RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 CCDC90BQ9GZT6 254 aa16.77■□□□□ 0.28
COL17A1-202ENST00000369733 PCMTD2Q9NV79 361 aa16.77■□□□□ 0.28
COL17A1-202ENST00000369733 FEM1BQ9UK73 627 aa16.77■□□□□ 0.28
COL17A1-202ENST00000369733 AGO2Q9UKV8 859 aaKnown RBP16.77■□□□□ 0.28
COL17A1-202ENST00000369733 APOL1O14791 398 aa16.77■□□□□ 0.28
COL17A1-202ENST00000369733 PPP1R12AO14974 1030 aaPredicted RBP16.77■□□□□ 0.28
COL17A1-202ENST00000369733 KCNN4O15554 427 aa16.77■□□□□ 0.28
COL17A1-202ENST00000369733 FAM153BP0C7A2 387 aa16.77■□□□□ 0.28
COL17A1-202ENST00000369733 RARGP13631 454 aa16.77■□□□□ 0.28
COL17A1-202ENST00000369733 NTRK3Q16288 839 aa16.77■□□□□ 0.28
COL17A1-202ENST00000369733 FAM153CQ494X1 144 aa16.77■□□□□ 0.28
COL17A1-202ENST00000369733 NAF1Q96HR8 494 aaKnown RBP16.77■□□□□ 0.28
COL17A1-202ENST00000369733 PPP1R36Q96LQ0 422 aa16.77■□□□□ 0.28
COL17A1-202ENST00000369733 FAM153AQ9UHL3 310 aa16.77■□□□□ 0.28
COL17A1-202ENST00000369733 NEXMIFQ5QGS0 1516 aa16.77■□□□□ 0.28
COL17A1-202ENST00000369733 TBX3O15119 743 aa16.77■□□□□ 0.28
COL17A1-202ENST00000369733 SUPT3HO75486 399 aa16.77■□□□□ 0.28
COL17A1-202ENST00000369733 PAPOLAP51003 745 aaKnown RBP16.77■□□□□ 0.28
COL17A1-202ENST00000369733 SKOR1P84550 965 aa16.77■□□□□ 0.28
COL17A1-202ENST00000369733 MAPRE2Q15555 327 aa16.77■□□□□ 0.28
COL17A1-202ENST00000369733 ZC3H15Q8WU90 426 aaKnown RBP16.77■□□□□ 0.28
COL17A1-202ENST00000369733 ATXN7L3BQ96GX2 97 aa16.77■□□□□ 0.28
COL17A1-202ENST00000369733 MKNK1Q9BUB5 465 aa16.77■□□□□ 0.28
COL17A1-202ENST00000369733 EHD4Q9H223 541 aa16.77■□□□□ 0.28
COL17A1-202ENST00000369733 FNDC3AQ9Y2H6 1198 aaKnown RBP16.77■□□□□ 0.28
COL17A1-202ENST00000369733 F8VZ95 297 aa16.77■□□□□ 0.27
COL17A1-202ENST00000369733 EIF3DO15371 548 aaKnown RBP eCLIP16.77■□□□□ 0.27
COL17A1-202ENST00000369733 SEC24DO94855 1032 aaPredicted RBP16.77■□□□□ 0.27
COL17A1-202ENST00000369733 FSBPO95073 299 aa16.77■□□□□ 0.27
COL17A1-202ENST00000369733 DSG1Q02413 1049 aa16.77■□□□□ 0.27
COL17A1-202ENST00000369733 RWDD4Q6NW29 188 aaKnown RBP16.77■□□□□ 0.27
COL17A1-202ENST00000369733 STX18Q9P2W9 335 aaKnown RBP16.77■□□□□ 0.27
COL17A1-202ENST00000369733 ADCY3O60266 1144 aa16.76■□□□□ 0.27
COL17A1-202ENST00000369733 PMS1P54277 932 aaKnown RBP16.76■□□□□ 0.27
COL17A1-202ENST00000369733 OVGP1Q12889 678 aa16.76■□□□□ 0.27
COL17A1-202ENST00000369733 CYLC2Q14093 348 aaPredicted RBP16.76■□□□□ 0.27
COL17A1-202ENST00000369733 KPNB1Q14974 876 aaKnown RBP16.76■□□□□ 0.27
COL17A1-202ENST00000369733 BTNL9Q6UXG8 535 aa16.76■□□□□ 0.27
COL17A1-202ENST00000369733 NLRP9Q7RTR0 991 aa16.76■□□□□ 0.27
COL17A1-202ENST00000369733 BFARQ9NZS9 450 aa16.76■□□□□ 0.27
COL17A1-202ENST00000369733 SYF2O95926 243 aaKnown RBP16.76■□□□□ 0.27
COL17A1-202ENST00000369733 GEMIN4P57678 1058 aaKnown RBP16.76■□□□□ 0.27
COL17A1-202ENST00000369733 FBXO25Q8TCJ0 367 aa16.76■□□□□ 0.27
COL17A1-202ENST00000369733 MTMR8Q96EF0 704 aa16.76■□□□□ 0.27
COL17A1-202ENST00000369733 ZNF408Q9H9D4 720 aa16.76■□□□□ 0.27
COL17A1-202ENST00000369733 RAVER2Q9HCJ3 691 aaKnown RBP16.76■□□□□ 0.27
COL17A1-202ENST00000369733 GRM1Q13255 1194 aa16.76■□□□□ 0.27
COL17A1-202ENST00000369733 ZNF568Q3ZCX4 644 aa16.76■□□□□ 0.27
COL17A1-202ENST00000369733 CEP55Q53EZ4 464 aa16.76■□□□□ 0.27
COL17A1-202ENST00000369733 ZBTB41Q5SVQ8 909 aa16.76■□□□□ 0.27
COL17A1-202ENST00000369733 SWSAP1Q6NVH7 229 aa16.76■□□□□ 0.27
COL17A1-202ENST00000369733 POTEAQ6S8J7 498 aa16.76■□□□□ 0.27
COL17A1-202ENST00000369733 MAN1A2O60476 641 aa16.76■□□□□ 0.27
COL17A1-202ENST00000369733 WEE2P0C1S8 567 aa16.76■□□□□ 0.27
COL17A1-202ENST00000369733 NPEPPSP55786 919 aa16.76■□□□□ 0.27
COL17A1-202ENST00000369733 HDAC4P56524 1084 aa16.76■□□□□ 0.27
COL17A1-202ENST00000369733 CCDC92Q53HC0 331 aaPredicted RBP16.76■□□□□ 0.27
COL17A1-202ENST00000369733 ARHGEF26Q96DR7 871 aa16.76■□□□□ 0.27
COL17A1-202ENST00000369733 DHX35Q9H5Z1 703 aaKnown RBP16.76■□□□□ 0.27
COL17A1-202ENST00000369733 SKAP2O75563 359 aaPredicted RBP16.76■□□□□ 0.27
COL17A1-202ENST00000369733 YWHABP31946 246 aaKnown RBP16.76■□□□□ 0.27
COL17A1-202ENST00000369733 SNRNP35Q16560 246 aaKnown RBP16.76■□□□□ 0.27
COL17A1-202ENST00000369733 SULF1Q8IWU6 871 aa16.76■□□□□ 0.27
COL17A1-202ENST00000369733 TTC8Q8TAM2 541 aa16.76■□□□□ 0.27
COL17A1-202ENST00000369733 ZBTB18Q99592 522 aa16.76■□□□□ 0.27
COL17A1-202ENST00000369733 MAD2L2Q9UI95 211 aa16.76■□□□□ 0.27
COL17A1-202ENST00000369733 NEMP1O14524 444 aa16.75■□□□□ 0.27
COL17A1-202ENST00000369733 RALAP11233 206 aa16.75■□□□□ 0.27
COL17A1-202ENST00000369733 KRT4P19013 534 aa16.75■□□□□ 0.27
COL17A1-202ENST00000369733 IL10P22301 178 aa16.75■□□□□ 0.27
COL17A1-202ENST00000369733 EME1Q96AY2 570 aa16.75■□□□□ 0.27
COL17A1-202ENST00000369733 MCEEQ96PE7 176 aa16.75■□□□□ 0.27
COL17A1-202ENST00000369733 RAB6BQ9NRW1 208 aa16.75■□□□□ 0.27
COL17A1-202ENST00000369733 APRTP07741 180 aa16.75■□□□□ 0.27
COL17A1-202ENST00000369733 ZNF507Q8TCN5 953 aa16.75■□□□□ 0.27
COL17A1-202ENST00000369733 PBXIP1Q96AQ6 731 aa16.75■□□□□ 0.27
COL17A1-202ENST00000369733 CMTM5Q96DZ9 223 aa16.75■□□□□ 0.27
COL17A1-202ENST00000369733 HEY2Q9UBP5 337 aa16.75■□□□□ 0.27
COL17A1-202ENST00000369733 AURKCQ9UQB9 309 aa16.75■□□□□ 0.27
COL17A1-202ENST00000369733 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.75■□□□□ 0.27
COL17A1-202ENST00000369733 TSEN2Q8NCE0 465 aaKnown RBP16.75■□□□□ 0.27
COL17A1-202ENST00000369733 SCHIP1Q9P0W5 487 aaPredicted RBP16.75■□□□□ 0.27
COL17A1-202ENST00000369733 SPATA31A3Q5VYP0 1347 aa16.75■□□□□ 0.27
COL17A1-202ENST00000369733 COL3A1P02461 1466 aaPredicted RBP16.75■□□□□ 0.27
COL17A1-202ENST00000369733 ENO3P13929 434 aaPredicted RBP16.75■□□□□ 0.27
COL17A1-202ENST00000369733 FASTKD1Q53R41 847 aaKnown RBP16.75■□□□□ 0.27
COL17A1-202ENST00000369733 GALNT4Q8N4A0 578 aa16.75■□□□□ 0.27
COL17A1-202ENST00000369733 E2F7Q96AV8 911 aa16.75■□□□□ 0.27
COL17A1-202ENST00000369733 CCDC134Q9H6E4 229 aa16.75■□□□□ 0.27
COL17A1-202ENST00000369733 RXFP1Q9HBX9 757 aa16.75■□□□□ 0.27
COL17A1-202ENST00000369733 GNAT1P11488 350 aa16.74■□□□□ 0.27
COL17A1-202ENST00000369733 ZNF844Q08AG5 666 aa16.74■□□□□ 0.27
COL17A1-202ENST00000369733 FAM47CQ5HY64 1035 aa16.74■□□□□ 0.27
COL17A1-202ENST00000369733 C16orf89Q6UX73 402 aa16.74■□□□□ 0.27
COL17A1-202ENST00000369733 FBXL16Q8N461 479 aa16.74■□□□□ 0.27
COL17A1-202ENST00000369733 FSD1LQ9BXM9 530 aa16.74■□□□□ 0.27
COL17A1-202ENST00000369733 GDF3Q9NR23 364 aa16.74■□□□□ 0.27
COL17A1-202ENST00000369733 PAIP2BQ9ULR5 123 aaKnown RBP16.74■□□□□ 0.27
COL17A1-202ENST00000369733 SNRPAP09012 282 aaKnown RBP16.74■□□□□ 0.27
COL17A1-202ENST00000369733 RASA1P20936 1047 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms