RNA–Protein interactions for RNA: ENST00000368069.7

COPA-202, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene COPA, Length 4,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-202ENST00000368069 ARMCX2Q7L311 632 aa12.35□□□□□ -0.43
COPA-202ENST00000368069 ATG4AQ8WYN0 398 aa12.35□□□□□ -0.43
COPA-202ENST00000368069 SLC13A1Q9BZW2 595 aa12.35□□□□□ -0.43
COPA-202ENST00000368069 SLC40A1Q9NP59 571 aa12.35□□□□□ -0.43
COPA-202ENST00000368069 SMG5Q9UPR3 1016 aaKnown RBP12.35□□□□□ -0.43
COPA-202ENST00000368069 AFG3L2Q9Y4W6 797 aa12.35□□□□□ -0.43
COPA-202ENST00000368069 FAM47DPA6NHR8 397 aa12.35□□□□□ -0.43
COPA-202ENST00000368069 COL23A1Q86Y22 540 aaPredicted RBP12.35□□□□□ -0.43
COPA-202ENST00000368069 LRRC34Q8IZ02 419 aa12.35□□□□□ -0.43
COPA-202ENST00000368069 TSEN2Q8NCE0 465 aaKnown RBP12.35□□□□□ -0.43
COPA-202ENST00000368069 ATP8B4Q8TF62 1192 aa12.35□□□□□ -0.43
COPA-202ENST00000368069 SLC35C1Q96A29 364 aa12.35□□□□□ -0.43
COPA-202ENST00000368069 SPATA33Q96N06 139 aa12.35□□□□□ -0.43
COPA-202ENST00000368069 FIS1Q9Y3D6 152 aa12.35□□□□□ -0.43
COPA-202ENST00000368069 EXTL3O43909 919 aa12.35□□□□□ -0.43
COPA-202ENST00000368069 CAND2O75155 1236 aa12.35□□□□□ -0.43
COPA-202ENST00000368069 HNRNPH1P31943 449 aaKnown RBP12.35□□□□□ -0.43
COPA-202ENST00000368069 LRRC55Q6ZSA7 311 aa12.35□□□□□ -0.43
COPA-202ENST00000368069 DCLK2Q8N568 766 aa12.35□□□□□ -0.43
COPA-202ENST00000368069 NCAPGQ9BPX3 1015 aa12.35□□□□□ -0.43
COPA-202ENST00000368069 POLRMTO00411 1230 aaKnown RBP12.35□□□□□ -0.43
COPA-202ENST00000368069 ICAM1P05362 532 aa12.35□□□□□ -0.43
COPA-202ENST00000368069 C2CD6Q53TS8 623 aa12.35□□□□□ -0.43
COPA-202ENST00000368069 HIPK4Q8NE63 616 aa12.35□□□□□ -0.43
COPA-202ENST00000368069 MCUQ8NE86 351 aa12.35□□□□□ -0.43
COPA-202ENST00000368069 SGSM3Q96HU1 749 aa12.35□□□□□ -0.43
COPA-202ENST00000368069 TRIM4Q9C037 500 aa12.35□□□□□ -0.43
COPA-202ENST00000368069 PPP1R9AQ9ULJ8 1098 aa12.35□□□□□ -0.43
COPA-202ENST00000368069 REXO2Q9Y3B8 237 aaKnown RBP12.35□□□□□ -0.43
COPA-202ENST00000368069 PIK3R2O00459 728 aa12.34□□□□□ -0.43
COPA-202ENST00000368069 HSPA4LO95757 839 aa12.34□□□□□ -0.43
COPA-202ENST00000368069 MUTP22033 750 aa12.34□□□□□ -0.43
COPA-202ENST00000368069 CENPCQ03188 943 aa12.34□□□□□ -0.43
COPA-202ENST00000368069 ZNF677Q86XU0 584 aa12.34□□□□□ -0.43
COPA-202ENST00000368069 KLHL8Q9P2G9 620 aaPredicted RBP12.34□□□□□ -0.43
COPA-202ENST00000368069 STOML1Q9UBI4 398 aa12.34□□□□□ -0.43
COPA-202ENST00000368069 CYP11B1P15538 503 aa12.34□□□□□ -0.43
COPA-202ENST00000368069 SMAD1Q15797 465 aaKnown RBP12.34□□□□□ -0.43
COPA-202ENST00000368069 ATG4CQ96DT6 458 aa12.34□□□□□ -0.43
COPA-202ENST00000368069 FAM163AQ96GL9 167 aaPredicted RBP12.34□□□□□ -0.43
COPA-202ENST00000368069 FAM167BQ9BTA0 163 aa12.34□□□□□ -0.43
COPA-202ENST00000368069 TARS2Q9BW92 718 aaKnown RBP12.34□□□□□ -0.43
COPA-202ENST00000368069 VPS11Q9H270 941 aa12.34□□□□□ -0.43
COPA-202ENST00000368069 DDX3XO00571 662 aaKnown RBP eCLIP12.34□□□□□ -0.432e-14■■□□□ 13.7
COPA-202ENST00000368069 MTM1Q13496 603 aa12.34□□□□□ -0.43
COPA-202ENST00000368069 THOC5Q13769 683 aaKnown RBP12.34□□□□□ -0.43
COPA-202ENST00000368069 HEATR6Q6AI08 1181 aaKnown RBP12.34□□□□□ -0.43
COPA-202ENST00000368069 IRF2BP1Q8IU81 584 aa12.34□□□□□ -0.43
COPA-202ENST00000368069 APOBEC3FQ8IUX4 373 aaKnown RBP12.34□□□□□ -0.43
COPA-202ENST00000368069 NUDCD3Q8IVD9 361 aa12.34□□□□□ -0.43
COPA-202ENST00000368069 HDAC11Q96DB2 347 aa12.34□□□□□ -0.43
COPA-202ENST00000368069 NUDCD1Q96RS6 583 aa12.34□□□□□ -0.43
COPA-202ENST00000368069 CCDC68Q9H2F9 335 aa12.34□□□□□ -0.43
COPA-202ENST00000368069 DHX35Q9H5Z1 703 aaKnown RBP12.34□□□□□ -0.43
COPA-202ENST00000368069 PSMC3IPQ9P2W1 217 aaPredicted RBP12.34□□□□□ -0.43
COPA-202ENST00000368069 CFLARO15519 480 aa12.34□□□□□ -0.43
COPA-202ENST00000368069 RAD23BP54727 409 aa12.34□□□□□ -0.43
COPA-202ENST00000368069 MAP7Q14244 749 aa12.34□□□□□ -0.43
COPA-202ENST00000368069 PIGHQ14442 188 aaPredicted RBP12.34□□□□□ -0.43
COPA-202ENST00000368069 STYK1Q6J9G0 422 aa12.34□□□□□ -0.43
COPA-202ENST00000368069 C4orf32Q8N8J7 132 aa12.34□□□□□ -0.43
COPA-202ENST00000368069 POP1Q99575 1024 aaKnown RBP12.34□□□□□ -0.43
COPA-202ENST00000368069 HSD3B7Q9H2F3 369 aa12.34□□□□□ -0.43
COPA-202ENST00000368069 IPO11Q9UI26 975 aaKnown RBP12.34□□□□□ -0.43
COPA-202ENST00000368069 APOBEC2Q9Y235 224 aaKnown RBP12.34□□□□□ -0.43
COPA-202ENST00000368069 NRXN3Q9Y4C0 1643 aa12.33□□□□□ -0.43
COPA-202ENST00000368069 FGRP09769 529 aa12.33□□□□□ -0.44
COPA-202ENST00000368069 GTF2H1P32780 548 aa12.33□□□□□ -0.44
COPA-202ENST00000368069 SLC12A3P55017 1021 aa12.33□□□□□ -0.44
COPA-202ENST00000368069 AMPD2Q01433 879 aa12.33□□□□□ -0.44
COPA-202ENST00000368069 SEPT6Q14141 434 aa12.33□□□□□ -0.44
COPA-202ENST00000368069 KIF2BQ8N4N8 673 aa12.33□□□□□ -0.44
COPA-202ENST00000368069 HAS1Q92839 578 aa12.33□□□□□ -0.44
COPA-202ENST00000368069 FOXP3Q9BZS1 431 aa12.33□□□□□ -0.44
COPA-202ENST00000368069 GDF3Q9NR23 364 aa12.33□□□□□ -0.44
COPA-202ENST00000368069 MID2Q9UJV3 735 aa12.33□□□□□ -0.44
COPA-202ENST00000368069 EIF4E1BA6NMX2 242 aaKnown RBP12.33□□□□□ -0.44
COPA-202ENST00000368069 RHBDL3P58872 404 aa12.33□□□□□ -0.44
COPA-202ENST00000368069 SGSM1Q2NKQ1 1148 aa12.33□□□□□ -0.44
COPA-202ENST00000368069 CDKL3Q8IVW4 592 aaPredicted RBP12.33□□□□□ -0.44
COPA-202ENST00000368069 FEZF2Q8TBJ5 459 aa12.33□□□□□ -0.44
COPA-202ENST00000368069 AP5M1Q9H0R1 490 aa12.33□□□□□ -0.44
COPA-202ENST00000368069 AFDNP55196 1824 aaKnown RBP12.33□□□□□ -0.44
COPA-202ENST00000368069 RGL2O15211 777 aa12.33□□□□□ -0.44
COPA-202ENST00000368069 PDHA1P08559 390 aa12.33□□□□□ -0.44
COPA-202ENST00000368069 MYBL2P10244 700 aa12.33□□□□□ -0.44
COPA-202ENST00000368069 GZMAP12544 262 aa12.33□□□□□ -0.44
COPA-202ENST00000368069 PTENP60484 403 aa12.33□□□□□ -0.44
COPA-202ENST00000368069 TTLL4Q14679 1199 aa12.33□□□□□ -0.44
COPA-202ENST00000368069 GPAT2Q6NUI2 795 aa12.33□□□□□ -0.44
COPA-202ENST00000368069 SLC47A2Q86VL8 602 aa12.33□□□□□ -0.44
COPA-202ENST00000368069 MICALL2Q8IY33 904 aa12.33□□□□□ -0.44
COPA-202ENST00000368069 ZNF280CQ8ND82 737 aa12.33□□□□□ -0.44
COPA-202ENST00000368069 ERP27Q96DN0 273 aa12.33□□□□□ -0.44
COPA-202ENST00000368069 NPHS2Q9NP85 383 aa12.33□□□□□ -0.44
COPA-202ENST00000368069 TOPORSQ9NS56 1045 aaPredicted RBP12.33□□□□□ -0.44
COPA-202ENST00000368069 SPATS2LQ9NUQ6 558 aaKnown RBP12.33□□□□□ -0.44
COPA-202ENST00000368069 TMX2Q9Y320 296 aa12.33□□□□□ -0.44
COPA-202ENST00000368069 USH1CQ9Y6N9 552 aa12.33□□□□□ -0.44
COPA-202ENST00000368069 GOLGA8QA0A0J9YX86 632 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 107.3 ms