RNA–Protein interactions for RNA: ENST00000296129.5

CDCP1-201, Transcript of CUB domain containing protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDCP1, Length 6,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-201ENST00000296129 RSPH10BP0C881 870 aa18.17■□□□□ 0.5
CDCP1-201ENST00000296129 ACTR2P61160 394 aa18.17■□□□□ 0.5
CDCP1-201ENST00000296129 PRAMEP78395 509 aa18.17■□□□□ 0.5
CDCP1-201ENST00000296129 IER5Q5VY09 327 aa18.17■□□□□ 0.5
CDCP1-201ENST00000296129 NUDCD3Q8IVD9 361 aa18.17■□□□□ 0.5
CDCP1-201ENST00000296129 AGPAT3Q9NRZ7 376 aa18.17■□□□□ 0.5
CDCP1-201ENST00000296129 SUN2Q9UH99 717 aa18.17■□□□□ 0.5
CDCP1-201ENST00000296129 KCNH4Q9UQ05 1017 aa18.17■□□□□ 0.5
CDCP1-201ENST00000296129 GRAP2O75791 330 aa18.17■□□□□ 0.5
CDCP1-201ENST00000296129 PIGHQ14442 188 aaPredicted RBP18.17■□□□□ 0.5
CDCP1-201ENST00000296129 KDELC2Q7Z4H8 507 aa18.17■□□□□ 0.5
CDCP1-201ENST00000296129 ZBTB18Q99592 522 aa18.17■□□□□ 0.5
CDCP1-201ENST00000296129 IRAK4Q9NWZ3 460 aa18.17■□□□□ 0.5
CDCP1-201ENST00000296129 TSR3Q9UJK0 312 aaKnown RBP18.17■□□□□ 0.5
CDCP1-201ENST00000296129 TMEM253P0C7T8 217 aa18.17■□□□□ 0.5
CDCP1-201ENST00000296129 COMTP21964 271 aa18.17■□□□□ 0.5
CDCP1-201ENST00000296129 EPC2Q52LR7 807 aa18.17■□□□□ 0.5
CDCP1-201ENST00000296129 C3orf67Q6ZVT6 689 aa18.17■□□□□ 0.5
CDCP1-201ENST00000296129 FAM49BQ9NUQ9 324 aa18.17■□□□□ 0.5
CDCP1-201ENST00000296129 DPYSL4O14531 572 aa18.17■□□□□ 0.5
CDCP1-201ENST00000296129 HBP1O60381 514 aa18.16■□□□□ 0.5
CDCP1-201ENST00000296129 HAUS5O94927 633 aa18.16■□□□□ 0.5
CDCP1-201ENST00000296129 RNF135Q8IUD6 432 aa18.16■□□□□ 0.5
CDCP1-201ENST00000296129 FAM118BQ9BPY3 351 aa18.16■□□□□ 0.5
CDCP1-201ENST00000296129 FAM96AQ9H5X1 160 aa18.16■□□□□ 0.5
CDCP1-201ENST00000296129 SMYD3Q9H7B4 428 aa18.16■□□□□ 0.5
CDCP1-201ENST00000296129 FAM8A1Q9UBU6 413 aa18.16■□□□□ 0.5
CDCP1-201ENST00000296129 MORC2Q9Y6X9 1032 aaPredicted RBP18.16■□□□□ 0.5
CDCP1-201ENST00000296129 P4HA2O15460 535 aa18.16■□□□□ 0.5
CDCP1-201ENST00000296129 CETPP11597 493 aa18.16■□□□□ 0.5
CDCP1-201ENST00000296129 GTF2H1P32780 548 aa18.16■□□□□ 0.5
CDCP1-201ENST00000296129 ZNF235Q14590 738 aa18.16■□□□□ 0.5
CDCP1-201ENST00000296129 RDM1Q8NG50 284 aa18.16■□□□□ 0.5
CDCP1-201ENST00000296129 ERGIC2Q96RQ1 377 aa18.16■□□□□ 0.5
CDCP1-201ENST00000296129 TARS2Q9BW92 718 aaKnown RBP18.16■□□□□ 0.5
CDCP1-201ENST00000296129 TRIM15Q9C019 465 aa18.16■□□□□ 0.5
CDCP1-201ENST00000296129 SUDS3Q9H7L9 328 aaPredicted RBP18.16■□□□□ 0.5
CDCP1-201ENST00000296129 PCDHB2Q9Y5E7 798 aa18.16■□□□□ 0.5
CDCP1-201ENST00000296129 DIAPH2O60879 1101 aa18.16■□□□□ 0.5
CDCP1-201ENST00000296129 GUCY1A3Q02108 690 aa18.16■□□□□ 0.5
CDCP1-201ENST00000296129 STAT4Q14765 748 aa18.16■□□□□ 0.5
CDCP1-201ENST00000296129 ACCSLQ4AC99 568 aa18.16■□□□□ 0.5
CDCP1-201ENST00000296129 OR6P1Q8NGX9 317 aa18.16■□□□□ 0.5
CDCP1-201ENST00000296129 UPF3AQ9H1J1 476 aaKnown RBP18.16■□□□□ 0.5
CDCP1-201ENST00000296129 MOSPD1Q9UJG1 213 aa18.16■□□□□ 0.5
CDCP1-201ENST00000296129 SMIM24O75264 130 aa18.16■□□□□ 0.5
CDCP1-201ENST00000296129 HSD17B4P51659 736 aa18.16■□□□□ 0.5
CDCP1-201ENST00000296129 ARFIP2P53365 341 aa18.16■□□□□ 0.5
CDCP1-201ENST00000296129 SESN2P58004 480 aaPredicted RBP18.16■□□□□ 0.5
CDCP1-201ENST00000296129 MKRN4PQ13434 485 aaPredicted RBP18.16■□□□□ 0.5
CDCP1-201ENST00000296129 ANKRD13AQ8IZ07 590 aa18.16■□□□□ 0.5
CDCP1-201ENST00000296129 UBA6A0AVT1 1052 aaPredicted RBP18.15■□□□□ 0.5
CDCP1-201ENST00000296129 TYK2P29597 1187 aa18.15■□□□□ 0.5
CDCP1-201ENST00000296129 GPAT2Q6NUI2 795 aa18.15■□□□□ 0.5
CDCP1-201ENST00000296129 ANGPTL8Q6UXH0 198 aa18.15■□□□□ 0.5
CDCP1-201ENST00000296129 SCFD2Q8WU76 684 aa18.15■□□□□ 0.5
CDCP1-201ENST00000296129 ZFYVE28Q9HCC9 887 aa18.15■□□□□ 0.5
CDCP1-201ENST00000296129 PRMT7Q9NVM4 692 aaPredicted RBP18.15■□□□□ 0.5
CDCP1-201ENST00000296129 TJP2Q9UDY2 1190 aa18.15■□□□□ 0.5
CDCP1-201ENST00000296129 HSPA9P38646 679 aaKnown RBP18.15■□□□□ 0.5
CDCP1-201ENST00000296129 UBA3Q8TBC4 463 aa18.15■□□□□ 0.5
CDCP1-201ENST00000296129 CHORDC1Q9UHD1 332 aaPredicted RBP18.15■□□□□ 0.5
CDCP1-201ENST00000296129 RPS6KA5O75582 802 aa18.15■□□□□ 0.5
CDCP1-201ENST00000296129 CD4P01730 458 aa18.15■□□□□ 0.5
CDCP1-201ENST00000296129 DGKDQ16760 1214 aa18.15■□□□□ 0.5
CDCP1-201ENST00000296129 SYN2Q92777 582 aaPredicted RBP18.15■□□□□ 0.5
CDCP1-201ENST00000296129 CLMNQ96JQ2 1002 aa18.15■□□□□ 0.5
CDCP1-201ENST00000296129 MED15Q96RN5 788 aa18.15■□□□□ 0.5
CDCP1-201ENST00000296129 NPTXRO95502 500 aa18.15■□□□□ 0.5
CDCP1-201ENST00000296129 ARP10275 920 aa18.15■□□□□ 0.5
CDCP1-201ENST00000296129 CYP2C9P11712 490 aa18.15■□□□□ 0.5
CDCP1-201ENST00000296129 BRD2P25440 801 aaKnown RBP18.15■□□□□ 0.5
CDCP1-201ENST00000296129 GOLGA7BQ2TAP0 167 aa18.15■□□□□ 0.5
CDCP1-201ENST00000296129 TAS2R42Q7RTR8 314 aa18.15■□□□□ 0.5
CDCP1-201ENST00000296129 LRRC37BQ96QE4 947 aa18.15■□□□□ 0.5
CDCP1-201ENST00000296129 NT5C1AQ9BXI3 368 aa18.15■□□□□ 0.5
CDCP1-201ENST00000296129 CASP7P55210 303 aa18.15■□□□□ 0.5
CDCP1-201ENST00000296129 VEPH1Q14D04 833 aa18.15■□□□□ 0.5
CDCP1-201ENST00000296129 GMCL1P1Q8NEA9 526 aa18.15■□□□□ 0.5
CDCP1-201ENST00000296129 NIF3L1Q9GZT8 377 aa18.15■□□□□ 0.5
CDCP1-201ENST00000296129 TRIM33Q9UPN9 1127 aa18.15■□□□□ 0.5
CDCP1-201ENST00000296129 FAM205AQ6ZU69 1335 aa18.15■□□□□ 0.5
CDCP1-201ENST00000296129 DDTLA6NHG4 134 aaPredicted RBP18.14■□□□□ 0.5
CDCP1-201ENST00000296129 RAD51CO43502 376 aa18.14■□□□□ 0.5
CDCP1-201ENST00000296129 ITGA4P13612 1032 aa18.14■□□□□ 0.5
CDCP1-201ENST00000296129 HADHAP40939 763 aa18.14■□□□□ 0.5
CDCP1-201ENST00000296129 ADAM33Q9BZ11 813 aa18.14■□□□□ 0.5
CDCP1-201ENST00000296129 GPRC5CQ9NQ84 441 aa18.14■□□□□ 0.5
CDCP1-201ENST00000296129 TRAPPC3O43617 180 aa18.14■□□□□ 0.49
CDCP1-201ENST00000296129 TADA2AO75478 443 aa18.14■□□□□ 0.49
CDCP1-201ENST00000296129 ATP5HO75947 161 aa18.14■□□□□ 0.49
CDCP1-201ENST00000296129 PLEKP08567 350 aaPredicted RBP18.14■□□□□ 0.49
CDCP1-201ENST00000296129 KLRC1P26715 233 aa18.14■□□□□ 0.49
CDCP1-201ENST00000296129 SREBF1P36956 1147 aa18.14■□□□□ 0.49
CDCP1-201ENST00000296129 AGAP3Q96P47 875 aa18.14■□□□□ 0.49
CDCP1-201ENST00000296129 PRMT1Q99873 361 aaKnown RBP18.14■□□□□ 0.49
CDCP1-201ENST00000296129 GOLPH3Q9H4A6 298 aa18.14■□□□□ 0.49
CDCP1-201ENST00000296129 ALG13Q9NP73 1137 aaKnown RBP18.14■□□□□ 0.49
CDCP1-201ENST00000296129 SKIP12755 728 aa18.14■□□□□ 0.49
CDCP1-201ENST00000296129 GRAMD1BQ3KR37 738 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms