RNA–Protein interactions for RNA: ENST00000361813.5

SMG5-201, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG5, Length 4,559 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-201ENST00000361813 USP21Q9UK80 565 aa18.84■□□□□ 0.61
SMG5-201ENST00000361813 STRIP2Q9ULQ0 834 aa18.84■□□□□ 0.61
SMG5-201ENST00000361813 DNAJC8O75937 253 aaPredicted RBP18.84■□□□□ 0.61
SMG5-201ENST00000361813 TBXAS1P24557 533 aaPredicted RBP18.84■□□□□ 0.61
SMG5-201ENST00000361813 CDH6P55285 790 aa18.84■□□□□ 0.61
SMG5-201ENST00000361813 ITKQ08881 620 aa18.84■□□□□ 0.61
SMG5-201ENST00000361813 ZNF699Q32M78 642 aa18.84■□□□□ 0.61
SMG5-201ENST00000361813 RIBC1Q8N443 379 aaPredicted RBP18.84■□□□□ 0.61
SMG5-201ENST00000361813 SPDYE1Q8NFV5 336 aaPredicted RBP18.84■□□□□ 0.61
SMG5-201ENST00000361813 CDHR1Q96JP9 859 aa18.84■□□□□ 0.61
SMG5-201ENST00000361813 MRPL46Q9H2W6 279 aaKnown RBP18.84■□□□□ 0.61
SMG5-201ENST00000361813 RAVER2Q9HCJ3 691 aaKnown RBP18.84■□□□□ 0.61
SMG5-201ENST00000361813 XAB2Q9HCS7 855 aaKnown RBP18.84■□□□□ 0.61
SMG5-201ENST00000361813 DDX56Q9NY93 547 aaKnown RBP18.84■□□□□ 0.61
SMG5-201ENST00000361813 GNAT1P11488 350 aa18.84■□□□□ 0.61
SMG5-201ENST00000361813 PSMC5P62195 406 aa18.84■□□□□ 0.61
SMG5-201ENST00000361813 ZNF662Q6ZS27 426 aa18.84■□□□□ 0.61
SMG5-201ENST00000361813 MREGQ8N565 214 aa18.84■□□□□ 0.61
SMG5-201ENST00000361813 PPP1R16BQ96T49 567 aa18.84■□□□□ 0.61
SMG5-201ENST00000361813 FOXP3Q9BZS1 431 aa18.84■□□□□ 0.61
SMG5-201ENST00000361813 MTO1Q9Y2Z2 717 aaKnown RBP18.84■□□□□ 0.61
SMG5-201ENST00000361813 RAD17O75943 681 aa18.83■□□□□ 0.61
SMG5-201ENST00000361813 APOEP02649 317 aa18.83■□□□□ 0.61
SMG5-201ENST00000361813 SHBGP04278 402 aa18.83■□□□□ 0.61
SMG5-201ENST00000361813 ACOT2P49753 483 aa18.83■□□□□ 0.61
SMG5-201ENST00000361813 PTK7Q13308 1070 aa18.83■□□□□ 0.61
SMG5-201ENST00000361813 SLC27A3Q5K4L6 730 aa18.83■□□□□ 0.61
SMG5-201ENST00000361813 SWSAP1Q6NVH7 229 aa18.83■□□□□ 0.61
SMG5-201ENST00000361813 PGM2Q96G03 612 aa18.83■□□□□ 0.61
SMG5-201ENST00000361813 NLRP4Q96MN2 994 aa18.83■□□□□ 0.61
SMG5-201ENST00000361813 SH3GL2Q99962 352 aa18.83■□□□□ 0.61
SMG5-201ENST00000361813 ASNSD1Q9NWL6 643 aa18.83■□□□□ 0.61
SMG5-201ENST00000361813 AGPSO00116 658 aa18.83■□□□□ 0.61
SMG5-201ENST00000361813 TNFRSF8P28908 595 aa18.83■□□□□ 0.61
SMG5-201ENST00000361813 YWHABP31946 246 aaKnown RBP18.83■□□□□ 0.61
SMG5-201ENST00000361813 ABCD1P33897 745 aa18.83■□□□□ 0.61
SMG5-201ENST00000361813 PSMC6P62333 389 aa18.83■□□□□ 0.61
SMG5-201ENST00000361813 DEUP1Q05D60 604 aa18.83■□□□□ 0.61
SMG5-201ENST00000361813 TNFAIP1Q13829 316 aa18.83■□□□□ 0.61
SMG5-201ENST00000361813 SENP7Q9BQF6 1050 aa18.83■□□□□ 0.61
SMG5-201ENST00000361813 NAALADL1Q9UQQ1 740 aa18.83■□□□□ 0.61
SMG5-201ENST00000361813 DIP2BQ9P265 1576 aa18.83■□□□□ 0.6
SMG5-201ENST00000361813 MTDHQ86UE4 582 aaKnown RBP18.83■□□□□ 0.6
SMG5-201ENST00000361813 AGAP11Q8TF27 550 aa18.83■□□□□ 0.6
SMG5-201ENST00000361813 TMEM237Q96Q45 408 aa18.83■□□□□ 0.6
SMG5-201ENST00000361813 DCLRE1BQ9H816 532 aa18.83■□□□□ 0.6
SMG5-201ENST00000361813 AGO2Q9UKV8 859 aaKnown RBP18.83■□□□□ 0.6
SMG5-201ENST00000361813 CYTH3O43739 400 aa18.83■□□□□ 0.6
SMG5-201ENST00000361813 APRTP07741 180 aa18.83■□□□□ 0.6
SMG5-201ENST00000361813 EAPPQ56P03 285 aaPredicted RBP18.83■□□□□ 0.6
SMG5-201ENST00000361813 ARID3BQ8IVW6 561 aaPredicted RBP18.83■□□□□ 0.6
SMG5-201ENST00000361813 BAP1Q92560 729 aa18.83■□□□□ 0.6
SMG5-201ENST00000361813 ACSF2Q96CM8 615 aaPredicted RBP18.83■□□□□ 0.6
SMG5-201ENST00000361813 MOV10L1Q9BXT6 1211 aaKnown RBP18.83■□□□□ 0.6
SMG5-201ENST00000361813 CYP26B1Q9NR63 512 aa18.83■□□□□ 0.6
SMG5-201ENST00000361813 CNOT7Q9UIV1 285 aaKnown RBP18.83■□□□□ 0.6
SMG5-201ENST00000361813 PCDHB2Q9Y5E7 798 aa18.83■□□□□ 0.6
SMG5-201ENST00000361813 TYK2P29597 1187 aa18.82■□□□□ 0.6
SMG5-201ENST00000361813 CASP2P42575 452 aa18.82■□□□□ 0.6
SMG5-201ENST00000361813 KRT76Q01546 638 aa18.82■□□□□ 0.6
SMG5-201ENST00000361813 MCEEQ96PE7 176 aa18.82■□□□□ 0.6
SMG5-201ENST00000361813 UPF3AQ9H1J1 476 aaKnown RBP18.82■□□□□ 0.6
SMG5-201ENST00000361813 PAPOLBQ9NRJ5 636 aaKnown RBP18.82■□□□□ 0.6
SMG5-201ENST00000361813 XPO7Q9UIA9 1087 aaKnown RBP18.82■□□□□ 0.6
SMG5-201ENST00000361813 MEGF6O75095 1541 aa18.82■□□□□ 0.6
SMG5-201ENST00000361813 TMEM131LA2VDJ0 1609 aa18.82■□□□□ 0.6
SMG5-201ENST00000361813 LOC100653049A0A140TA62 436 aa18.82■□□□□ 0.6
SMG5-201ENST00000361813 ZNF263O14978 683 aa18.82■□□□□ 0.6
SMG5-201ENST00000361813 KRT34O76011 436 aa18.82■□□□□ 0.6
SMG5-201ENST00000361813 HNRNPCP07910 306 aaKnown RBP eCLIP18.82■□□□□ 0.6
SMG5-201ENST00000361813 CYTH1Q15438 398 aa18.82■□□□□ 0.6
SMG5-201ENST00000361813 DNAL1Q4LDG9 190 aa18.82■□□□□ 0.6
SMG5-201ENST00000361813 TAF1BQ53T94 588 aaPredicted RBP18.82■□□□□ 0.6
SMG5-201ENST00000361813 MTRQ99707 1265 aa18.82■□□□□ 0.6
SMG5-201ENST00000361813 DRC3Q9H069 523 aa18.82■□□□□ 0.6
SMG5-201ENST00000361813 TRPV6Q9H1D0 765 aa18.82■□□□□ 0.6
SMG5-201ENST00000361813 RAB6BQ9NRW1 208 aa18.82■□□□□ 0.6
SMG5-201ENST00000361813 C1orf167Q5SNV9 1468 aa18.82■□□□□ 0.6
SMG5-201ENST00000361813 ARHGAP10A1A4S6 786 aa18.82■□□□□ 0.6
SMG5-201ENST00000361813 MSH4O15457 936 aa18.82■□□□□ 0.6
SMG5-201ENST00000361813 ZNF200P98182 395 aaPredicted RBP18.82■□□□□ 0.6
SMG5-201ENST00000361813 STX3Q13277 289 aa18.82■□□□□ 0.6
SMG5-201ENST00000361813 TFDP1Q14186 410 aa18.82■□□□□ 0.6
SMG5-201ENST00000361813 TXNRD3Q86VQ6 643 aa18.82■□□□□ 0.6
SMG5-201ENST00000361813 NLGN1Q8N2Q7 840 aa18.82■□□□□ 0.6
SMG5-201ENST00000361813 SDCCAG3Q96C92 435 aa18.82■□□□□ 0.6
SMG5-201ENST00000361813 ADA2Q9NZK5 511 aa18.82■□□□□ 0.6
SMG5-201ENST00000361813 WHRNQ9P202 907 aa18.82■□□□□ 0.6
SMG5-201ENST00000361813 CES2O00748 559 aa18.81■□□□□ 0.6
SMG5-201ENST00000361813 KRT3P12035 628 aa18.81■□□□□ 0.6
SMG5-201ENST00000361813 NCAPG2Q86XI2 1143 aa18.81■□□□□ 0.6
SMG5-201ENST00000361813 FAM96AQ9H5X1 160 aa18.81■□□□□ 0.6
SMG5-201ENST00000361813 METTL5Q9NRN9 209 aaKnown RBP18.81■□□□□ 0.6
SMG5-201ENST00000361813 MID2Q9UJV3 735 aa18.81■□□□□ 0.6
SMG5-201ENST00000361813 CENPCQ03188 943 aa18.81■□□□□ 0.6
SMG5-201ENST00000361813 CNGA3Q16281 694 aa18.81■□□□□ 0.6
SMG5-201ENST00000361813 ERMARDQ5T6L9 678 aa18.81■□□□□ 0.6
SMG5-201ENST00000361813 LCA5Q86VQ0 697 aa18.81■□□□□ 0.6
SMG5-201ENST00000361813 CCNYL1Q8N7R7 359 aa18.81■□□□□ 0.6
SMG5-201ENST00000361813 ATXN7L3BQ96GX2 97 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms