RNA–Protein interactions for RNA: ENST00000336057.9

HDAC5-202, Transcript of histone deacetylase 5, humanhuman

TSL 1 (best) BASIC

Gene HDAC5, Length 5,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-202ENST00000336057 ESRRGP62508 458 aa16.6■□□□□ 0.25
HDAC5-202ENST00000336057 RSBN1LQ6PCB5 846 aaPredicted RBP16.6■□□□□ 0.25
HDAC5-202ENST00000336057 MDM1Q8TC05 714 aa16.6■□□□□ 0.25
HDAC5-202ENST00000336057 CAVIN3Q969G5 261 aa16.6■□□□□ 0.25
HDAC5-202ENST00000336057 ALKBH8Q96BT7 664 aaKnown RBP16.6■□□□□ 0.25
HDAC5-202ENST00000336057 TRIM67Q6ZTA4 783 aa16.6■□□□□ 0.25
HDAC5-202ENST00000336057 ACAD11Q709F0 780 aa16.6■□□□□ 0.25
HDAC5-202ENST00000336057 MYCBPAPQ8TBZ2 947 aa16.6■□□□□ 0.25
HDAC5-202ENST00000336057 TBX20Q9UMR3 447 aa16.6■□□□□ 0.25
HDAC5-202ENST00000336057 EXTL3O43909 919 aa16.6■□□□□ 0.25
HDAC5-202ENST00000336057 HNRNPCL1O60812 293 aaKnown RBP16.6■□□□□ 0.25
HDAC5-202ENST00000336057 GLI1P08151 1106 aa16.6■□□□□ 0.25
HDAC5-202ENST00000336057 EPHB1P54762 984 aa16.6■□□□□ 0.25
HDAC5-202ENST00000336057 MXD4Q14582 209 aaPredicted RBP16.6■□□□□ 0.25
HDAC5-202ENST00000336057 ACAD10Q6JQN1 1059 aa16.6■□□□□ 0.25
HDAC5-202ENST00000336057 C4orf50Q6ZRC1 276 aa16.6■□□□□ 0.25
HDAC5-202ENST00000336057 RYBPQ8N488 228 aaPredicted RBP16.6■□□□□ 0.25
HDAC5-202ENST00000336057 KIF12Q96FN5 646 aa16.6■□□□□ 0.25
HDAC5-202ENST00000336057 PNMA5Q96PV4 448 aa16.6■□□□□ 0.25
HDAC5-202ENST00000336057 WWP1Q9H0M0 922 aa16.6■□□□□ 0.25
HDAC5-202ENST00000336057 ZBTB12Q9Y330 459 aaPredicted RBP16.6■□□□□ 0.25
HDAC5-202ENST00000336057 MST1RQ04912 1400 aa16.6■□□□□ 0.25
HDAC5-202ENST00000336057 A0A0A6YYK5 440 aaPredicted RBP16.6■□□□□ 0.25
HDAC5-202ENST00000336057 F5H423 210 aaPredicted RBP16.6■□□□□ 0.25
HDAC5-202ENST00000336057 DIAPH2O60879 1101 aa16.6■□□□□ 0.25
HDAC5-202ENST00000336057 SASH3O75995 380 aa16.6■□□□□ 0.25
HDAC5-202ENST00000336057 PDHA1P08559 390 aa16.6■□□□□ 0.25
HDAC5-202ENST00000336057 OCRLQ01968 901 aa16.6■□□□□ 0.25
HDAC5-202ENST00000336057 AP1B1Q10567 949 aa16.6■□□□□ 0.25
HDAC5-202ENST00000336057 KYAT1Q16773 422 aa16.6■□□□□ 0.25
HDAC5-202ENST00000336057 Q4G0T1 1027 aa16.6■□□□□ 0.25
HDAC5-202ENST00000336057 COL23A1Q86Y22 540 aaPredicted RBP16.6■□□□□ 0.25
HDAC5-202ENST00000336057 PIP4K2CQ8TBX8 421 aa16.6■□□□□ 0.25
HDAC5-202ENST00000336057 UPF3AQ9H1J1 476 aaKnown RBP16.6■□□□□ 0.25
HDAC5-202ENST00000336057 SLC4A1P02730 911 aa16.59■□□□□ 0.25
HDAC5-202ENST00000336057 TYK2P29597 1187 aa16.59■□□□□ 0.25
HDAC5-202ENST00000336057 CASP2P42575 452 aa16.59■□□□□ 0.25
HDAC5-202ENST00000336057 GPR162Q16538 588 aa16.59■□□□□ 0.25
HDAC5-202ENST00000336057 KCNV1Q6PIU1 500 aa16.59■□□□□ 0.25
HDAC5-202ENST00000336057 C3orf67Q6ZVT6 689 aa16.59■□□□□ 0.25
HDAC5-202ENST00000336057 TSC22D3Q99576 134 aa16.59■□□□□ 0.25
HDAC5-202ENST00000336057 FAM167BQ9BTA0 163 aa16.59■□□□□ 0.25
HDAC5-202ENST00000336057 TMBIM4Q9HC24 238 aa16.59■□□□□ 0.25
HDAC5-202ENST00000336057 RIMBP3CA6NJZ7 1639 aa16.59■□□□□ 0.25
HDAC5-202ENST00000336057 RIMBP3BA6NNM3 1639 aa16.59■□□□□ 0.25
HDAC5-202ENST00000336057 RIMBP3Q9UFD9 1639 aa16.59■□□□□ 0.25
HDAC5-202ENST00000336057 TNS2Q63HR2 1409 aa16.59■□□□□ 0.25
HDAC5-202ENST00000336057 PDGFRAP16234 1089 aa16.59■□□□□ 0.25
HDAC5-202ENST00000336057 ADORA2BP29275 332 aa16.59■□□□□ 0.25
HDAC5-202ENST00000336057 MEA1Q16626 185 aa16.59■□□□□ 0.25
HDAC5-202ENST00000336057 EFHC2Q5JST6 749 aa16.59■□□□□ 0.25
HDAC5-202ENST00000336057 MYLK4Q86YV6 388 aaPredicted RBP16.59■□□□□ 0.25
HDAC5-202ENST00000336057 C3orf20Q8ND61 904 aa16.59■□□□□ 0.25
HDAC5-202ENST00000336057 KCNN4O15554 427 aa16.59■□□□□ 0.25
HDAC5-202ENST00000336057 RALAP11233 206 aa16.59■□□□□ 0.25
HDAC5-202ENST00000336057 PMLP29590 882 aa16.59■□□□□ 0.25
HDAC5-202ENST00000336057 AP2B1P63010 937 aa16.59■□□□□ 0.25
HDAC5-202ENST00000336057 XRRA1Q6P2D8 792 aa16.59■□□□□ 0.25
HDAC5-202ENST00000336057 RIBC1Q8N443 379 aaPredicted RBP16.59■□□□□ 0.25
HDAC5-202ENST00000336057 SKA2Q8WVK7 121 aaPredicted RBP16.59■□□□□ 0.25
HDAC5-202ENST00000336057 CENPKQ9BS16 269 aa16.59■□□□□ 0.25
HDAC5-202ENST00000336057 C17orf75Q9HAS0 396 aa16.59■□□□□ 0.25
HDAC5-202ENST00000336057 AIPL1Q9NZN9 384 aa16.59■□□□□ 0.25
HDAC5-202ENST00000336057 TRIM33Q9UPN9 1127 aa16.59■□□□□ 0.25
HDAC5-202ENST00000336057 F8VZ95 297 aa16.59■□□□□ 0.25
HDAC5-202ENST00000336057 ARHGEF26Q96DR7 871 aa16.59■□□□□ 0.25
HDAC5-202ENST00000336057 DRC3Q9H069 523 aa16.59■□□□□ 0.25
HDAC5-202ENST00000336057 GTPBP10A4D1E9 387 aaKnown RBP16.58■□□□□ 0.25
HDAC5-202ENST00000336057 TWF2Q6IBS0 349 aaKnown RBP16.58■□□□□ 0.25
HDAC5-202ENST00000336057 SEPT1Q8WYJ6 367 aa16.58■□□□□ 0.25
HDAC5-202ENST00000336057 SERPINB12Q96P63 405 aa16.58■□□□□ 0.25
HDAC5-202ENST00000336057 EHD4Q9H223 541 aa16.58■□□□□ 0.25
HDAC5-202ENST00000336057 TKFCQ3LXA3 575 aa16.58■□□□□ 0.24
HDAC5-202ENST00000336057 RDM1Q8NG50 284 aa16.58■□□□□ 0.24
HDAC5-202ENST00000336057 FEZF2Q8TBJ5 459 aa16.58■□□□□ 0.24
HDAC5-202ENST00000336057 MMP19Q99542 508 aa16.58■□□□□ 0.24
HDAC5-202ENST00000336057 INTS13Q9NVM9 706 aa16.58■□□□□ 0.24
HDAC5-202ENST00000336057 POLRMTO00411 1230 aaKnown RBP16.58■□□□□ 0.24
HDAC5-202ENST00000336057 SGPL1O95470 568 aa16.58■□□□□ 0.24
HDAC5-202ENST00000336057 RPS6P62753 249 aaKnown RBP16.58■□□□□ 0.24
HDAC5-202ENST00000336057 ZNF720Q7Z2F6 126 aa16.58■□□□□ 0.24
HDAC5-202ENST00000336057 AGGF1Q8N302 714 aaeCLIP16.58■□□□□ 0.24
HDAC5-202ENST00000336057 ZNF280CQ8ND82 737 aa16.58■□□□□ 0.24
HDAC5-202ENST00000336057 TTC1Q99614 292 aa16.58■□□□□ 0.24
HDAC5-202ENST00000336057 HAUS8Q9BT25 410 aa16.58■□□□□ 0.24
HDAC5-202ENST00000336057 TSSK1BQ9BXA7 367 aa16.58■□□□□ 0.24
HDAC5-202ENST00000336057 OSGEPQ9NPF4 335 aa16.58■□□□□ 0.24
HDAC5-202ENST00000336057 XPO7Q9UIA9 1087 aaKnown RBP16.58■□□□□ 0.24
HDAC5-202ENST00000336057 BCL9O00512 1426 aa16.58■□□□□ 0.24
HDAC5-202ENST00000336057 H3BRJ5 948 aa16.58■□□□□ 0.24
HDAC5-202ENST00000336057 RFC5P40937 340 aa16.58■□□□□ 0.24
HDAC5-202ENST00000336057 ERP27Q96DN0 273 aa16.58■□□□□ 0.24
HDAC5-202ENST00000336057 GMCL1Q96IK5 515 aa16.58■□□□□ 0.24
HDAC5-202ENST00000336057 BTBD6Q96KE9 485 aa16.58■□□□□ 0.24
HDAC5-202ENST00000336057 ZDHHC15Q96MV8 337 aa16.58■□□□□ 0.24
HDAC5-202ENST00000336057 ACAP3Q96P50 834 aa16.58■□□□□ 0.24
HDAC5-202ENST00000336057 KIFC3Q9BVG8 833 aa16.58■□□□□ 0.24
HDAC5-202ENST00000336057 FSD1LQ9BXM9 530 aa16.58■□□□□ 0.24
HDAC5-202ENST00000336057 TMEM39BQ9GZU3 492 aa16.58■□□□□ 0.24
HDAC5-202ENST00000336057 NPHS2Q9NP85 383 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms