RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 FLAD1Q8NFF5 587 aa10.13□□□□□ -0.79
SF3A3-201ENST00000373019 PLBD2Q8NHP8 589 aa10.13□□□□□ -0.79
SF3A3-201ENST00000373019 RTL9Q8NET4 1388 aa10.13□□□□□ -0.79
SF3A3-201ENST00000373019 STK10O94804 968 aaKnown RBP10.13□□□□□ -0.79
SF3A3-201ENST00000373019 SCG2P13521 617 aa10.13□□□□□ -0.79
SF3A3-201ENST00000373019 RPL5P46777 297 aaKnown RBP10.13□□□□□ -0.79
SF3A3-201ENST00000373019 NLRX1Q86UT6 975 aa10.13□□□□□ -0.79
SF3A3-201ENST00000373019 CLIP3Q96DZ5 547 aa10.13□□□□□ -0.79
SF3A3-201ENST00000373019 PPP1R10Q96QC0 940 aaKnown RBP10.13□□□□□ -0.79
SF3A3-201ENST00000373019 CYTH2Q99418 400 aa10.13□□□□□ -0.79
SF3A3-201ENST00000373019 DNAJC17Q9NVM6 304 aaKnown RBP10.13□□□□□ -0.79
SF3A3-201ENST00000373019 NDE1Q9NXR1 346 aa10.13□□□□□ -0.79
SF3A3-201ENST00000373019 SPO11Q9Y5K1 396 aa10.13□□□□□ -0.79
SF3A3-201ENST00000373019 FADS3Q9Y5Q0 445 aa10.13□□□□□ -0.79
SF3A3-201ENST00000373019 UTRNP46939 3433 aa10.13□□□□□ -0.79
SF3A3-201ENST00000373019 SH3PXD2BA1X283 911 aa10.12□□□□□ -0.79
SF3A3-201ENST00000373019 RASA4BC9J798 803 aa10.12□□□□□ -0.79
SF3A3-201ENST00000373019 SPTLC1O15269 473 aa10.12□□□□□ -0.79
SF3A3-201ENST00000373019 RASA4O43374 803 aa10.12□□□□□ -0.79
SF3A3-201ENST00000373019 SLC9A1P19634 815 aa10.12□□□□□ -0.79
SF3A3-201ENST00000373019 EPS15P42566 896 aa10.12□□□□□ -0.79
SF3A3-201ENST00000373019 KCNJ1P48048 391 aa10.12□□□□□ -0.79
SF3A3-201ENST00000373019 RIPOR1Q6ZS17 1223 aa10.12□□□□□ -0.79
SF3A3-201ENST00000373019 RASSF3Q86WH2 238 aa10.12□□□□□ -0.79
SF3A3-201ENST00000373019 CCDC65Q8IXS2 484 aa10.12□□□□□ -0.79
SF3A3-201ENST00000373019 U2AF1L4Q8WU68 220 aaKnown RBP10.12□□□□□ -0.79
SF3A3-201ENST00000373019 PRPF31Q8WWY3 499 aaKnown RBP10.12□□□□□ -0.79
SF3A3-201ENST00000373019 AJAP1Q9UKB5 411 aaPredicted RBP10.12□□□□□ -0.79
SF3A3-201ENST00000373019 MYPNQ86TC9 1320 aa10.12□□□□□ -0.79
SF3A3-201ENST00000373019 UCHL3P15374 230 aa10.12□□□□□ -0.79
SF3A3-201ENST00000373019 HOXD11P31277 338 aaPredicted RBP10.12□□□□□ -0.79
SF3A3-201ENST00000373019 RFC4P35249 363 aa10.12□□□□□ -0.79
SF3A3-201ENST00000373019 PGM1P36871 562 aa10.12□□□□□ -0.79
SF3A3-201ENST00000373019 CHN2P52757 468 aa10.12□□□□□ -0.79
SF3A3-201ENST00000373019 AQP4P55087 323 aa10.12□□□□□ -0.79
SF3A3-201ENST00000373019 ACTR3P61158 418 aa10.12□□□□□ -0.79
SF3A3-201ENST00000373019 KIF22Q14807 665 aa10.12□□□□□ -0.79
SF3A3-201ENST00000373019 PDK3Q15120 406 aa10.12□□□□□ -0.79
SF3A3-201ENST00000373019 LRRC36Q1X8D7 754 aa10.12□□□□□ -0.79
SF3A3-201ENST00000373019 DYMQ7RTS9 669 aa10.12□□□□□ -0.79
SF3A3-201ENST00000373019 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.12□□□□□ -0.79
SF3A3-201ENST00000373019 FBXO6Q9NRD1 293 aaPredicted RBP10.12□□□□□ -0.79
SF3A3-201ENST00000373019 BLOC1S4Q9NUP1 217 aa10.12□□□□□ -0.79
SF3A3-201ENST00000373019 DCTN4Q9UJW0 460 aa10.12□□□□□ -0.79
SF3A3-201ENST00000373019 PCDHGB4Q9UN71 923 aa10.12□□□□□ -0.79
SF3A3-201ENST00000373019 STX8Q9UNK0 236 aa10.12□□□□□ -0.79
SF3A3-201ENST00000373019 PCDHGB5Q9Y5G0 923 aa10.12□□□□□ -0.79
SF3A3-201ENST00000373019 CDH16O75309 829 aa10.12□□□□□ -0.79
SF3A3-201ENST00000373019 HAUS5O94927 633 aa10.12□□□□□ -0.79
SF3A3-201ENST00000373019 CPA3P15088 417 aa10.12□□□□□ -0.79
SF3A3-201ENST00000373019 RPA3P35244 121 aaPredicted RBP10.12□□□□□ -0.79
SF3A3-201ENST00000373019 MARCKSL1P49006 195 aa10.12□□□□□ -0.79
SF3A3-201ENST00000373019 NAA20P61599 178 aa10.12□□□□□ -0.79
SF3A3-201ENST00000373019 TGFBIQ15582 683 aa10.12□□□□□ -0.79
SF3A3-201ENST00000373019 SLC1A5Q15758 541 aa10.12□□□□□ -0.79
SF3A3-201ENST00000373019 PFKFB3Q16875 520 aaPredicted RBP10.12□□□□□ -0.79
SF3A3-201ENST00000373019 NEPROQ6NW34 567 aa10.12□□□□□ -0.79
SF3A3-201ENST00000373019 LRRC6Q86X45 466 aa10.12□□□□□ -0.79
SF3A3-201ENST00000373019 BLIDQ8IZY5 108 aa10.12□□□□□ -0.79
SF3A3-201ENST00000373019 ANKRD35Q8N283 1001 aa10.12□□□□□ -0.79
SF3A3-201ENST00000373019 CLPTM1LQ96KA5 538 aa10.12□□□□□ -0.79
SF3A3-201ENST00000373019 FAM161BQ96MY7 647 aa10.12□□□□□ -0.79
SF3A3-201ENST00000373019 PWWP2AQ96N64 755 aa10.12□□□□□ -0.79
SF3A3-201ENST00000373019 HEY2Q9UBP5 337 aa10.12□□□□□ -0.79
SF3A3-201ENST00000373019 TRAF3IP3Q9Y228 551 aa10.12□□□□□ -0.79
SF3A3-201ENST00000373019 THSD7AQ9UPZ6 1657 aa10.11□□□□□ -0.79
SF3A3-201ENST00000373019 MAGEC1O60732 1142 aa10.11□□□□□ -0.79
SF3A3-201ENST00000373019 TRMUO75648 421 aaKnown RBP10.11□□□□□ -0.79
SF3A3-201ENST00000373019 BAG2O95816 211 aa10.11□□□□□ -0.79
SF3A3-201ENST00000373019 GCAP28676 217 aa10.11□□□□□ -0.79
SF3A3-201ENST00000373019 CLCN2P51788 898 aa10.11□□□□□ -0.79
SF3A3-201ENST00000373019 MARSP56192 900 aaKnown RBP10.11□□□□□ -0.79
SF3A3-201ENST00000373019 FKBP3Q00688 224 aaKnown RBP10.11□□□□□ -0.79
SF3A3-201ENST00000373019 PPIDQ08752 370 aaKnown RBP10.11□□□□□ -0.79
SF3A3-201ENST00000373019 ASPHQ12797 758 aa10.11□□□□□ -0.79
SF3A3-201ENST00000373019 PATL1Q86TB9 770 aaKnown RBP10.11□□□□□ -0.79
SF3A3-201ENST00000373019 DNAJC10Q8IXB1 793 aa10.11□□□□□ -0.79
SF3A3-201ENST00000373019 PROM2Q8N271 834 aa10.11□□□□□ -0.79
SF3A3-201ENST00000373019 TTLL11Q8NHH1 800 aa10.11□□□□□ -0.79
SF3A3-201ENST00000373019 SLC30A5Q8TAD4 765 aa10.11□□□□□ -0.79
SF3A3-201ENST00000373019 LNX1Q8TBB1 728 aaPredicted RBP10.11□□□□□ -0.79
SF3A3-201ENST00000373019 SHKBP1Q8TBC3 707 aa10.11□□□□□ -0.79
SF3A3-201ENST00000373019 ZNF398Q8TD17 642 aa10.11□□□□□ -0.79
SF3A3-201ENST00000373019 KRT35Q92764 455 aa10.11□□□□□ -0.79
SF3A3-201ENST00000373019 SKA1Q96BD8 255 aa10.11□□□□□ -0.79
SF3A3-201ENST00000373019 KCNK13Q9HB14 408 aa10.11□□□□□ -0.79
SF3A3-201ENST00000373019 COG5Q9UP83 839 aa10.11□□□□□ -0.79
SF3A3-201ENST00000373019 ZMYM2Q9UBW7 1377 aa10.11□□□□□ -0.79
SF3A3-201ENST00000373019 PVALEFA0A1B0GWK0 134 aa10.11□□□□□ -0.79
SF3A3-201ENST00000373019 CA8P35219 290 aa10.11□□□□□ -0.79
SF3A3-201ENST00000373019 COILP38432 576 aaPredicted RBP10.11□□□□□ -0.79
SF3A3-201ENST00000373019 AP2B1P63010 937 aa10.11□□□□□ -0.79
SF3A3-201ENST00000373019 CAMK2BQ13554 666 aa10.11□□□□□ -0.79
SF3A3-201ENST00000373019 LPIN1Q14693 890 aa10.11□□□□□ -0.79
SF3A3-201ENST00000373019 SIX1Q15475 284 aaPredicted RBP10.11□□□□□ -0.79
SF3A3-201ENST00000373019 MAPK6Q16659 721 aa10.11□□□□□ -0.79
SF3A3-201ENST00000373019 LPCAT4Q643R3 524 aa10.11□□□□□ -0.79
SF3A3-201ENST00000373019 ELMSAN1Q6PJG2 1045 aa10.11□□□□□ -0.79
SF3A3-201ENST00000373019 PAOXQ6QHF9 649 aa10.11□□□□□ -0.79
SF3A3-201ENST00000373019 NET1Q7Z628 596 aaPredicted RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms