RNA–Protein interactions for RNA: ENST00000267970.8

TSPAN3-201, Transcript of tetraspanin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN3, Length 6,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-201ENST00000267970 PTK7Q13308 1070 aa17.65■□□□□ 0.42
TSPAN3-201ENST00000267970 CCDC103Q8IW40 242 aa17.65■□□□□ 0.42
TSPAN3-201ENST00000267970 PROM2Q8N271 834 aa17.65■□□□□ 0.42
TSPAN3-201ENST00000267970 UBA3Q8TBC4 463 aa17.65■□□□□ 0.42
TSPAN3-201ENST00000267970 ZBTB10Q96DT7 871 aa17.65■□□□□ 0.42
TSPAN3-201ENST00000267970 MAGEB5Q9BZ81 275 aa17.65■□□□□ 0.42
TSPAN3-201ENST00000267970 ZC2HC1CQ53FD0 456 aaPredicted RBP17.65■□□□□ 0.42
TSPAN3-201ENST00000267970 BTBD8Q5XKL5 378 aa17.65■□□□□ 0.42
TSPAN3-201ENST00000267970 SLC40A1Q9NP59 571 aa17.65■□□□□ 0.42
TSPAN3-201ENST00000267970 NFKBIL1Q9UBC1 381 aaPredicted RBP17.65■□□□□ 0.42
TSPAN3-201ENST00000267970 ASAP2O43150 1006 aa17.65■□□□□ 0.42
TSPAN3-201ENST00000267970 INPP5AQ14642 412 aa17.65■□□□□ 0.42
TSPAN3-201ENST00000267970 RC3H1Q5TC82 1133 aaKnown RBP17.65■□□□□ 0.42
TSPAN3-201ENST00000267970 TMEM179Q6ZVK1 233 aa17.65■□□□□ 0.42
TSPAN3-201ENST00000267970 MFN1Q8IWA4 741 aa17.65■□□□□ 0.42
TSPAN3-201ENST00000267970 ZC3H7BQ9UGR2 993 aaKnown RBP17.65■□□□□ 0.42
TSPAN3-201ENST00000267970 CYTH3O43739 400 aa17.65■□□□□ 0.42
TSPAN3-201ENST00000267970 CCZ1BP86790 482 aa17.65■□□□□ 0.42
TSPAN3-201ENST00000267970 CCZ1P86791 482 aaPredicted RBP17.65■□□□□ 0.42
TSPAN3-201ENST00000267970 ORC1Q13415 861 aa17.65■□□□□ 0.42
TSPAN3-201ENST00000267970 QRICH1Q2TAL8 776 aa17.65■□□□□ 0.42
TSPAN3-201ENST00000267970 C2CD6Q53TS8 623 aa17.65■□□□□ 0.42
TSPAN3-201ENST00000267970 NLGN1Q8N2Q7 840 aa17.65■□□□□ 0.42
TSPAN3-201ENST00000267970 TMEM120BA0PK00 339 aa17.65■□□□□ 0.42
TSPAN3-201ENST00000267970 DPYSL4O14531 572 aa17.65■□□□□ 0.42
TSPAN3-201ENST00000267970 DLGAP3O95886 979 aa17.65■□□□□ 0.42
TSPAN3-201ENST00000267970 HSPA1AP0DMV8 641 aaKnown RBP17.65■□□□□ 0.42
TSPAN3-201ENST00000267970 HSPA1BP0DMV9 641 aaKnown RBP17.65■□□□□ 0.42
TSPAN3-201ENST00000267970 KLC1Q07866 573 aa17.65■□□□□ 0.42
TSPAN3-201ENST00000267970 CHI3L2Q15782 390 aa17.65■□□□□ 0.42
TSPAN3-201ENST00000267970 KYNUQ16719 465 aa17.65■□□□□ 0.42
TSPAN3-201ENST00000267970 MRPL1Q9BYD6 325 aaKnown RBP17.65■□□□□ 0.42
TSPAN3-201ENST00000267970 PLEKHA5Q9HAU0 1116 aa17.65■□□□□ 0.42
TSPAN3-201ENST00000267970 TMA7Q9Y2S6 64 aaKnown RBP17.65■□□□□ 0.42
TSPAN3-201ENST00000267970 S100A5P33763 92 aa17.64■□□□□ 0.41
TSPAN3-201ENST00000267970 GALCP54803 685 aa17.64■□□□□ 0.41
TSPAN3-201ENST00000267970 BPIFA3Q9BQP9 254 aa17.64■□□□□ 0.41
TSPAN3-201ENST00000267970 QARSP47897 775 aaKnown RBP17.64■□□□□ 0.41
TSPAN3-201ENST00000267970 TRIM25Q14258 630 aaKnown RBP17.64■□□□□ 0.41
TSPAN3-201ENST00000267970 C3orf62Q6ZUJ4 267 aa17.64■□□□□ 0.41
TSPAN3-201ENST00000267970 TRPM8Q7Z2W7 1104 aa17.64■□□□□ 0.41
TSPAN3-201ENST00000267970 SNX31Q8N9S9 440 aa17.64■□□□□ 0.41
TSPAN3-201ENST00000267970 PABPC5Q96DU9 382 aaKnown RBP17.64■□□□□ 0.41
TSPAN3-201ENST00000267970 DDX56Q9NY93 547 aaKnown RBP17.64■□□□□ 0.41
TSPAN3-201ENST00000267970 CD274Q9NZQ7 290 aa17.64■□□□□ 0.41
TSPAN3-201ENST00000267970 COPG1Q9Y678 874 aaKnown RBP17.64■□□□□ 0.41
TSPAN3-201ENST00000267970 GPSM2P81274 684 aa17.64■□□□□ 0.41
TSPAN3-201ENST00000267970 WDR72Q3MJ13 1102 aa17.64■□□□□ 0.41
TSPAN3-201ENST00000267970 FASTKD5Q7L8L6 764 aaKnown RBP17.64■□□□□ 0.41
TSPAN3-201ENST00000267970 ARHGAP18Q8N392 663 aa17.64■□□□□ 0.41
TSPAN3-201ENST00000267970 RNF149Q8NC42 400 aa17.64■□□□□ 0.41
TSPAN3-201ENST00000267970 DNAJC9Q8WXX5 260 aa17.64■□□□□ 0.41
TSPAN3-201ENST00000267970 AGBL1Q96MI9 1066 aa17.64■□□□□ 0.41
TSPAN3-201ENST00000267970 RNF146Q9NTX7 359 aa17.64■□□□□ 0.41
TSPAN3-201ENST00000267970 PLXNC1O60486 1568 aa17.64■□□□□ 0.41
TSPAN3-201ENST00000267970 SKAP2O75563 359 aaPredicted RBP17.64■□□□□ 0.41
TSPAN3-201ENST00000267970 LSP1P33241 339 aa17.64■□□□□ 0.41
TSPAN3-201ENST00000267970 TBC1D23Q9NUY8 699 aa17.64■□□□□ 0.41
TSPAN3-201ENST00000267970 STMN3Q9NZ72 180 aa17.64■□□□□ 0.41
TSPAN3-201ENST00000267970 C5orf58C9J3I9 102 aa17.64■□□□□ 0.41
TSPAN3-201ENST00000267970 GRAPQ13588 217 aa17.64■□□□□ 0.41
TSPAN3-201ENST00000267970 SRBD1Q8N5C6 995 aaKnown RBP17.64■□□□□ 0.41
TSPAN3-201ENST00000267970 GRAPLQ8TC17 118 aaPredicted RBP17.64■□□□□ 0.41
TSPAN3-201ENST00000267970 DCAF4Q8WV16 495 aa17.64■□□□□ 0.41
TSPAN3-201ENST00000267970 WNK4Q96J92 1243 aa17.64■□□□□ 0.41
TSPAN3-201ENST00000267970 NFKBIAP25963 317 aa17.63■□□□□ 0.41
TSPAN3-201ENST00000267970 SERPINB10P48595 397 aa17.63■□□□□ 0.41
TSPAN3-201ENST00000267970 WASHC5Q12768 1159 aa17.63■□□□□ 0.41
TSPAN3-201ENST00000267970 MB21D2Q8IYB1 491 aaPredicted RBP17.63■□□□□ 0.41
TSPAN3-201ENST00000267970 PHF21AQ96BD5 680 aa17.63■□□□□ 0.41
TSPAN3-201ENST00000267970 SENP7Q9BQF6 1050 aa17.63■□□□□ 0.41
TSPAN3-201ENST00000267970 UNKQ9C0B0 810 aaKnown RBP17.63■□□□□ 0.41
TSPAN3-201ENST00000267970 NCF1BA6NI72 391 aaPredicted RBP17.63■□□□□ 0.41
TSPAN3-201ENST00000267970 NCF1CA8MVU1 366 aaPredicted RBP17.63■□□□□ 0.41
TSPAN3-201ENST00000267970 RTN2O75298 545 aa17.63■□□□□ 0.41
TSPAN3-201ENST00000267970 SRP72O76094 671 aaKnown RBP17.63■□□□□ 0.41
TSPAN3-201ENST00000267970 NCF1P14598 390 aaPredicted RBP17.63■□□□□ 0.41
TSPAN3-201ENST00000267970 BRD2P25440 801 aaKnown RBP17.63■□□□□ 0.41
TSPAN3-201ENST00000267970 SCARF1Q14162 830 aa17.63■□□□□ 0.41
TSPAN3-201ENST00000267970 CACNA2D2Q9NY47 1150 aa17.63■□□□□ 0.41
TSPAN3-201ENST00000267970 STAP1Q9ULZ2 295 aa17.63■□□□□ 0.41
TSPAN3-201ENST00000267970 HMGXB3Q12766 1538 aa17.63■□□□□ 0.41
TSPAN3-201ENST00000267970 DNAJC3Q13217 504 aa17.63■□□□□ 0.41
TSPAN3-201ENST00000267970 ELMOD1Q8N336 334 aa17.63■□□□□ 0.41
TSPAN3-201ENST00000267970 NOA1Q8NC60 698 aaKnown RBP17.63■□□□□ 0.41
TSPAN3-201ENST00000267970 PTPRN2Q92932 1015 aa17.63■□□□□ 0.41
TSPAN3-201ENST00000267970 FHOD1Q9Y613 1164 aa17.63■□□□□ 0.41
TSPAN3-201ENST00000267970 SERPINB5P36952 375 aa17.63■□□□□ 0.41
TSPAN3-201ENST00000267970 ATL2Q8NHH9 583 aa17.63■□□□□ 0.41
TSPAN3-201ENST00000267970 XPO6Q96QU8 1125 aaKnown RBP17.63■□□□□ 0.41
TSPAN3-201ENST00000267970 TOPORSQ9NS56 1045 aaPredicted RBP17.63■□□□□ 0.41
TSPAN3-201ENST00000267970 PITPNM2Q9BZ72 1349 aa17.63■□□□□ 0.41
TSPAN3-201ENST00000267970 SPP2Q13103 211 aa17.63■□□□□ 0.41
TSPAN3-201ENST00000267970 ZNF579Q8NAF0 562 aaKnown RBP17.63■□□□□ 0.41
TSPAN3-201ENST00000267970 MRPL4Q9BYD3 311 aaKnown RBP17.63■□□□□ 0.41
TSPAN3-201ENST00000267970 NDEL1Q9GZM8 345 aa17.63■□□□□ 0.41
TSPAN3-201ENST00000267970 MYO3BQ8WXR4 1341 aa17.62■□□□□ 0.41
TSPAN3-201ENST00000267970 PHF2O75151 1096 aa17.62■□□□□ 0.41
TSPAN3-201ENST00000267970 CTSHP09668 335 aa17.62■□□□□ 0.41
TSPAN3-201ENST00000267970 AKT1P31749 480 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms