RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 MRGPRX4Q96LA9 322 aa6.97□□□□□ -1.29
RNU4-39P-201ENST00000362455 STRBPQ96SI9 672 aaKnown RBP6.97□□□□□ -1.29
RNU4-39P-201ENST00000362455 LDAHQ9H6V9 325 aa6.97□□□□□ -1.29
RNU4-39P-201ENST00000362455 ADGRL3Q9HAR2 1447 aa6.97□□□□□ -1.29
RNU4-39P-201ENST00000362455 BARX1Q9HBU1 254 aaPredicted RBP6.97□□□□□ -1.29
RNU4-39P-201ENST00000362455 ADAM29Q9UKF5 820 aa6.97□□□□□ -1.29
RNU4-39P-201ENST00000362455 PHTF1Q9UMS5 762 aa6.97□□□□□ -1.29
RNU4-39P-201ENST00000362455 POLHQ9Y253 713 aa6.97□□□□□ -1.29
RNU4-39P-201ENST00000362455 C1orf167Q5SNV9 1468 aa6.97□□□□□ -1.29
RNU4-39P-201ENST00000362455 TCAF2A6NFQ2 919 aa6.96□□□□□ -1.3
RNU4-39P-201ENST00000362455 GOLIM4O00461 696 aa6.96□□□□□ -1.3
RNU4-39P-201ENST00000362455 FFAR3O14843 346 aa6.96□□□□□ -1.3
RNU4-39P-201ENST00000362455 PQBP1O60828 265 aaKnown RBP6.96□□□□□ -1.3
RNU4-39P-201ENST00000362455 ITGA10O75578 1167 aa6.96□□□□□ -1.3
RNU4-39P-201ENST00000362455 TOX4O94842 621 aa6.96□□□□□ -1.3
RNU4-39P-201ENST00000362455 LDHAP00338 332 aaKnown RBP6.96□□□□□ -1.3
RNU4-39P-201ENST00000362455 AMY1AP04745 511 aa6.96□□□□□ -1.3
RNU4-39P-201ENST00000362455 MYL3P08590 195 aa6.96□□□□□ -1.3
RNU4-39P-201ENST00000362455 CRHR1P34998 444 aa6.96□□□□□ -1.3
RNU4-39P-201ENST00000362455 CACNB3P54284 484 aa6.96□□□□□ -1.3
RNU4-39P-201ENST00000362455 RAB1AP62820 205 aa6.96□□□□□ -1.3
RNU4-39P-201ENST00000362455 KHDC1Q4VXA5 237 aaKnown RBP6.96□□□□□ -1.3
RNU4-39P-201ENST00000362455 C11orf96Q7Z7L8 435 aa6.96□□□□□ -1.3
RNU4-39P-201ENST00000362455 EXOC8Q8IYI6 725 aa6.96□□□□□ -1.3
RNU4-39P-201ENST00000362455 CARFQ8N187 725 aa6.96□□□□□ -1.3
RNU4-39P-201ENST00000362455 KLHL36Q8N4N3 616 aa6.96□□□□□ -1.3
RNU4-39P-201ENST00000362455 ZGPATQ8N5A5 531 aaKnown RBP6.96□□□□□ -1.3
RNU4-39P-201ENST00000362455 PARD3BQ8TEW8 1205 aa6.96□□□□□ -1.3
RNU4-39P-201ENST00000362455 CYFIP2Q96F07 1278 aa6.96□□□□□ -1.3
RNU4-39P-201ENST00000362455 FAM84AQ96KN4 292 aa6.96□□□□□ -1.3
RNU4-39P-201ENST00000362455 VRK1Q99986 396 aaPredicted RBP6.96□□□□□ -1.3
RNU4-39P-201ENST00000362455 NAA15Q9BXJ9 866 aaKnown RBP6.96□□□□□ -1.3
RNU4-39P-201ENST00000362455 ARMT1Q9H993 441 aa6.96□□□□□ -1.3
RNU4-39P-201ENST00000362455 LANCL2Q9NS86 450 aa6.96□□□□□ -1.3
RNU4-39P-201ENST00000362455 SMG5Q9UPR3 1016 aaKnown RBP6.96□□□□□ -1.3
RNU4-39P-201ENST00000362455 ZDHHC9Q9Y397 364 aa6.96□□□□□ -1.3
RNU4-39P-201ENST00000362455 PCDHA3Q9Y5H8 950 aa6.96□□□□□ -1.3
RNU4-39P-201ENST00000362455 SHPRHQ149N8 1683 aa6.96□□□□□ -1.3
RNU4-39P-201ENST00000362455 MYBBP1AQ9BQG0 1328 aaKnown RBP6.96□□□□□ -1.3
RNU4-39P-201ENST00000362455 UNC13BO14795 1591 aa6.95□□□□□ -1.3
RNU4-39P-201ENST00000362455 NRXN3Q9Y4C0 1643 aa6.95□□□□□ -1.3
RNU4-39P-201ENST00000362455 A0A088AWK7 358 aa6.95□□□□□ -1.3
RNU4-39P-201ENST00000362455 RFXAPO00287 272 aa6.95□□□□□ -1.3
RNU4-39P-201ENST00000362455 MTSS1O43312 755 aa6.95□□□□□ -1.3
RNU4-39P-201ENST00000362455 GASTP01350 101 aa6.95□□□□□ -1.3
RNU4-39P-201ENST00000362455 PEX2P28328 305 aa6.95□□□□□ -1.3
RNU4-39P-201ENST00000362455 ZNF280AP59817 542 aaPredicted RBP6.95□□□□□ -1.3
RNU4-39P-201ENST00000362455 BPIFB4P59827 614 aa6.95□□□□□ -1.3
RNU4-39P-201ENST00000362455 ATP2C1P98194 919 aaPredicted RBP6.95□□□□□ -1.3
RNU4-39P-201ENST00000362455 RAB39AQ14964 217 aa6.95□□□□□ -1.3
RNU4-39P-201ENST00000362455 ACAP1Q15027 740 aa6.95□□□□□ -1.3
RNU4-39P-201ENST00000362455 TBR1Q16650 682 aa6.95□□□□□ -1.3
RNU4-39P-201ENST00000362455 ZMAT1Q5H9K5 638 aa6.95□□□□□ -1.3
RNU4-39P-201ENST00000362455 FAM26FQ5R3K3 315 aa6.95□□□□□ -1.3
RNU4-39P-201ENST00000362455 GORABQ5T7V8 394 aa6.95□□□□□ -1.3
RNU4-39P-201ENST00000362455 USP30Q70CQ3 517 aa6.95□□□□□ -1.3
RNU4-39P-201ENST00000362455 MAEAQ7L5Y9 396 aa6.95□□□□□ -1.3
RNU4-39P-201ENST00000362455 HEATR3Q7Z4Q2 680 aa6.95□□□□□ -1.3
RNU4-39P-201ENST00000362455 TRMT2AQ8IZ69 625 aaKnown RBP6.95□□□□□ -1.3
RNU4-39P-201ENST00000362455 REPS2Q8NFH8 660 aa6.95□□□□□ -1.3
RNU4-39P-201ENST00000362455 FBXO18Q8NFZ0 1043 aa6.95□□□□□ -1.3
RNU4-39P-201ENST00000362455 OR14K1Q8NGZ2 314 aa6.95□□□□□ -1.3
RNU4-39P-201ENST00000362455 IFI44Q8TCB0 444 aa6.95□□□□□ -1.3
RNU4-39P-201ENST00000362455 ADAMTS17Q8TE56 1095 aa6.95□□□□□ -1.3
RNU4-39P-201ENST00000362455 LRTOMTQ8WZ04 291 aa6.95□□□□□ -1.3
RNU4-39P-201ENST00000362455 DACT3Q96B18 629 aaPredicted RBP6.95□□□□□ -1.3
RNU4-39P-201ENST00000362455 NT5C1BQ96P26 610 aa6.95□□□□□ -1.3
RNU4-39P-201ENST00000362455 ELAC2Q9BQ52 826 aaKnown RBP6.95□□□□□ -1.3
RNU4-39P-201ENST00000362455 APOL5Q9BWW9 433 aa6.95□□□□□ -1.3
RNU4-39P-201ENST00000362455 SENP6Q9GZR1 1112 aaPredicted RBP6.95□□□□□ -1.3
RNU4-39P-201ENST00000362455 MYH16Q9H6N6 1097 aa6.95□□□□□ -1.3
RNU4-39P-201ENST00000362455 CD320Q9NPF0 282 aa6.95□□□□□ -1.3
RNU4-39P-201ENST00000362455 LMBRD1Q9NUN5 540 aa6.95□□□□□ -1.3
RNU4-39P-201ENST00000362455 CALCOCO1Q9P1Z2 691 aa6.95□□□□□ -1.3
RNU4-39P-201ENST00000362455 AJAP1Q9UKB5 411 aaPredicted RBP6.95□□□□□ -1.3
RNU4-39P-201ENST00000362455 SETBP1Q9Y6X0 1596 aa6.95□□□□□ -1.3
RNU4-39P-201ENST00000362455 ATRNO75882 1429 aa6.94□□□□□ -1.3
RNU4-39P-201ENST00000362455 BCL9LQ86UU0 1499 aa6.94□□□□□ -1.3
RNU4-39P-201ENST00000362455 XRN1Q8IZH2 1706 aaKnown RBP6.94□□□□□ -1.3
RNU4-39P-201ENST00000362455 CFAP69A5D8W1 941 aa6.94□□□□□ -1.3
RNU4-39P-201ENST00000362455 C9orf118A6NHY6 69 aa6.94□□□□□ -1.3
RNU4-39P-201ENST00000362455 H3BUI4 141 aa6.94□□□□□ -1.3
RNU4-39P-201ENST00000362455 GPR32O75388 356 aa6.94□□□□□ -1.3
RNU4-39P-201ENST00000362455 C1QTNF9P0C862 333 aa6.94□□□□□ -1.3
RNU4-39P-201ENST00000362455 VSIG10L2P0DP72 767 aa6.94□□□□□ -1.3
RNU4-39P-201ENST00000362455 GYPEP15421 78 aa6.94□□□□□ -1.3
RNU4-39P-201ENST00000362455 DDCP20711 480 aa6.94□□□□□ -1.3
RNU4-39P-201ENST00000362455 GUCY1A2P33402 732 aa6.94□□□□□ -1.3
RNU4-39P-201ENST00000362455 NKX6-1P78426 367 aaPredicted RBP6.94□□□□□ -1.3
RNU4-39P-201ENST00000362455 GPSM2P81274 684 aa6.94□□□□□ -1.3
RNU4-39P-201ENST00000362455 TLE1Q04724 770 aa6.94□□□□□ -1.3
RNU4-39P-201ENST00000362455 DUSP2Q05923 314 aa6.94□□□□□ -1.3
RNU4-39P-201ENST00000362455 ZNF385BQ569K4 471 aa6.94□□□□□ -1.3
RNU4-39P-201ENST00000362455 KRT40Q6A162 431 aa6.94□□□□□ -1.3
RNU4-39P-201ENST00000362455 GADL1Q6ZQY3 521 aa6.94□□□□□ -1.3
RNU4-39P-201ENST00000362455 CERS3Q8IU89 383 aa6.94□□□□□ -1.3
RNU4-39P-201ENST00000362455 ANKRD53Q8N9V6 530 aa6.94□□□□□ -1.3
RNU4-39P-201ENST00000362455 MBD6Q96DN6 1003 aa6.94□□□□□ -1.3
RNU4-39P-201ENST00000362455 SLC35A4Q96G79 324 aa6.94□□□□□ -1.3
RNU4-39P-201ENST00000362455 PPP1R16BQ96T49 567 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms