RNA–Protein interactions for RNA: ENST00000368295.8

ECHDC1-205, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-205ENST00000368295 CTR9Q6PD62 1173 aa3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 LRSAM1Q6UWE0 723 aa3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 MILR1Q7Z6M3 343 aa3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 APOBEC3FQ8IUX4 373 aaKnown RBP3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 FBXL6Q8N531 539 aa3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 FAM169BQ8N8A8 192 aa3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 PARD3BQ8TEW8 1205 aa3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 SNX21Q969T3 373 aa3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 JAKMIP2Q96AA8 810 aa3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 AIFM3Q96NN9 605 aa3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 CRBNQ96SW2 442 aa3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 RMDN3Q96TC7 470 aa3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 FAM83CQ9BQN1 747 aa3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 SLC26A6Q9BXS9 759 aa3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 SLC28A3Q9HAS3 691 aa3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 CHCHD3Q9NX63 227 aaKnown RBP3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 NSMCE4AQ9NXX6 385 aa3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 RRN3Q9NYV6 651 aa3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 NFKBIL1Q9UBC1 381 aaPredicted RBP3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 BLOC1S6Q9UL45 172 aa3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 AGTPBP1Q9UPW5 1226 aa3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 GPR52Q9Y2T5 361 aa3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 GIT1Q9Y2X7 761 aa3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 POLR3KQ9Y2Y1 108 aaPredicted RBP3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 MYO9AB2RTY4 2548 aa3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 H3BQ06 376 aaPredicted RBP3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 PLOD2O00469 737 aa3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 GSC2O15499 205 aa3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 KCNQ3O43525 872 aa3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 B3GALNT1O75752 331 aa3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 SNUPNO95149 360 aaKnown RBP3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 GJB6O95452 261 aa3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 CD4P01730 458 aa3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 KRT1P04264 644 aa3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 SFTPCP11686 197 aa3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 VCAM1P19320 739 aa3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 MUTP22033 750 aa3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 AVPR2P30518 371 aa3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 STIP1P31948 543 aaKnown RBP3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 MCM4P33991 863 aa3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 PDE6CP51160 858 aa3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 HSD17B7P56937 341 aa3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 FPGSQ05932 587 aa3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 ZP2Q05996 745 aa3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 STRN3Q13033 797 aa3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 MRPL28Q13084 256 aaKnown RBP3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 TRIM14Q14142 442 aa3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 WTAPQ15007 396 aa3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 TAF7Q15545 349 aaPredicted RBP3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 MFSD4BQ5TF39 518 aa3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 IRGCQ6NXR0 463 aa3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 LRRTM3Q86VH5 581 aa3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 HID1Q8IV36 788 aa3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 SLC41A1Q8IVJ1 513 aa3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 RNF168Q8IYW5 571 aaPredicted RBP3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 REXO1Q8N1G1 1221 aaKnown RBP3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 NGEFQ8N5V2 710 aa3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 CNTD1Q8N815 330 aa3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 GABPB2Q8TAK5 448 aaPredicted RBP3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 BRSK1Q8TDC3 778 aa3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 FERMT2Q96AC1 680 aa3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 UROC1Q96N76 676 aa3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 PRRX2Q99811 253 aa3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 TREX2Q9BQ50 279 aaPredicted RBP3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 ADPGKQ9BRR6 497 aa3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 NAA15Q9BXJ9 866 aaKnown RBP3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 MYLK2Q9H1R3 596 aa3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 RPAP3Q9H6T3 665 aaPredicted RBP3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 C7orf69Q9H7B7 122 aa3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 UBE2ZQ9H832 354 aaPredicted RBP3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 BRMS1Q9HCU9 246 aa3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 C1orf112Q9NSG2 853 aa3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 TRMT1Q9NXH9 659 aaKnown RBP3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 C6orf203Q9P0P8 240 aaPredicted RBP3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 CGNQ9P2M7 1197 aaKnown RBP3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 STOML1Q9UBI4 398 aa3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 GIMAP2Q9UG22 337 aa3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 MSRAQ9UJ68 235 aa3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 ZNF112Q9UJU3 913 aa3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 JAG2Q9Y219 1238 aa3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 FRYLO94915 3013 aa3.9□□□□□ -1.78
ECHDC1-205ENST00000368295 M0R3H8 397 aa3.9□□□□□ -1.79
ECHDC1-205ENST00000368295 MASP2O00187 686 aa3.9□□□□□ -1.79
ECHDC1-205ENST00000368295 FYB1O15117 783 aa3.9□□□□□ -1.79
ECHDC1-205ENST00000368295 IPO7O95373 1038 aaKnown RBP3.9□□□□□ -1.79
ECHDC1-205ENST00000368295 NFICP08651 508 aa3.9□□□□□ -1.79
ECHDC1-205ENST00000368295 FAM153BP0C7A2 387 aa3.9□□□□□ -1.79
ECHDC1-205ENST00000368295 IMPDH2P12268 514 aa3.9□□□□□ -1.79
ECHDC1-205ENST00000368295 KRT10P13645 584 aa3.9□□□□□ -1.79
ECHDC1-205ENST00000368295 KRT13P13646 458 aa3.9□□□□□ -1.79
ECHDC1-205ENST00000368295 P4HA1P13674 534 aa3.9□□□□□ -1.79
ECHDC1-205ENST00000368295 CAPN2P17655 700 aa3.9□□□□□ -1.79
ECHDC1-205ENST00000368295 PLCG1P19174 1290 aa3.9□□□□□ -1.79
ECHDC1-205ENST00000368295 LPOP22079 712 aaPredicted RBP3.9□□□□□ -1.79
ECHDC1-205ENST00000368295 CCNCP24863 283 aa3.9□□□□□ -1.79
ECHDC1-205ENST00000368295 ELF1P32519 619 aa3.9□□□□□ -1.79
ECHDC1-205ENST00000368295 NTF4P34130 210 aa3.9□□□□□ -1.79
ECHDC1-205ENST00000368295 HSPA4P34932 840 aa3.9□□□□□ -1.79
ECHDC1-205ENST00000368295 STAT1P42224 750 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms