RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 STBD1O95210 358 aa16.13■□□□□ 0.17
CSDC2-201ENST00000306149 SSR1P43307 286 aaKnown RBP16.13■□□□□ 0.17
CSDC2-201ENST00000306149 ITGA8P53708 1063 aa16.13■□□□□ 0.17
CSDC2-201ENST00000306149 NLRP11P59045 1033 aaKnown RBP16.13■□□□□ 0.17
CSDC2-201ENST00000306149 MTERF2Q49AM1 385 aa16.13■□□□□ 0.17
CSDC2-201ENST00000306149 SEZ6Q53EL9 994 aa16.13■□□□□ 0.17
CSDC2-201ENST00000306149 PIGWQ7Z7B1 504 aa16.13■□□□□ 0.17
CSDC2-201ENST00000306149 VSIG10LQ86VR7 867 aa16.13■□□□□ 0.17
CSDC2-201ENST00000306149 C12orf50Q8NA57 414 aaPredicted RBP16.13■□□□□ 0.17
CSDC2-201ENST00000306149 NTPCRQ9BSD7 190 aaKnown RBP16.13■□□□□ 0.17
CSDC2-201ENST00000306149 CD2APQ9Y5K6 639 aa16.13■□□□□ 0.17
CSDC2-201ENST00000306149 PRAMEF18Q5VWM3 479 aa16.12■□□□□ 0.17
CSDC2-201ENST00000306149 MAGEC3Q8TD91 643 aa16.12■□□□□ 0.17
CSDC2-201ENST00000306149 TMEM143Q96AN5 459 aa16.12■□□□□ 0.17
CSDC2-201ENST00000306149 KLHL11Q9NVR0 708 aa16.12■□□□□ 0.17
CSDC2-201ENST00000306149 HLA-DRAP01903 254 aa16.12■□□□□ 0.17
CSDC2-201ENST00000306149 GSTA1P08263 222 aa16.12■□□□□ 0.17
CSDC2-201ENST00000306149 RALAP11233 206 aa16.12■□□□□ 0.17
CSDC2-201ENST00000306149 IVDP26440 423 aa16.12■□□□□ 0.17
CSDC2-201ENST00000306149 NF2P35240 595 aa16.12■□□□□ 0.17
CSDC2-201ENST00000306149 RDXP35241 583 aaKnown RBP16.12■□□□□ 0.17
CSDC2-201ENST00000306149 ADCY8P40145 1251 aa16.12■□□□□ 0.17
CSDC2-201ENST00000306149 EN1Q05925 392 aaPredicted RBP16.12■□□□□ 0.17
CSDC2-201ENST00000306149 PREPLQ4J6C6 727 aaPredicted RBP16.12■□□□□ 0.17
CSDC2-201ENST00000306149 ZBTB41Q5SVQ8 909 aa16.12■□□□□ 0.17
CSDC2-201ENST00000306149 MFSD5Q6N075 450 aa16.12■□□□□ 0.17
CSDC2-201ENST00000306149 RPAINQ86UA6 219 aa16.12■□□□□ 0.17
CSDC2-201ENST00000306149 SLC17A8Q8NDX2 589 aa16.12■□□□□ 0.17
CSDC2-201ENST00000306149 AGBL3Q8NEM8 1001 aa16.12■□□□□ 0.17
CSDC2-201ENST00000306149 SPIRE2Q8WWL2 714 aa16.12■□□□□ 0.17
CSDC2-201ENST00000306149 POLR3FQ9H1D9 316 aaPredicted RBP16.12■□□□□ 0.17
CSDC2-201ENST00000306149 TBK1Q9UHD2 729 aa16.12■□□□□ 0.17
CSDC2-201ENST00000306149 IBSPP21815 317 aaPredicted RBP16.11■□□□□ 0.17
CSDC2-201ENST00000306149 MAP2K2P36507 400 aa16.11■□□□□ 0.17
CSDC2-201ENST00000306149 NSFP46459 744 aaKnown RBP16.11■□□□□ 0.17
CSDC2-201ENST00000306149 LIG4P49917 911 aa16.11■□□□□ 0.17
CSDC2-201ENST00000306149 TAS2R40P59535 323 aa16.11■□□□□ 0.17
CSDC2-201ENST00000306149 PRKCEQ02156 737 aa16.11■□□□□ 0.17
CSDC2-201ENST00000306149 GCNT1Q02742 428 aa16.11■□□□□ 0.17
CSDC2-201ENST00000306149 CNGA2Q16280 664 aa16.11■□□□□ 0.17
CSDC2-201ENST00000306149 TDRD10Q5VZ19 366 aaKnown RBP16.11■□□□□ 0.17
CSDC2-201ENST00000306149 SNRNP48Q6IEG0 339 aaKnown RBP16.11■□□□□ 0.17
CSDC2-201ENST00000306149 SEPT14Q6ZU15 432 aa16.11■□□□□ 0.17
CSDC2-201ENST00000306149 ANKS1BQ7Z6G8 1248 aa16.11■□□□□ 0.17
CSDC2-201ENST00000306149 ANKRD42Q8N9B4 389 aa16.11■□□□□ 0.17
CSDC2-201ENST00000306149 ARHGEF2Q92974 986 aaKnown RBP16.11■□□□□ 0.17
CSDC2-201ENST00000306149 DDX27Q96GQ7 796 aaKnown RBP16.11■□□□□ 0.17
CSDC2-201ENST00000306149 ZBED3Q96IU2 234 aaPredicted RBP16.11■□□□□ 0.17
CSDC2-201ENST00000306149 FNBP1Q96RU3 617 aa16.11■□□□□ 0.17
CSDC2-201ENST00000306149 KCNA2P16389 499 aa16.11■□□□□ 0.17
CSDC2-201ENST00000306149 CD58P19256 250 aa16.11■□□□□ 0.17
CSDC2-201ENST00000306149 CCND2P30279 289 aa16.11■□□□□ 0.17
CSDC2-201ENST00000306149 DSG3P32926 999 aa16.11■□□□□ 0.17
CSDC2-201ENST00000306149 SAMD3Q8N6K7 520 aa16.11■□□□□ 0.17
CSDC2-201ENST00000306149 MTMR14Q8NCE2 650 aa16.11■□□□□ 0.17
CSDC2-201ENST00000306149 PLVAPQ9BX97 442 aa16.11■□□□□ 0.17
CSDC2-201ENST00000306149 DCLK3Q9C098 648 aa16.11■□□□□ 0.17
CSDC2-201ENST00000306149 KIAA1217Q5T5P2 1943 aa16.11■□□□□ 0.17
CSDC2-201ENST00000306149 PSME4Q14997 1843 aa16.11■□□□□ 0.17
CSDC2-201ENST00000306149 KCNA3P22001 575 aa16.1■□□□□ 0.17
CSDC2-201ENST00000306149 PIK3CAP42336 1068 aa16.1■□□□□ 0.17
CSDC2-201ENST00000306149 ZNF568Q3ZCX4 644 aa16.1■□□□□ 0.17
CSDC2-201ENST00000306149 ATP13A4Q4VNC1 1196 aa16.1■□□□□ 0.17
CSDC2-201ENST00000306149 BRDTQ58F21 947 aaPredicted RBP16.1■□□□□ 0.17
CSDC2-201ENST00000306149 RHBDF2Q6PJF5 856 aa16.1■□□□□ 0.17
CSDC2-201ENST00000306149 TMEM270Q6UE05 265 aa16.1■□□□□ 0.17
CSDC2-201ENST00000306149 TAOK1Q7L7X3 1001 aa16.1■□□□□ 0.17
CSDC2-201ENST00000306149 USP37Q86T82 979 aa16.1■□□□□ 0.17
CSDC2-201ENST00000306149 DYDC1Q8WWB3 177 aa16.1■□□□□ 0.17
CSDC2-201ENST00000306149 HAPLN2Q9GZV7 340 aa16.1■□□□□ 0.17
CSDC2-201ENST00000306149 KCNK9Q9NPC2 374 aa16.1■□□□□ 0.17
CSDC2-201ENST00000306149 CYP26B1Q9NR63 512 aa16.1■□□□□ 0.17
CSDC2-201ENST00000306149 WHRNQ9P202 907 aa16.1■□□□□ 0.17
CSDC2-201ENST00000306149 SLC12A4Q9UP95 1085 aa16.1■□□□□ 0.17
CSDC2-201ENST00000306149 PCDHB2Q9Y5E7 798 aa16.1■□□□□ 0.17
CSDC2-201ENST00000306149 HARSP12081 509 aaKnown RBP16.1■□□□□ 0.17
CSDC2-201ENST00000306149 GTF2H1P32780 548 aa16.1■□□□□ 0.17
CSDC2-201ENST00000306149 WDR44Q5JSH3 913 aa16.1■□□□□ 0.17
CSDC2-201ENST00000306149 WLSQ5T9L3 541 aa16.1■□□□□ 0.17
CSDC2-201ENST00000306149 SAMD7Q7Z3H4 446 aa16.1■□□□□ 0.17
CSDC2-201ENST00000306149 ZNF526Q8TF50 670 aaPredicted RBP16.1■□□□□ 0.17
CSDC2-201ENST00000306149 SLCO2A1Q92959 643 aa16.1■□□□□ 0.17
CSDC2-201ENST00000306149 ATP6V0A1Q93050 837 aa16.1■□□□□ 0.17
CSDC2-201ENST00000306149 SNF8Q96H20 258 aa16.1■□□□□ 0.17
CSDC2-201ENST00000306149 ROPN1BQ9BZX4 212 aaPredicted RBP16.1■□□□□ 0.17
CSDC2-201ENST00000306149 NSRP1Q9H0G5 558 aaKnown RBP16.1■□□□□ 0.17
CSDC2-201ENST00000306149 ROPN1Q9HAT0 212 aaPredicted RBP16.1■□□□□ 0.17
CSDC2-201ENST00000306149 APOBEC3GQ9HC16 384 aaKnown RBP16.1■□□□□ 0.17
CSDC2-201ENST00000306149 SAMD15Q9P1V8 674 aa16.1■□□□□ 0.17
CSDC2-201ENST00000306149 ANKFY1Q9P2R3 1169 aa16.1■□□□□ 0.17
CSDC2-201ENST00000306149 WDR81Q562E7 1941 aa16.1■□□□□ 0.17
CSDC2-201ENST00000306149 UMODL1Q5DID0 1318 aa16.1■□□□□ 0.17
CSDC2-201ENST00000306149 TMEM120BA0PK00 339 aa16.09■□□□□ 0.17
CSDC2-201ENST00000306149 DGAT1O75907 488 aa16.09■□□□□ 0.17
CSDC2-201ENST00000306149 VNN1O95497 513 aa16.09■□□□□ 0.17
CSDC2-201ENST00000306149 MCCD1P59942 119 aaPredicted RBP16.09■□□□□ 0.17
CSDC2-201ENST00000306149 ACTR2P61160 394 aa16.09■□□□□ 0.17
CSDC2-201ENST00000306149 NBPF12Q5TAG4 269 aaPredicted RBP16.09■□□□□ 0.17
CSDC2-201ENST00000306149 C15orf39Q6ZRI6 1047 aa16.09■□□□□ 0.17
CSDC2-201ENST00000306149 TRMT10CQ7L0Y3 403 aaKnown RBP16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms