□□ -1.77
FNDC3A-202ENST00000398316 TCTN1Q2MV58 587 aa3.97□□□□□ -1.77
FNDC3A-202ENST00000398316 PLA2G4FQ68DD2 849 aa3.97□□□□□ -1.77
FNDC3A-202ENST00000398316 MMS22LQ6ZRQ5 1243 aa3.97□□□□□ -1.77
FNDC3A-202ENST00000398316 BHLHA9Q7RTU4 235 aa3.97□□□□□ -1.77
FNDC3A-202ENST00000398316 USP37Q86T82 979 aa3.97□□□□□ -1.77
FNDC3A-202ENST00000398316 PHF13Q86YI8 300 aaPredicted RBP3.97□□□□□ -1.77
FNDC3A-202ENST00000398316 CCDC112Q8NEF3 446 aa3.97□□□□□ -1.77
FNDC3A-202ENST00000398316 PRPF31Q8WWY3 499 aaKnown RBP3.97□□□□□ -1.77
FNDC3A-202ENST00000398316 PAWRQ96IZ0 340 aaKnown RBP3.97□□□□□ -1.77
FNDC3A-202ENST00000398316 STK33Q9BYT3 514 aa3.97□□□□□ -1.77
FNDC3A-202ENST00000398316 TMEM117Q9H0C3 514 aa3.97□□□□□ -1.77
FNDC3A-202ENST00000398316 SUCLA2Q9P2R7 463 aaPredicted RBP3.97□□□□□ -1.77
FNDC3A-202ENST00000398316 HDAC6Q9UBN7 1215 aa3.97□□□□□ -1.77
FNDC3A-202ENST00000398316 COL5A1P20908 1838 aaPredicted RBP3.97□□□□□ -1.77
FNDC3A-202ENST00000398316 hCG_1642624A0A1W2PR95 340 aa3.96□□□□□ -1.77
FNDC3A-202ENST00000398316 LRRIQ3A6PVS8 624 aaPredicted RBP3.96□□□□□ -1.77
FNDC3A-202ENST00000398316 ZBBXA8MT70 800 aa3.96□□□□□ -1.77
FNDC3A-202ENST00000398316 PTGESO14684 152 aa3.96□□□□□ -1.77
FNDC3A-202ENST00000398316 PEX14O75381 377 aa3.96□□□□□ -1.77
FNDC3A-202ENST00000398316 FAM155BO75949 473 aa3.96□□□□□ -1.77
FNDC3A-202ENST00000398316 AKAP3O75969 853 aa3.96□□□□□ -1.77
FNDC3A-202ENST00000398316 GLI1P08151 1106 aa3.96□□□□□ -1.77
FNDC3A-202ENST00000398316 CLTBP09497 229 aa3.96□□□□□ -1.77
FNDC3A-202ENST00000398316 TMCO4Q5TGY1 634 aa3.96□□□□□ -1.77
FNDC3A-202ENST00000398316 PM20D1Q6GTS8 502 aa3.96□□□□□ -1.77
FNDC3A-202ENST00000398316 NCAPH2Q6IBW4 605 aa3.96□□□□□ -1.77
FNDC3A-202ENST00000398316 SLC8B1Q6J4K2 584 aa3.96□□□□□ -1.77
FNDC3A-202ENST00000398316 NSMFQ6X4W1 530 aa3.96□□□□□ -1.77
FNDC3A-202ENST00000398316 LRRC8DQ7L1W4 858 aa3.96□□□□□ -1.77
FNDC3A-202ENST00000398316 WHAMMQ8TF30 809 aa3.96□□□□□ -1.77
FNDC3A-202ENST00000398316 EXOC1Q9NV70 894 aa3.96□□□□□ -1.77
FNDC3A-202ENST00000398316 HSPBP1Q9NZL4 362 aa3.96□□□□□ -1.77
FNDC3A-202ENST00000398316 EFR3BQ9Y2G0 817 aa3.96□□□□□ -1.77
FNDC3A-202ENST00000398316 PCDHA11Q9Y5I1 949 aa3.96□□□□□ -1.77
FNDC3A-202ENST00000398316 CKAP5Q14008 2032 aa3.96□□□□□ -1.77
FNDC3A-202ENST00000398316 SRGAP2BP0DMP2 458 aa3.96□□□□□ -1.78
FNDC3A-202ENST00000398316 FGFR1P11362 822 aa3.96□□□□□ -1.78
FNDC3A-202ENST00000398316 ARF4P18085 180 aaPredicted RBP3.96□□□□□ -1.78
FNDC3A-202ENST00000398316 TRIM32Q13049 653 aa3.96□□□□□ -1.78
FNDC3A-202ENST00000398316 STIM1Q13586 685 aa3.96□□□□□ -1.78
FNDC3A-202ENST00000398316 SLC10A6Q3KNW5 377 aa3.96□□□□□ -1.78
FNDC3A-202ENST00000398316 FAM173BQ6P4H8 233 aa3.96□□□□□ -1.78
FNDC3A-202ENST00000398316 SLC24A5Q71RS6 500 aa3.96□□□□□ -1.78
FNDC3A-202ENST00000398316 MINDY3Q9H8M7 445 aa3.96□□□□□ -1.78
FNDC3A-202ENST00000398316 PRDM5Q9NQX1 630 aaPredicted RBP3.96□□□□□ -1.78
FNDC3A-202ENST00000398316 ZNF500O60304 480 aaPredicted RBP3.96□□□□□ -1.78
FNDC3A-202ENST00000398316 KIF4AO95239 1232 aa3.96□□□□□ -1.78
FNDC3A-202ENST00000398316 IGLV3-27P01718 113 aa3.96□□□□□ -1.78
FNDC3A-202ENST00000398316 MYBP10242 640 aa3.96□□□□□ -1.78
FNDC3A-202ENST00000398316 UNGP13051 313 aaPredicted RBP3.96□□□□□ -1.78
FNDC3A-202ENST00000398316 PPP3CCP48454 512 aa3.96□□□□□ -1.78
FNDC3A-202ENST00000398316 ERVK-21P61565 698 aa3.96□□□□□ -1.78
FNDC3A-202ENST00000398316 PPIGQ13427 754 aaKnown RBP eCLIP3.96□□□□□ -1.787e-7■■□□□ 13.5
FNDC3A-202ENST00000398316 KRT31Q15323 416 aa3.96□□□□□ -1.78
FNDC3A-202ENST00000398316 KLHDC7AQ5VTJ3 777 aa3.96□□□□□ -1.78
FNDC3A-202ENST00000398316 EFCAB12Q6NXP0 572 aa3.96□□□□□ -1.78
FNDC3A-202ENST00000398316 MSANTD2Q6P1R3 559 aa3.96□□□□□ -1.78
FNDC3A-202ENST00000398316 C16orf59Q7L2K0 433 aa3.96□□□□□ -1.78
FNDC3A-202ENST00000398316 DDX53Q86TM3 631 aaKnown RBP3.96□□□□□ -1.78
FNDC3A-202ENST00000398316 ZBTB8OSQ8IWT0 167 aa3.96□□□□□ -1.78
FNDC3A-202ENST00000398316 TMEM40Q8WWA1 233 aa3.96□□□□□ -1.78
FNDC3A-202ENST00000398316 PGBD4Q96DM1 585 aa3.96□□□□□ -1.78
FNDC3A-202ENST00000398316 IFT74Q96LB3 600 aa3.96□□□□□ -1.78
FNDC3A-202ENST00000398316 TRPV5Q9NQA5 729 aa3.96□□□□□ -1.78
FNDC3A-202ENST00000398316 OBP2AQ9NY56 170 aa3.96□□□□□ -1.78
FNDC3A-202ENST00000398316 HHLA1C9JL84 531 aa3.96□□□□□ -1.78
FNDC3A-202ENST00000398316 NOP56O00567 594 aaKnown RBP3.96□□□□□ -1.78
FNDC3A-202ENST00000398316 FMO5P49326 533 aa3.96□□□□□ -1.78
FNDC3A-202ENST00000398316 COPB1P53618 953 aaKnown RBP3.96□□□□□ -1.78
FNDC3A-202ENST00000398316 TERF1P54274 439 aa3.96□□□□□ -1.78
FNDC3A-202ENST00000398316 ZBED6P86452 979 aa3.96□□□□□ -1.78
FNDC3A-202ENST00000398316 CENPCQ03188 943 aa3.96□□□□□ -1.78
FNDC3A-202ENST00000398316 ZNF33AQ06730 810 aa3.96□□□□□ -1.78
FNDC3A-202ENST00000398316 CTTNQ14247 550 aaKnown RBP3.96□□□□□ -1.78
FNDC3A-202ENST00000398316 TAF12Q16514 161 aa3.96□□□□□ -1.78
FNDC3A-202ENST00000398316 LILRA6Q6PI73 481 aa3.96□□□□□ -1.78
FNDC3A-202ENST00000398316 MAMSTRQ6ZN01 415 aa3.96□□□□□ -1.78
FNDC3A-202ENST00000398316 SLC22A17Q8WUG5 538 aa3.96□□□□□ -1.78
FNDC3A-202ENST00000398316 NELFBQ8WX92 580 aa3.96□□□□□ -1.78
FNDC3A-202ENST00000398316 SLCO2A1Q92959 643 aa3.96□□□□□ -1.78
FNDC3A-202ENST00000398316 LARP6Q9BRS8 491 aaKnown RBP3.96□□□□□ -1.78
FNDC3A-202ENST00000398316 ZCWPW1Q9H0M4 648 aa3.96□□□□□ -1.78
FNDC3A-202ENST00000398316 MLXIPQ9HAP2 919 aa3.96□□□□□ -1.78
FNDC3A-202ENST00000398316 ANKRD63C9JTQ0 380 aa3.96□□□□□ -1.78
FNDC3A-202ENST00000398316 PRKCBP05771 671 aa3.96□□□□□ -1.78
FNDC3A-202ENST00000398316 ARHGAP25P42331 645 aa3.96□□□□□ -1.78
FNDC3A-202ENST00000398316 CCDC173Q0VFZ6 552 aa3.96□□□□□ -1.78
FNDC3A-202ENST00000398316 SCAPQ12770 1279 aa3.96□□□□□ -1.78
FNDC3A-202ENST00000398316 TUBB2AQ13885 445 aa3.96□□□□□ -1.78
FNDC3A-202ENST00000398316 CFAP221Q4G0U5 840 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms