RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 CNNM1Q9NRU3 951 aa6.09□□□□□ -1.43
HMGB1P10-201ENST00000395823 SIDT1Q9NXL6 827 aaKnown RBP6.09□□□□□ -1.43
HMGB1P10-201ENST00000395823 ADAM29Q9UKF5 820 aa6.09□□□□□ -1.43
HMGB1P10-201ENST00000395823 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.09□□□□□ -1.43
HMGB1P10-201ENST00000395823 DGKBQ9Y6T7 804 aa6.09□□□□□ -1.43
HMGB1P10-201ENST00000395823 ADAMTS3O15072 1205 aa6.08□□□□□ -1.44
HMGB1P10-201ENST00000395823 ABHD16AO95870 558 aa6.08□□□□□ -1.44
HMGB1P10-201ENST00000395823 JUNP05412 331 aaKnown RBP6.08□□□□□ -1.44
HMGB1P10-201ENST00000395823 JUNBP17275 347 aaPredicted RBP6.08□□□□□ -1.44
HMGB1P10-201ENST00000395823 GRK6P43250 576 aa6.08□□□□□ -1.44
HMGB1P10-201ENST00000395823 PHKA1P46020 1223 aa6.08□□□□□ -1.44
HMGB1P10-201ENST00000395823 SARSP49591 514 aaKnown RBP6.08□□□□□ -1.44
HMGB1P10-201ENST00000395823 RENBPP51606 427 aa6.08□□□□□ -1.44
HMGB1P10-201ENST00000395823 POU5F1BQ06416 359 aa6.08□□□□□ -1.44
HMGB1P10-201ENST00000395823 RALBP1Q15311 655 aa6.08□□□□□ -1.44
HMGB1P10-201ENST00000395823 GAGE13Q4V321 117 aa6.08□□□□□ -1.44
HMGB1P10-201ENST00000395823 CCDC93Q567U6 631 aa6.08□□□□□ -1.44
HMGB1P10-201ENST00000395823 OTUD7BQ6GQQ9 843 aa6.08□□□□□ -1.44
HMGB1P10-201ENST00000395823 LDHAL6AQ6ZMR3 332 aa6.08□□□□□ -1.44
HMGB1P10-201ENST00000395823 FRMD5Q7Z6J6 570 aa6.08□□□□□ -1.44
HMGB1P10-201ENST00000395823 ADGRE4PQ86SQ3 457 aa6.08□□□□□ -1.44
HMGB1P10-201ENST00000395823 ANKRD53Q8N9V6 530 aa6.08□□□□□ -1.44
HMGB1P10-201ENST00000395823 SLC35B2Q8TB61 432 aa6.08□□□□□ -1.44
HMGB1P10-201ENST00000395823 CFHR4Q92496 578 aa6.08□□□□□ -1.44
HMGB1P10-201ENST00000395823 C18orf8Q96DM3 657 aa6.08□□□□□ -1.44
HMGB1P10-201ENST00000395823 RPL10LQ96L21 214 aaKnown RBP6.08□□□□□ -1.44
HMGB1P10-201ENST00000395823 SIGLEC10Q96LC7 697 aa6.08□□□□□ -1.44
HMGB1P10-201ENST00000395823 CDC5LQ99459 802 aaKnown RBP6.08□□□□□ -1.44
HMGB1P10-201ENST00000395823 BRIP1Q9BX63 1249 aa6.08□□□□□ -1.44
HMGB1P10-201ENST00000395823 CASS4Q9NQ75 786 aa6.08□□□□□ -1.44
HMGB1P10-201ENST00000395823 SACM1LQ9NTJ5 587 aa6.08□□□□□ -1.44
HMGB1P10-201ENST00000395823 MYO1AQ9UBC5 1043 aa6.08□□□□□ -1.44
HMGB1P10-201ENST00000395823 BTN3A1O00481 513 aa6.07□□□□□ -1.44
HMGB1P10-201ENST00000395823 NRP1O14786 923 aa6.07□□□□□ -1.44
HMGB1P10-201ENST00000395823 IL1R1P14778 569 aa6.07□□□□□ -1.44
HMGB1P10-201ENST00000395823 FGFR2P21802 821 aa6.07□□□□□ -1.44
HMGB1P10-201ENST00000395823 PDIA3P30101 505 aaKnown RBP6.07□□□□□ -1.44
HMGB1P10-201ENST00000395823 TECP42680 631 aa6.07□□□□□ -1.44
HMGB1P10-201ENST00000395823 GALNT1Q10472 559 aaPredicted RBP6.07□□□□□ -1.44
HMGB1P10-201ENST00000395823 KIF22Q14807 665 aa6.07□□□□□ -1.44
HMGB1P10-201ENST00000395823 PUM3Q15397 648 aaKnown RBP6.07□□□□□ -1.44
HMGB1P10-201ENST00000395823 PABPC1LQ4VXU2 614 aaKnown RBP6.07□□□□□ -1.44
HMGB1P10-201ENST00000395823 FAM47AQ5JRC9 791 aa6.07□□□□□ -1.44
HMGB1P10-201ENST00000395823 SEM1Q6ZVN7 128 aa6.07□□□□□ -1.44
HMGB1P10-201ENST00000395823 USP30Q70CQ3 517 aa6.07□□□□□ -1.44
HMGB1P10-201ENST00000395823 SMAP1Q8IYB5 467 aaPredicted RBP6.07□□□□□ -1.44
HMGB1P10-201ENST00000395823 ADGRG2Q8IZP9 1017 aa6.07□□□□□ -1.44
HMGB1P10-201ENST00000395823 MYCT1Q8N699 235 aa6.07□□□□□ -1.44
HMGB1P10-201ENST00000395823 ATP11CQ8NB49 1132 aa6.07□□□□□ -1.44
HMGB1P10-201ENST00000395823 FBXO15Q8NCQ5 510 aaPredicted RBP6.07□□□□□ -1.44
HMGB1P10-201ENST00000395823 IL17RDQ8NFM7 739 aa6.07□□□□□ -1.44
HMGB1P10-201ENST00000395823 PNISRQ8TF01 805 aaKnown RBP6.07□□□□□ -1.44
HMGB1P10-201ENST00000395823 PWWP2AQ96N64 755 aa6.07□□□□□ -1.44
HMGB1P10-201ENST00000395823 SCLT1Q96NL6 688 aa6.07□□□□□ -1.44
HMGB1P10-201ENST00000395823 NDC1Q9BTX1 674 aa6.07□□□□□ -1.44
HMGB1P10-201ENST00000395823 TMEM168Q9H0V1 697 aa6.07□□□□□ -1.44
HMGB1P10-201ENST00000395823 AGO4Q9HCK5 861 aaKnown RBP6.07□□□□□ -1.44
HMGB1P10-201ENST00000395823 SLAMF7Q9NQ25 335 aa6.07□□□□□ -1.44
HMGB1P10-201ENST00000395823 FAM53CQ9NYF3 392 aa6.07□□□□□ -1.44
HMGB1P10-201ENST00000395823 SRRDQ9UH36 339 aa6.07□□□□□ -1.44
HMGB1P10-201ENST00000395823 ZDHHC8Q9ULC8 765 aa6.07□□□□□ -1.44
HMGB1P10-201ENST00000395823 SLC45A2Q9UMX9 530 aa6.07□□□□□ -1.44
HMGB1P10-201ENST00000395823 IRAK3Q9Y616 596 aa6.07□□□□□ -1.44
HMGB1P10-201ENST00000395823 A0A1B0GTL3 188 aa6.06□□□□□ -1.44
HMGB1P10-201ENST00000395823 TCRBV7S2A1N4TA0A589 114 aa6.06□□□□□ -1.44
HMGB1P10-201ENST00000395823 CXorf49A8MYA2 514 aaPredicted RBP6.06□□□□□ -1.44
HMGB1P10-201ENST00000395823 ETV2O00321 342 aaPredicted RBP6.06□□□□□ -1.44
HMGB1P10-201ENST00000395823 TEX33O43247 280 aa6.06□□□□□ -1.44
HMGB1P10-201ENST00000395823 TLR5O60602 858 aa6.06□□□□□ -1.44
HMGB1P10-201ENST00000395823 PLA2G6O60733 806 aa6.06□□□□□ -1.44
HMGB1P10-201ENST00000395823 RAP2AP10114 183 aa6.06□□□□□ -1.44
HMGB1P10-201ENST00000395823 PI3P19957 117 aa6.06□□□□□ -1.44
HMGB1P10-201ENST00000395823 PPM1FP49593 454 aaPredicted RBP6.06□□□□□ -1.44
HMGB1P10-201ENST00000395823 NOMO3P69849 1222 aa6.06□□□□□ -1.44
HMGB1P10-201ENST00000395823 NFYCQ13952 458 aa6.06□□□□□ -1.44
HMGB1P10-201ENST00000395823 STARD3Q14849 445 aa6.06□□□□□ -1.44
HMGB1P10-201ENST00000395823 ELF2Q15723 593 aa6.06□□□□□ -1.44
HMGB1P10-201ENST00000395823 PDCD2Q16342 344 aaPredicted RBP6.06□□□□□ -1.44
HMGB1P10-201ENST00000395823 ARL13BQ3SXY8 428 aa6.06□□□□□ -1.44
HMGB1P10-201ENST00000395823 KRT40Q6A162 431 aa6.06□□□□□ -1.44
HMGB1P10-201ENST00000395823 KLHL36Q8N4N3 616 aa6.06□□□□□ -1.44
HMGB1P10-201ENST00000395823 TXNDC5Q8NBS9 432 aaKnown RBP6.06□□□□□ -1.44
HMGB1P10-201ENST00000395823 OR6B3Q8NGW1 331 aa6.06□□□□□ -1.44
HMGB1P10-201ENST00000395823 GDF15Q99988 308 aa6.06□□□□□ -1.44
HMGB1P10-201ENST00000395823 MRI1Q9BV20 369 aa6.06□□□□□ -1.44
HMGB1P10-201ENST00000395823 JADE2Q9NQC1 790 aa6.06□□□□□ -1.44
HMGB1P10-201ENST00000395823 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.06□□□□□ -1.44
HMGB1P10-201ENST00000395823 MOCS1Q9NZB8 636 aa6.06□□□□□ -1.44
HMGB1P10-201ENST00000395823 NTMQ9P121 344 aa6.06□□□□□ -1.44
HMGB1P10-201ENST00000395823 GPR52Q9Y2T5 361 aa6.06□□□□□ -1.44
HMGB1P10-201ENST00000395823 PNPLA7Q6ZV29 1317 aa6.05□□□□□ -1.44
HMGB1P10-201ENST00000395823 SH3D21A4FU49 640 aa6.05□□□□□ -1.44
HMGB1P10-201ENST00000395823 TMEM233B4DJY2 109 aa6.05□□□□□ -1.44
HMGB1P10-201ENST00000395823 MATN2O00339 956 aa6.05□□□□□ -1.44
HMGB1P10-201ENST00000395823 FFAR3O14843 346 aa6.05□□□□□ -1.44
HMGB1P10-201ENST00000395823 NPHP1O15259 732 aa6.05□□□□□ -1.44
HMGB1P10-201ENST00000395823 ARHGAP6O43182 974 aa6.05□□□□□ -1.44
HMGB1P10-201ENST00000395823 SLC43A1O75387 559 aa6.05□□□□□ -1.44
HMGB1P10-201ENST00000395823 DNAJB5O75953 348 aa6.05□□□□□ -1.44
HMGB1P10-201ENST00000395823 SASH1O94885 1247 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms