RNA–Protein interactions for RNA: ENST00000324306.10

ZKSCAN1-201, Transcript of zinc finger with KRAB and SCAN domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZKSCAN1, Length 9,418 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN1-201ENST00000324306 KRT6CP48668 564 aa9.88□□□□□ -0.83
ZKSCAN1-201ENST00000324306 PTPN12Q05209 780 aaKnown RBP9.88□□□□□ -0.83
ZKSCAN1-201ENST00000324306 GRM4Q14833 912 aa9.88□□□□□ -0.83
ZKSCAN1-201ENST00000324306 C4orf50Q6ZRC1 276 aa9.88□□□□□ -0.83
ZKSCAN1-201ENST00000324306 AGBL1Q96MI9 1066 aa9.88□□□□□ -0.83
ZKSCAN1-201ENST00000324306 KLHL25Q9H0H3 589 aa9.88□□□□□ -0.83
ZKSCAN1-201ENST00000324306 TBC1D22BQ9NU19 505 aa9.88□□□□□ -0.83
ZKSCAN1-201ENST00000324306 VPS9D1Q9Y2B5 631 aa9.88□□□□□ -0.83
ZKSCAN1-201ENST00000324306 ZC3H13Q5T200 1668 aaKnown RBP9.88□□□□□ -0.83
ZKSCAN1-201ENST00000324306 A0A087WWV3 80 aa9.88□□□□□ -0.83
ZKSCAN1-201ENST00000324306 KRT87PA6NCN2 255 aa9.88□□□□□ -0.83
ZKSCAN1-201ENST00000324306 RXRGP48443 463 aa9.88□□□□□ -0.83
ZKSCAN1-201ENST00000324306 STILQ15468 1287 aa9.88□□□□□ -0.83
ZKSCAN1-201ENST00000324306 TAB1Q15750 504 aa9.88□□□□□ -0.83
ZKSCAN1-201ENST00000324306 CCDC85BQ15834 202 aaPredicted RBP9.88□□□□□ -0.83
ZKSCAN1-201ENST00000324306 TMC5Q6UXY8 1006 aa9.88□□□□□ -0.83
ZKSCAN1-201ENST00000324306 CCDC126Q96EE4 140 aa9.88□□□□□ -0.83
ZKSCAN1-201ENST00000324306 TMBIM4Q9HC24 238 aa9.88□□□□□ -0.83
ZKSCAN1-201ENST00000324306 CASZ1Q86V15 1759 aa9.88□□□□□ -0.83
ZKSCAN1-201ENST00000324306 FAM95CA0A1B0GW59 222 aa9.88□□□□□ -0.83
ZKSCAN1-201ENST00000324306 POLD1P28340 1107 aa9.88□□□□□ -0.83
ZKSCAN1-201ENST00000324306 DLGAP5Q15398 846 aa9.88□□□□□ -0.83
ZKSCAN1-201ENST00000324306 TMEM270Q6UE05 265 aa9.88□□□□□ -0.83
ZKSCAN1-201ENST00000324306 ATXN2LQ8WWM7 1075 aaKnown RBP9.88□□□□□ -0.83
ZKSCAN1-201ENST00000324306 LY9Q9HBG7 655 aa9.88□□□□□ -0.83
ZKSCAN1-201ENST00000324306 SEC24DO94855 1032 aaPredicted RBP9.88□□□□□ -0.83
ZKSCAN1-201ENST00000324306 TNFRSF8P28908 595 aa9.88□□□□□ -0.83
ZKSCAN1-201ENST00000324306 BBS7Q8IWZ6 715 aa9.88□□□□□ -0.83
ZKSCAN1-201ENST00000324306 IFT43Q96FT9 208 aa9.88□□□□□ -0.83
ZKSCAN1-201ENST00000324306 RIC8BQ9NVN3 520 aa9.88□□□□□ -0.83
ZKSCAN1-201ENST00000324306 PLA2R1Q13018 1463 aa9.88□□□□□ -0.83
ZKSCAN1-201ENST00000324306 PNMA8CA0A1B0GUJ8 204 aa9.88□□□□□ -0.83
ZKSCAN1-201ENST00000324306 ZBTB5O15062 677 aa9.88□□□□□ -0.83
ZKSCAN1-201ENST00000324306 PLOD1Q02809 727 aaPredicted RBP9.88□□□□□ -0.83
ZKSCAN1-201ENST00000324306 RYBPQ8N488 228 aaPredicted RBP9.88□□□□□ -0.83
ZKSCAN1-201ENST00000324306 TC2NQ8N9U0 490 aa9.88□□□□□ -0.83
ZKSCAN1-201ENST00000324306 C20orf96Q9NUD7 363 aaPredicted RBP9.88□□□□□ -0.83
ZKSCAN1-201ENST00000324306 APEX2Q9UBZ4 518 aa9.88□□□□□ -0.83
ZKSCAN1-201ENST00000324306 RSL24D1Q9UHA3 163 aaKnown RBP9.88□□□□□ -0.83
ZKSCAN1-201ENST00000324306 RPL26L1Q9UNX3 145 aaKnown RBP9.88□□□□□ -0.83
ZKSCAN1-201ENST00000324306 USP32Q8NFA0 1604 aa9.88□□□□□ -0.83
ZKSCAN1-201ENST00000324306 XPO1O14980 1071 aaKnown RBP9.88□□□□□ -0.83
ZKSCAN1-201ENST00000324306 DTNBO60941 627 aa9.88□□□□□ -0.83
ZKSCAN1-201ENST00000324306 PTPN21Q16825 1174 aa9.88□□□□□ -0.83
ZKSCAN1-201ENST00000324306 ASAP3Q8TDY4 903 aa9.88□□□□□ -0.83
ZKSCAN1-201ENST00000324306 EXT2Q93063 718 aa9.88□□□□□ -0.83
ZKSCAN1-201ENST00000324306 FAM162AQ96A26 154 aa9.88□□□□□ -0.83
ZKSCAN1-201ENST00000324306 C1orf50Q9BV19 199 aa9.88□□□□□ -0.83
ZKSCAN1-201ENST00000324306 APOL6Q9BWW8 343 aa9.88□□□□□ -0.83
ZKSCAN1-201ENST00000324306 SLC13A1Q9BZW2 595 aa9.88□□□□□ -0.83
ZKSCAN1-201ENST00000324306 RABGEF1Q9UJ41 708 aa9.88□□□□□ -0.83
ZKSCAN1-201ENST00000324306 LONRF1Q17RB8 773 aa9.87□□□□□ -0.83
ZKSCAN1-201ENST00000324306 NIM1KQ8IY84 436 aa9.87□□□□□ -0.83
ZKSCAN1-201ENST00000324306 PTK2BQ14289 1009 aa9.87□□□□□ -0.83
ZKSCAN1-201ENST00000324306 CCNL1Q9UK58 526 aaPredicted RBP9.87□□□□□ -0.83
ZKSCAN1-201ENST00000324306 RAD51CO43502 376 aa9.87□□□□□ -0.83
ZKSCAN1-201ENST00000324306 TSTA3Q13630 321 aaPredicted RBP9.87□□□□□ -0.83
ZKSCAN1-201ENST00000324306 TRIP4Q15650 581 aaPredicted RBP9.87□□□□□ -0.83
ZKSCAN1-201ENST00000324306 CCNJLQ8IV13 435 aa9.87□□□□□ -0.83
ZKSCAN1-201ENST00000324306 PPIL6Q8IXY8 311 aa9.87□□□□□ -0.83
ZKSCAN1-201ENST00000324306 SLC35G2Q8TBE7 412 aa9.87□□□□□ -0.83
ZKSCAN1-201ENST00000324306 TMA16Q96EY4 203 aaKnown RBP9.87□□□□□ -0.83
ZKSCAN1-201ENST00000324306 PCDHGB4Q9UN71 923 aa9.87□□□□□ -0.83
ZKSCAN1-201ENST00000324306 SOX13Q9UN79 622 aa9.87□□□□□ -0.83
ZKSCAN1-201ENST00000324306 SPRP35270 261 aaPredicted RBP9.87□□□□□ -0.83
ZKSCAN1-201ENST00000324306 MIGA2Q7L4E1 593 aa9.87□□□□□ -0.83
ZKSCAN1-201ENST00000324306 CCSER1Q9C0I3 900 aa9.87□□□□□ -0.83
ZKSCAN1-201ENST00000324306 KLHL31Q9H511 634 aa9.87□□□□□ -0.83
ZKSCAN1-201ENST00000324306 BARHL2Q9NY43 387 aa9.87□□□□□ -0.83
ZKSCAN1-201ENST00000324306 UBAP1Q9NZ09 502 aa9.87□□□□□ -0.83
ZKSCAN1-201ENST00000324306 PI4K2BG5E9Z4 385 aa9.87□□□□□ -0.83
ZKSCAN1-201ENST00000324306 MTSS1O43312 755 aa9.87□□□□□ -0.83
ZKSCAN1-201ENST00000324306 HADHAP40939 763 aa9.87□□□□□ -0.83
ZKSCAN1-201ENST00000324306 USP11P51784 963 aa9.87□□□□□ -0.83
ZKSCAN1-201ENST00000324306 PPP6R3Q5H9R7 873 aaPredicted RBP9.87□□□□□ -0.83
ZKSCAN1-201ENST00000324306 BARGINQ6ZT62 677 aa9.87□□□□□ -0.83
ZKSCAN1-201ENST00000324306 NLRP9Q7RTR0 991 aa9.87□□□□□ -0.83
ZKSCAN1-201ENST00000324306 KIF2BQ8N4N8 673 aa9.87□□□□□ -0.83
ZKSCAN1-201ENST00000324306 TFCP2L1Q9NZI6 479 aa9.87□□□□□ -0.83
ZKSCAN1-201ENST00000324306 CFAP99D6REC4 459 aa9.87□□□□□ -0.83
ZKSCAN1-201ENST00000324306 PHKA1P46020 1223 aa9.87□□□□□ -0.83
ZKSCAN1-201ENST00000324306 NSUN2Q08J23 767 aaKnown RBP eCLIP9.87□□□□□ -0.83
ZKSCAN1-201ENST00000324306 CCDC142Q17RM4 750 aa9.87□□□□□ -0.83
ZKSCAN1-201ENST00000324306 ACSBG1Q96GR2 724 aa9.87□□□□□ -0.83
ZKSCAN1-201ENST00000324306 PAK5Q9P286 719 aa9.87□□□□□ -0.83
ZKSCAN1-201ENST00000324306 COMMD3-BMI1R4GMX3 469 aa9.87□□□□□ -0.83
ZKSCAN1-201ENST00000324306 AREL1O15033 823 aa9.87□□□□□ -0.83
ZKSCAN1-201ENST00000324306 CBFA2T3O75081 653 aa9.87□□□□□ -0.83
ZKSCAN1-201ENST00000324306 RHOBTB3O94955 611 aa9.87□□□□□ -0.83
ZKSCAN1-201ENST00000324306 PRAMEP78395 509 aa9.87□□□□□ -0.83
ZKSCAN1-201ENST00000324306 BEST2Q8NFU1 509 aa9.87□□□□□ -0.83
ZKSCAN1-201ENST00000324306 ZSWIM5Q9P217 1185 aa9.87□□□□□ -0.83
ZKSCAN1-201ENST00000324306 THRAP10827 490 aa9.86□□□□□ -0.83
ZKSCAN1-201ENST00000324306 KCNA2P16389 499 aa9.86□□□□□ -0.83
ZKSCAN1-201ENST00000324306 TARSP26639 723 aaKnown RBP9.86□□□□□ -0.83
ZKSCAN1-201ENST00000324306 ADORA1P30542 326 aa9.86□□□□□ -0.83
ZKSCAN1-201ENST00000324306 KCNK10P57789 538 aa9.86□□□□□ -0.83
ZKSCAN1-201ENST00000324306 ACTRT1Q8TDG2 376 aa9.86□□□□□ -0.83
ZKSCAN1-201ENST00000324306 TRPC4APQ8TEL6 797 aa9.86□□□□□ -0.83
ZKSCAN1-201ENST00000324306 E2F7Q96AV8 911 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms