RNA–Protein interactions for RNA: ENST00000299633.6

HDGFL3-201, Transcript of HDGF like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDGFL3, Length 12,733 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-201ENST00000299633 SEC16BQ96JE7 1060 aa11.72□□□□□ -0.53
HDGFL3-201ENST00000299633 DIS3Q9Y2L1 958 aaKnown RBP11.72□□□□□ -0.53
HDGFL3-201ENST00000299633 UGGT1Q9NYU2 1555 aa11.72□□□□□ -0.53
HDGFL3-201ENST00000299633 DDI2Q5TDH0 399 aa11.72□□□□□ -0.53
HDGFL3-201ENST00000299633 LRRC6Q86X45 466 aa11.72□□□□□ -0.53
HDGFL3-201ENST00000299633 LPIN2Q92539 896 aa11.72□□□□□ -0.53
HDGFL3-201ENST00000299633 THTPAQ9BU02 230 aa11.72□□□□□ -0.53
HDGFL3-201ENST00000299633 ZNF222Q9UK12 451 aa11.72□□□□□ -0.53
HDGFL3-201ENST00000299633 APPL1Q9UKG1 709 aa11.72□□□□□ -0.53
HDGFL3-201ENST00000299633 CHD2O14647 1828 aaKnown RBP11.72□□□□□ -0.53
HDGFL3-201ENST00000299633 TSNQ15631 228 aaKnown RBP11.72□□□□□ -0.53
HDGFL3-201ENST00000299633 SYTL3Q4VX76 610 aa11.72□□□□□ -0.53
HDGFL3-201ENST00000299633 CCDC36Q8IYA8 594 aa11.72□□□□□ -0.53
HDGFL3-201ENST00000299633 KIF2BQ8N4N8 673 aa11.72□□□□□ -0.53
HDGFL3-201ENST00000299633 SRPK1Q96SB4 655 aaKnown RBP11.72□□□□□ -0.53
HDGFL3-201ENST00000299633 PACSIN1Q9BY11 444 aa11.72□□□□□ -0.53
HDGFL3-201ENST00000299633 ZNF304Q9HCX3 659 aa11.72□□□□□ -0.53
HDGFL3-201ENST00000299633 TARSL2A2RTX5 802 aaKnown RBP11.72□□□□□ -0.53
HDGFL3-201ENST00000299633 GOLGA8SH3BPF8 625 aa11.72□□□□□ -0.53
HDGFL3-201ENST00000299633 HSD3B2P26439 372 aa11.72□□□□□ -0.53
HDGFL3-201ENST00000299633 SH2D3CQ8N5H7 860 aa11.72□□□□□ -0.53
HDGFL3-201ENST00000299633 HPS4Q9NQG7 708 aa11.72□□□□□ -0.53
HDGFL3-201ENST00000299633 ADCY10Q96PN6 1610 aa11.72□□□□□ -0.53
HDGFL3-201ENST00000299633 PNMA8CA0A1B0GUJ8 204 aa11.72□□□□□ -0.53
HDGFL3-201ENST00000299633 UBAP1LF5GYI3 381 aa11.72□□□□□ -0.53
HDGFL3-201ENST00000299633 RPN2P04844 631 aa11.72□□□□□ -0.53
HDGFL3-201ENST00000299633 KRT20P35900 424 aa11.72□□□□□ -0.53
HDGFL3-201ENST00000299633 ZNF394Q53GI3 561 aa11.72□□□□□ -0.53
HDGFL3-201ENST00000299633 LPCAT2Q7L5N7 544 aa11.72□□□□□ -0.53
HDGFL3-201ENST00000299633 TNIP3Q96KP6 325 aa11.72□□□□□ -0.53
HDGFL3-201ENST00000299633 TSSK1BQ9BXA7 367 aa11.72□□□□□ -0.53
HDGFL3-201ENST00000299633 CHP2O43745 196 aa11.72□□□□□ -0.53
HDGFL3-201ENST00000299633 FYNP06241 537 aa11.72□□□□□ -0.53
HDGFL3-201ENST00000299633 PIK3R1P27986 724 aa11.72□□□□□ -0.53
HDGFL3-201ENST00000299633 PRPF39Q86UA1 669 aaKnown RBP11.72□□□□□ -0.53
HDGFL3-201ENST00000299633 RNF135Q8IUD6 432 aa11.72□□□□□ -0.53
HDGFL3-201ENST00000299633 ANKRD36BP1Q96IX9 119 aa11.72□□□□□ -0.53
HDGFL3-201ENST00000299633 CYLDQ9NQC7 956 aa11.72□□□□□ -0.53
HDGFL3-201ENST00000299633 V9GYQ6 96 aa11.72□□□□□ -0.53
HDGFL3-201ENST00000299633 VSNL1P62760 191 aa11.72□□□□□ -0.53
HDGFL3-201ENST00000299633 MFN1Q8IWA4 741 aa11.72□□□□□ -0.53
HDGFL3-201ENST00000299633 ZNF579Q8NAF0 562 aaKnown RBP11.72□□□□□ -0.53
HDGFL3-201ENST00000299633 RBBP8NLQ8NC74 664 aaPredicted RBP11.72□□□□□ -0.53
HDGFL3-201ENST00000299633 ZNF274Q96GC6 653 aaPredicted RBP11.72□□□□□ -0.53
HDGFL3-201ENST00000299633 TRIP10Q15642 601 aa11.72□□□□□ -0.53
HDGFL3-201ENST00000299633 SLC17A8Q8NDX2 589 aa11.72□□□□□ -0.53
HDGFL3-201ENST00000299633 MAGEB5Q9BZ81 275 aa11.72□□□□□ -0.53
HDGFL3-201ENST00000299633 ESYT3A0FGR9 886 aa11.72□□□□□ -0.53
HDGFL3-201ENST00000299633 CACTIN-AS1Q8N1I8 211 aa11.72□□□□□ -0.53
HDGFL3-201ENST00000299633 MIEF2Q96C03 454 aa11.72□□□□□ -0.53
HDGFL3-201ENST00000299633 EHD3Q9NZN3 535 aa11.72□□□□□ -0.53
HDGFL3-201ENST00000299633 CLCA2Q9UQC9 943 aa11.72□□□□□ -0.53
HDGFL3-201ENST00000299633 ENO3P13929 434 aaPredicted RBP11.72□□□□□ -0.53
HDGFL3-201ENST00000299633 CMA1P23946 247 aa11.72□□□□□ -0.53
HDGFL3-201ENST00000299633 POLNQ7Z5Q5 900 aa11.72□□□□□ -0.53
HDGFL3-201ENST00000299633 HSPH1Q92598 858 aa11.72□□□□□ -0.53
HDGFL3-201ENST00000299633 ELOVL6Q9H5J4 265 aa11.72□□□□□ -0.53
HDGFL3-201ENST00000299633 ZFATQ9P243 1243 aa11.72□□□□□ -0.53
HDGFL3-201ENST00000299633 CDC42BPGQ6DT37 1551 aa11.71□□□□□ -0.53
HDGFL3-201ENST00000299633 ABCA7Q8IZY2 2146 aa11.71□□□□□ -0.53
HDGFL3-201ENST00000299633 MTTPP55157 894 aa11.71□□□□□ -0.53
HDGFL3-201ENST00000299633 SPDYAQ5MJ70 313 aa11.71□□□□□ -0.53
HDGFL3-201ENST00000299633 TCAIMQ8N3R3 496 aa11.71□□□□□ -0.53
HDGFL3-201ENST00000299633 AREL1O15033 823 aa11.71□□□□□ -0.53
HDGFL3-201ENST00000299633 SORBS3O60504 671 aa11.71□□□□□ -0.53
HDGFL3-201ENST00000299633 ARHGDIBP52566 201 aa11.71□□□□□ -0.53
HDGFL3-201ENST00000299633 CUEDC2Q9H467 287 aa11.71□□□□□ -0.53
HDGFL3-201ENST00000299633 CASP5P51878 434 aa11.71□□□□□ -0.53
HDGFL3-201ENST00000299633 GRM1Q13255 1194 aa11.71□□□□□ -0.53
HDGFL3-201ENST00000299633 CCSAPQ6IQ19 270 aaPredicted RBP11.71□□□□□ -0.53
HDGFL3-201ENST00000299633 OTUD5Q96G74 571 aa11.71□□□□□ -0.53
HDGFL3-201ENST00000299633 EYA3Q99504 573 aa11.71□□□□□ -0.53
HDGFL3-201ENST00000299633 SLC39A2Q9NP94 309 aa11.71□□□□□ -0.53
HDGFL3-201ENST00000299633 RPH3AQ9Y2J0 694 aaPredicted RBP11.71□□□□□ -0.53
HDGFL3-201ENST00000299633 CCDC182A6NF36 153 aa11.71□□□□□ -0.53
HDGFL3-201ENST00000299633 ALOX12P18054 663 aa11.71□□□□□ -0.53
HDGFL3-201ENST00000299633 OTUD4Q01804 1114 aaKnown RBP11.71□□□□□ -0.53
HDGFL3-201ENST00000299633 SLC9A6Q92581 669 aa11.71□□□□□ -0.53
HDGFL3-201ENST00000299633 EHD1Q9H4M9 534 aa11.71□□□□□ -0.53
HDGFL3-201ENST00000299633 BABAM1Q9NWV8 329 aa11.71□□□□□ -0.53
HDGFL3-201ENST00000299633 ING4Q9UNL4 249 aa11.71□□□□□ -0.53
HDGFL3-201ENST00000299633 MTERF2Q49AM1 385 aa11.71□□□□□ -0.53
HDGFL3-201ENST00000299633 RERGLQ9H628 205 aa11.71□□□□□ -0.53
HDGFL3-201ENST00000299633 SH3GLB1Q9Y371 365 aa11.71□□□□□ -0.53
HDGFL3-201ENST00000299633 CBFBQ13951 182 aa11.71□□□□□ -0.54
HDGFL3-201ENST00000299633 MSANTD1Q6ZTZ1 278 aa11.71□□□□□ -0.54
HDGFL3-201ENST00000299633 RAB42Q8N4Z0 105 aa11.71□□□□□ -0.54
HDGFL3-201ENST00000299633 KLHL4Q9C0H6 718 aa11.71□□□□□ -0.54
HDGFL3-201ENST00000299633 SCGNO76038 276 aa11.71□□□□□ -0.54
HDGFL3-201ENST00000299633 EIF3EP60228 445 aaKnown RBP11.71□□□□□ -0.54
HDGFL3-201ENST00000299633 POU5F1BQ06416 359 aa11.71□□□□□ -0.54
HDGFL3-201ENST00000299633 FAM149B1Q96BN6 582 aa11.71□□□□□ -0.54
HDGFL3-201ENST00000299633 VPS11Q9H270 941 aa11.71□□□□□ -0.54
HDGFL3-201ENST00000299633 HPCAL4Q9UM19 191 aa11.71□□□□□ -0.54
HDGFL3-201ENST00000299633 IQGAP3Q86VI3 1631 aa11.71□□□□□ -0.54
HDGFL3-201ENST00000299633 RWDD4Q6NW29 188 aaKnown RBP11.71□□□□□ -0.54
HDGFL3-201ENST00000299633 ZCCHC7Q8N3Z6 543 aaKnown RBP11.71□□□□□ -0.54
HDGFL3-201ENST00000299633 ZFRQ96KR1 1074 aaKnown RBP11.71□□□□□ -0.54
HDGFL3-201ENST00000299633 C20orf96Q9NUD7 363 aaPredicted RBP11.71□□□□□ -0.54
HDGFL3-201ENST00000299633 GGA1Q9UJY5 639 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms