RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 TUBB8Q3ZCM7 444 aa25.38■■□□□ 1.65
PABPN1-202ENST00000397276 TMEM270Q6UE05 265 aa25.38■■□□□ 1.65
PABPN1-202ENST00000397276 PCYT2Q99447 389 aa25.38■■□□□ 1.65
PABPN1-202ENST00000397276 APOBEC3GQ9HC16 384 aaKnown RBP25.38■■□□□ 1.65
PABPN1-202ENST00000397276 LTBP3Q9NS15 1303 aa25.37■■□□□ 1.65
PABPN1-202ENST00000397276 FAM187AA6NFU0 413 aa25.37■■□□□ 1.65
PABPN1-202ENST00000397276 UNGP13051 313 aaPredicted RBP25.37■■□□□ 1.65
PABPN1-202ENST00000397276 SNX1Q13596 522 aa25.37■■□□□ 1.65
PABPN1-202ENST00000397276 GADL1Q6ZQY3 521 aa25.37■■□□□ 1.65
PABPN1-202ENST00000397276 MCOLN2Q8IZK6 566 aa25.37■■□□□ 1.65
PABPN1-202ENST00000397276 OR5B17Q8NGF7 314 aa25.37■■□□□ 1.65
PABPN1-202ENST00000397276 UHMK1Q8TAS1 419 aaKnown RBP25.37■■□□□ 1.65
PABPN1-202ENST00000397276 C1orf54Q8WWF1 131 aa25.37■■□□□ 1.65
PABPN1-202ENST00000397276 SNCAIPQ9Y6H5 919 aa25.37■■□□□ 1.65
PABPN1-202ENST00000397276 GSTTP1A0A1W2PQM5 241 aa25.37■■□□□ 1.65
PABPN1-202ENST00000397276 ATG7O95352 703 aa25.37■■□□□ 1.65
PABPN1-202ENST00000397276 FAM107AO95990 144 aa25.37■■□□□ 1.65
PABPN1-202ENST00000397276 ACTN3Q08043 901 aaPredicted RBP25.37■■□□□ 1.65
PABPN1-202ENST00000397276 LY6KQ17RY6 165 aa25.37■■□□□ 1.65
PABPN1-202ENST00000397276 ZDHHC24Q6UX98 284 aa25.37■■□□□ 1.65
PABPN1-202ENST00000397276 DNERQ8NFT8 737 aa25.37■■□□□ 1.65
PABPN1-202ENST00000397276 FAM212AQ96EL1 285 aa25.37■■□□□ 1.65
PABPN1-202ENST00000397276 ZNF668Q96K58 619 aaPredicted RBP25.37■■□□□ 1.65
PABPN1-202ENST00000397276 KIAA1586Q9HCI6 787 aa25.37■■□□□ 1.65
PABPN1-202ENST00000397276 PCDHB4Q9Y5E5 795 aa25.37■■□□□ 1.65
PABPN1-202ENST00000397276 PCDHB2Q9Y5E7 798 aa25.37■■□□□ 1.65
PABPN1-202ENST00000397276 UMODL1Q5DID0 1318 aa25.36■■□□□ 1.65
PABPN1-202ENST00000397276 MYPNQ86TC9 1320 aa25.36■■□□□ 1.65
PABPN1-202ENST00000397276 NAMPTP43490 491 aa25.36■■□□□ 1.65
PABPN1-202ENST00000397276 CLUL1Q15846 466 aa25.36■■□□□ 1.65
PABPN1-202ENST00000397276 CHADLQ6NUI6 762 aa25.36■■□□□ 1.65
PABPN1-202ENST00000397276 ENOSF1Q7L5Y1 443 aa25.36■■□□□ 1.65
PABPN1-202ENST00000397276 ZBTB33Q86T24 672 aa25.36■■□□□ 1.65
PABPN1-202ENST00000397276 CHST13Q8NET6 341 aa25.36■■□□□ 1.65
PABPN1-202ENST00000397276 MTUS1Q9ULD2 1270 aa25.36■■□□□ 1.65
PABPN1-202ENST00000397276 ATXN2Q99700 1313 aaKnown RBP25.36■■□□□ 1.65
PABPN1-202ENST00000397276 SHBGP04278 402 aa25.36■■□□□ 1.65
PABPN1-202ENST00000397276 ARL2P36404 184 aa25.36■■□□□ 1.65
PABPN1-202ENST00000397276 UBAP2Q5T6F2 1119 aaKnown RBP25.36■■□□□ 1.65
PABPN1-202ENST00000397276 LBX2Q6XYB7 198 aa25.36■■□□□ 1.65
PABPN1-202ENST00000397276 MORC4Q8TE76 937 aa25.36■■□□□ 1.65
PABPN1-202ENST00000397276 NSFP46459 744 aaKnown RBP25.35■■□□□ 1.65
PABPN1-202ENST00000397276 EMC10Q5UCC4 262 aa25.35■■□□□ 1.65
PABPN1-202ENST00000397276 MICALCLQ6ZW33 695 aa25.35■■□□□ 1.65
PABPN1-202ENST00000397276 C11orf70Q9BRQ4 267 aa25.35■■□□□ 1.65
PABPN1-202ENST00000397276 TCHPQ9BT92 498 aa25.35■■□□□ 1.65
PABPN1-202ENST00000397276 KLC4Q9NSK0 619 aa25.35■■□□□ 1.65
PABPN1-202ENST00000397276 GRHL1Q9NZI5 618 aa25.35■■□□□ 1.65
PABPN1-202ENST00000397276 MYH9P35579 1960 aaKnown RBP25.35■■□□□ 1.65
PABPN1-202ENST00000397276 MROH7Q68CQ1 1323 aa25.35■■□□□ 1.65
PABPN1-202ENST00000397276 SOWAHBA6NEL2 793 aa25.35■■□□□ 1.65
PABPN1-202ENST00000397276 SMIM23A6NLE4 172 aa25.35■■□□□ 1.65
PABPN1-202ENST00000397276 ZC3H11AO75152 810 aaKnown RBP eCLIP25.35■■□□□ 1.652e-9■■□□□ 14
PABPN1-202ENST00000397276 FARP2O94887 1054 aaPredicted RBP25.35■■□□□ 1.65
PABPN1-202ENST00000397276 ICAM3P32942 547 aa25.35■■□□□ 1.65
PABPN1-202ENST00000397276 COILP38432 576 aaPredicted RBP25.35■■□□□ 1.65
PABPN1-202ENST00000397276 STAT5BP51692 787 aa25.35■■□□□ 1.65
PABPN1-202ENST00000397276 C6orf89Q6UWU4 347 aa25.35■■□□□ 1.65
PABPN1-202ENST00000397276 RUFY4Q6ZNE9 571 aa25.35■■□□□ 1.65
PABPN1-202ENST00000397276 ATP2C2O75185 946 aa25.34■■□□□ 1.65
PABPN1-202ENST00000397276 PPFIA2O75334 1257 aa25.34■■□□□ 1.65
PABPN1-202ENST00000397276 HSPA6P17066 643 aa25.34■■□□□ 1.65
PABPN1-202ENST00000397276 NF2P35240 595 aa25.34■■□□□ 1.65
PABPN1-202ENST00000397276 TNFSF9P41273 254 aa25.34■■□□□ 1.65
PABPN1-202ENST00000397276 CAPSQ13938 189 aa25.34■■□□□ 1.65
PABPN1-202ENST00000397276 PCYOX1Q9UHG3 505 aa25.34■■□□□ 1.65
PABPN1-202ENST00000397276 SRGAP2CP0DJJ0 459 aa25.34■■□□□ 1.65
PABPN1-202ENST00000397276 TCF7P36402 384 aaPredicted RBP25.34■■□□□ 1.65
PABPN1-202ENST00000397276 PMS2P54278 862 aa25.34■■□□□ 1.65
PABPN1-202ENST00000397276 CLDN10P78369 228 aa25.34■■□□□ 1.65
PABPN1-202ENST00000397276 SF3A3Q12874 501 aaKnown RBP eCLIP25.34■■□□□ 1.651e-7■■□□□ 13.8
PABPN1-202ENST00000397276 TRIM50Q86XT4 487 aa25.34■■□□□ 1.65
PABPN1-202ENST00000397276 SLC40A1Q9NP59 571 aa25.34■■□□□ 1.65
PABPN1-202ENST00000397276 DDX20Q9UHI6 824 aaKnown RBP25.34■■□□□ 1.65
PABPN1-202ENST00000397276 CD2APQ9Y5K6 639 aa25.34■■□□□ 1.65
PABPN1-202ENST00000397276 STYXL1Q9Y6J8 313 aa25.34■■□□□ 1.65
PABPN1-202ENST00000397276 BRCA1P38398 1863 aaKnown RBP25.34■■□□□ 1.65
PABPN1-202ENST00000397276 ARID2Q68CP9 1835 aa25.34■■□□□ 1.65
PABPN1-202ENST00000397276 TLDC2A0PJX2 215 aa25.33■■□□□ 1.65
PABPN1-202ENST00000397276 DNM1LO00429 736 aa25.33■■□□□ 1.65
PABPN1-202ENST00000397276 GJB6O95452 261 aa25.33■■□□□ 1.65
PABPN1-202ENST00000397276 GGPS1O95749 300 aa25.33■■□□□ 1.65
PABPN1-202ENST00000397276 MAGOHP61326 146 aaKnown RBP25.33■■□□□ 1.65
PABPN1-202ENST00000397276 CUL2Q13617 745 aa25.33■■□□□ 1.65
PABPN1-202ENST00000397276 SIX1Q15475 284 aaPredicted RBP25.33■■□□□ 1.65
PABPN1-202ENST00000397276 NOL9Q5SY16 702 aaKnown RBP25.33■■□□□ 1.65
PABPN1-202ENST00000397276 YTHDF3Q7Z739 585 aaKnown RBP25.33■■□□□ 1.65
PABPN1-202ENST00000397276 SPATS2Q86XZ4 545 aaKnown RBP25.33■■□□□ 1.65
PABPN1-202ENST00000397276 PRPF31Q8WWY3 499 aaKnown RBP25.33■■□□□ 1.65
PABPN1-202ENST00000397276 ATG4AQ8WYN0 398 aa25.33■■□□□ 1.65
PABPN1-202ENST00000397276 NUB1Q9Y5A7 615 aa25.33■■□□□ 1.65
PABPN1-202ENST00000397276 ADM5C9JUS6 153 aa25.33■■□□□ 1.65
PABPN1-202ENST00000397276 O00370 1275 aa25.33■■□□□ 1.65
PABPN1-202ENST00000397276 PGK2P07205 417 aa25.33■■□□□ 1.65
PABPN1-202ENST00000397276 GJC1P36383 396 aa25.33■■□□□ 1.65
PABPN1-202ENST00000397276 SH3D19Q5HYK7 790 aa25.33■■□□□ 1.65
PABPN1-202ENST00000397276 OSBPL7Q9BZF2 842 aa25.33■■□□□ 1.65
PABPN1-202ENST00000397276 GNA15P30679 374 aa25.33■■□□□ 1.64
PABPN1-202ENST00000397276 SLFN12LQ6IEE8 588 aa25.33■■□□□ 1.64
PABPN1-202ENST00000397276 TXLNGYQ9BZA5 131 aa25.33■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms