RNA–Protein interactions for RNA: ENST00000356887.11

GYPC-202, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPC, Length 2,067 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-202ENST00000356887 GABBR1Q9UBS5 961 aa18.85■□□□□ 0.61
GYPC-202ENST00000356887 ASIC3Q9UHC3 531 aa18.85■□□□□ 0.61
GYPC-202ENST00000356887 RRM1P23921 792 aa18.84■□□□□ 0.61
GYPC-202ENST00000356887 MKRN4PQ13434 485 aaPredicted RBP18.84■□□□□ 0.61
GYPC-202ENST00000356887 NBPF9Q3BBW0 867 aa18.84■□□□□ 0.61
GYPC-202ENST00000356887 XRRA1Q6P2D8 792 aa18.84■□□□□ 0.61
GYPC-202ENST00000356887 NLRX1Q86UT6 975 aa18.84■□□□□ 0.61
GYPC-202ENST00000356887 CPA5Q8WXQ8 436 aa18.84■□□□□ 0.61
GYPC-202ENST00000356887 ATG4AQ8WYN0 398 aa18.84■□□□□ 0.61
GYPC-202ENST00000356887 TRIM11Q96F44 468 aa18.84■□□□□ 0.61
GYPC-202ENST00000356887 FAM213AQ9BRX8 229 aa18.84■□□□□ 0.61
GYPC-202ENST00000356887 ATP2C2O75185 946 aa18.83■□□□□ 0.61
GYPC-202ENST00000356887 RTP1P59025 263 aa18.83■□□□□ 0.61
GYPC-202ENST00000356887 PTP4A2Q12974 167 aa18.83■□□□□ 0.61
GYPC-202ENST00000356887 TAS1R3Q7RTX0 852 aa18.83■□□□□ 0.61
GYPC-202ENST00000356887 VSIG10LQ86VR7 867 aa18.83■□□□□ 0.61
GYPC-202ENST00000356887 GRK7Q8WTQ7 553 aa18.83■□□□□ 0.61
GYPC-202ENST00000356887 FAM84AQ96KN4 292 aa18.83■□□□□ 0.61
GYPC-202ENST00000356887 ELAC2Q9BQ52 826 aaKnown RBP18.83■□□□□ 0.61
GYPC-202ENST00000356887 CCDC113Q9H0I3 377 aa18.83■□□□□ 0.61
GYPC-202ENST00000356887 HOMER3Q9NSC5 361 aa18.83■□□□□ 0.61
GYPC-202ENST00000356887 C1orf112Q9NSG2 853 aa18.83■□□□□ 0.61
GYPC-202ENST00000356887 PCDHB2Q9Y5E7 798 aa18.83■□□□□ 0.61
GYPC-202ENST00000356887 WNT10BO00744 389 aa18.83■□□□□ 0.6
GYPC-202ENST00000356887 HNRNPDLO14979 420 aaKnown RBP18.83■□□□□ 0.6
GYPC-202ENST00000356887 CHUKO15111 745 aa18.83■□□□□ 0.6
GYPC-202ENST00000356887 ZBED4O75132 1171 aa18.83■□□□□ 0.6
GYPC-202ENST00000356887 ACSL3O95573 720 aa18.83■□□□□ 0.6
GYPC-202ENST00000356887 TTC4O95801 387 aa18.83■□□□□ 0.6
GYPC-202ENST00000356887 CYP1A1P04798 512 aaPredicted RBP18.83■□□□□ 0.6
GYPC-202ENST00000356887 VIMP08670 466 aaKnown RBP18.83■□□□□ 0.6
GYPC-202ENST00000356887 ITGA8P53708 1063 aa18.83■□□□□ 0.6
GYPC-202ENST00000356887 CLDN10P78369 228 aa18.83■□□□□ 0.6
GYPC-202ENST00000356887 CAV1Q03135 178 aa18.83■□□□□ 0.6
GYPC-202ENST00000356887 CYB5D1Q6P9G0 228 aa18.83■□□□□ 0.6
GYPC-202ENST00000356887 ATL2Q8NHH9 583 aa18.83■□□□□ 0.6
GYPC-202ENST00000356887 GPRASP2Q96D09 838 aa18.83■□□□□ 0.6
GYPC-202ENST00000356887 SGSM3Q96HU1 749 aa18.83■□□□□ 0.6
GYPC-202ENST00000356887 SAMD15Q9P1V8 674 aa18.83■□□□□ 0.6
GYPC-202ENST00000356887 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.83■□□□□ 0.6
GYPC-202ENST00000356887 CCND2P30279 289 aa18.82■□□□□ 0.6
GYPC-202ENST00000356887 IFNAR2P48551 515 aa18.82■□□□□ 0.6
GYPC-202ENST00000356887 BPIFB4P59827 614 aa18.82■□□□□ 0.6
GYPC-202ENST00000356887 PHLDB2Q86SQ0 1253 aa18.82■□□□□ 0.6
GYPC-202ENST00000356887 PARP9Q8IXQ6 854 aa18.82■□□□□ 0.6
GYPC-202ENST00000356887 ARHGEF2Q92974 986 aaKnown RBP18.82■□□□□ 0.6
GYPC-202ENST00000356887 NSRP1Q9H0G5 558 aaKnown RBP18.82■□□□□ 0.6
GYPC-202ENST00000356887 XPNPEP1Q9NQW7 623 aa18.82■□□□□ 0.6
GYPC-202ENST00000356887 R3HDM2Q9Y2K5 976 aaKnown RBP18.82■□□□□ 0.6
GYPC-202ENST00000356887 NEU2Q9Y3R4 380 aa18.82■□□□□ 0.6
GYPC-202ENST00000356887 CTDP1Q9Y5B0 961 aaPredicted RBP18.82■□□□□ 0.6
GYPC-202ENST00000356887 WDR81Q562E7 1941 aa18.82■□□□□ 0.6
GYPC-202ENST00000356887 PROSCO94903 275 aa18.81■□□□□ 0.6
GYPC-202ENST00000356887 GSTA1P08263 222 aa18.81■□□□□ 0.6
GYPC-202ENST00000356887 CENPCQ03188 943 aa18.81■□□□□ 0.6
GYPC-202ENST00000356887 BAATQ14032 418 aaPredicted RBP18.81■□□□□ 0.6
GYPC-202ENST00000356887 LLGL2Q6P1M3 1020 aa18.81■□□□□ 0.6
GYPC-202ENST00000356887 MCPH1Q8NEM0 835 aa18.81■□□□□ 0.6
GYPC-202ENST00000356887 ATP6V0A1Q93050 837 aa18.81■□□□□ 0.6
GYPC-202ENST00000356887 CD248Q9HCU0 757 aa18.81■□□□□ 0.6
GYPC-202ENST00000356887 ANAPC5Q9UJX4 755 aa18.81■□□□□ 0.6
GYPC-202ENST00000356887 SCAF8Q9UPN6 1271 aaKnown RBP18.81■□□□□ 0.6
GYPC-202ENST00000356887 NFKBIEO00221 500 aa18.81■□□□□ 0.6
GYPC-202ENST00000356887 MAFGO15525 162 aa18.81■□□□□ 0.6
GYPC-202ENST00000356887 EXTL3O43909 919 aa18.81■□□□□ 0.6
GYPC-202ENST00000356887 SORBS3O60504 671 aa18.81■□□□□ 0.6
GYPC-202ENST00000356887 TCEA3O75764 348 aa18.81■□□□□ 0.6
GYPC-202ENST00000356887 DGAT1O75907 488 aa18.81■□□□□ 0.6
GYPC-202ENST00000356887 GAS8O95995 478 aa18.81■□□□□ 0.6
GYPC-202ENST00000356887 ATF2P15336 505 aa18.81■□□□□ 0.6
GYPC-202ENST00000356887 KLF1Q13351 362 aaPredicted RBP18.81■□□□□ 0.6
GYPC-202ENST00000356887 PSMD6Q15008 389 aa18.81■□□□□ 0.6
GYPC-202ENST00000356887 TRIP13Q15645 432 aaPredicted RBP18.81■□□□□ 0.6
GYPC-202ENST00000356887 VSTM1Q6UX27 236 aa18.81■□□□□ 0.6
GYPC-202ENST00000356887 MON1BQ7L1V2 547 aa18.81■□□□□ 0.6
GYPC-202ENST00000356887 BICD1Q96G01 975 aa18.81■□□□□ 0.6
GYPC-202ENST00000356887 TRAIPQ9BWF2 469 aa18.81■□□□□ 0.6
GYPC-202ENST00000356887 RPAP3Q9H6T3 665 aaPredicted RBP18.81■□□□□ 0.6
GYPC-202ENST00000356887 KIAA1586Q9HCI6 787 aa18.81■□□□□ 0.6
GYPC-202ENST00000356887 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.81■□□□□ 0.6
GYPC-202ENST00000356887 ARHGAP28Q9P2N2 729 aa18.81■□□□□ 0.6
GYPC-202ENST00000356887 ZNRF3Q9ULT6 936 aa18.81■□□□□ 0.6
GYPC-202ENST00000356887 SLC12A4Q9UP95 1085 aa18.81■□□□□ 0.6
GYPC-202ENST00000356887 DKC1O60832 514 aaKnown RBP eCLIP18.8■□□□□ 0.6
GYPC-202ENST00000356887 HLA-DRAP01903 254 aa18.8■□□□□ 0.6
GYPC-202ENST00000356887 C4BPAP04003 597 aaKnown RBP18.8■□□□□ 0.6
GYPC-202ENST00000356887 NR3C2P08235 984 aa18.8■□□□□ 0.6
GYPC-202ENST00000356887 CREB1P16220 341 aa18.8■□□□□ 0.6
GYPC-202ENST00000356887 KCNA2P16389 499 aa18.8■□□□□ 0.6
GYPC-202ENST00000356887 CALRP27797 417 aaKnown RBP18.8■□□□□ 0.6
GYPC-202ENST00000356887 ATP5DP30049 168 aa18.8■□□□□ 0.6
GYPC-202ENST00000356887 NSFP46459 744 aaKnown RBP18.8■□□□□ 0.6
GYPC-202ENST00000356887 KYNUQ16719 465 aa18.8■□□□□ 0.6
GYPC-202ENST00000356887 ZACNQ401N2 412 aa18.8■□□□□ 0.6
GYPC-202ENST00000356887 UMODL1Q5DID0 1318 aa18.8■□□□□ 0.6
GYPC-202ENST00000356887 WDR44Q5JSH3 913 aa18.8■□□□□ 0.6
GYPC-202ENST00000356887 ARID2Q68CP9 1835 aa18.8■□□□□ 0.6
GYPC-202ENST00000356887 SWSAP1Q6NVH7 229 aa18.8■□□□□ 0.6
GYPC-202ENST00000356887 ZKSCAN4Q969J2 545 aaPredicted RBP18.8■□□□□ 0.6
GYPC-202ENST00000356887 TEPSINQ96N21 525 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms