RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 DGAT1O75907 488 aa16.24■□□□□ 0.19
DDX56-201ENST00000258772 CYP1A1P04798 512 aaPredicted RBP16.24■□□□□ 0.19
DDX56-201ENST00000258772 NR3C2P08235 984 aa16.24■□□□□ 0.19
DDX56-201ENST00000258772 CREB1P16220 341 aa16.24■□□□□ 0.19
DDX56-201ENST00000258772 NSFP46459 744 aaKnown RBP16.24■□□□□ 0.19
DDX56-201ENST00000258772 RTP1P59025 263 aa16.24■□□□□ 0.19
DDX56-201ENST00000258772 BPIFB4P59827 614 aa16.24■□□□□ 0.19
DDX56-201ENST00000258772 CAV1Q03135 178 aa16.24■□□□□ 0.19
DDX56-201ENST00000258772 CENPCQ03188 943 aa16.24■□□□□ 0.19
DDX56-201ENST00000258772 BAATQ14032 418 aaPredicted RBP16.24■□□□□ 0.19
DDX56-201ENST00000258772 LMBRD2Q68DH5 695 aaPredicted RBP16.24■□□□□ 0.19
DDX56-201ENST00000258772 XRRA1Q6P2D8 792 aa16.24■□□□□ 0.19
DDX56-201ENST00000258772 MCPH1Q8NEM0 835 aa16.24■□□□□ 0.19
DDX56-201ENST00000258772 ATP6V0A1Q93050 837 aa16.24■□□□□ 0.19
DDX56-201ENST00000258772 GPRASP2Q96D09 838 aa16.24■□□□□ 0.19
DDX56-201ENST00000258772 TRAIPQ9BWF2 469 aa16.24■□□□□ 0.19
DDX56-201ENST00000258772 NSRP1Q9H0G5 558 aaKnown RBP16.24■□□□□ 0.19
DDX56-201ENST00000258772 ARID2Q68CP9 1835 aa16.24■□□□□ 0.19
DDX56-201ENST00000258772 MAFGO15525 162 aa16.23■□□□□ 0.19
DDX56-201ENST00000258772 PROSCO94903 275 aa16.23■□□□□ 0.19
DDX56-201ENST00000258772 CCND2P30279 289 aa16.23■□□□□ 0.19
DDX56-201ENST00000258772 ADCY8P40145 1251 aa16.23■□□□□ 0.19
DDX56-201ENST00000258772 CLDN10P78369 228 aa16.23■□□□□ 0.19
DDX56-201ENST00000258772 PTP4A2Q12974 167 aa16.23■□□□□ 0.19
DDX56-201ENST00000258772 WDR44Q5JSH3 913 aa16.23■□□□□ 0.19
DDX56-201ENST00000258772 SWSAP1Q6NVH7 229 aa16.23■□□□□ 0.19
DDX56-201ENST00000258772 DNAJC17Q9NVM6 304 aaKnown RBP16.23■□□□□ 0.19
DDX56-201ENST00000258772 ARHGAP28Q9P2N2 729 aa16.23■□□□□ 0.19
DDX56-201ENST00000258772 ANAPC5Q9UJX4 755 aa16.23■□□□□ 0.19
DDX56-201ENST00000258772 RIPK3Q9Y572 518 aa16.23■□□□□ 0.19
DDX56-201ENST00000258772 TMEM120BA0PK00 339 aa16.23■□□□□ 0.19
DDX56-201ENST00000258772 EXTL3O43909 919 aa16.23■□□□□ 0.19
DDX56-201ENST00000258772 ATF2P15336 505 aa16.23■□□□□ 0.19
DDX56-201ENST00000258772 ATP5DP30049 168 aa16.23■□□□□ 0.19
DDX56-201ENST00000258772 KLF1Q13351 362 aaPredicted RBP16.23■□□□□ 0.19
DDX56-201ENST00000258772 LRRC14Q15048 493 aa16.23■□□□□ 0.19
DDX56-201ENST00000258772 ZACNQ401N2 412 aa16.23■□□□□ 0.19
DDX56-201ENST00000258772 DAB2IPQ5VWQ8 1189 aa16.23■□□□□ 0.19
DDX56-201ENST00000258772 VSTM1Q6UX27 236 aa16.23■□□□□ 0.19
DDX56-201ENST00000258772 MON1BQ7L1V2 547 aa16.23■□□□□ 0.19
DDX56-201ENST00000258772 TRPM8Q7Z2W7 1104 aa16.23■□□□□ 0.19
DDX56-201ENST00000258772 DYDC1Q8WWB3 177 aa16.23■□□□□ 0.19
DDX56-201ENST00000258772 ZKSCAN4Q969J2 545 aaPredicted RBP16.23■□□□□ 0.19
DDX56-201ENST00000258772 HEMGNQ9BXL5 484 aa16.23■□□□□ 0.19
DDX56-201ENST00000258772 RPAP3Q9H6T3 665 aaPredicted RBP16.23■□□□□ 0.19
DDX56-201ENST00000258772 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.23■□□□□ 0.19
DDX56-201ENST00000258772 ZNRF3Q9ULT6 936 aa16.23■□□□□ 0.19
DDX56-201ENST00000258772 NEU2Q9Y3R4 380 aa16.23■□□□□ 0.19
DDX56-201ENST00000258772 DOCK5Q9H7D0 1870 aa16.23■□□□□ 0.19
DDX56-201ENST00000258772 VWA5AO00534 786 aa16.22■□□□□ 0.19
DDX56-201ENST00000258772 SNX3O60493 162 aa16.22■□□□□ 0.19
DDX56-201ENST00000258772 DKC1O60832 514 aaKnown RBP eCLIP16.22■□□□□ 0.19
DDX56-201ENST00000258772 HLA-DRAP01903 254 aa16.22■□□□□ 0.19
DDX56-201ENST00000258772 C4BPAP04003 597 aaKnown RBP16.22■□□□□ 0.19
DDX56-201ENST00000258772 GSTA1P08263 222 aa16.22■□□□□ 0.19
DDX56-201ENST00000258772 RALAP11233 206 aa16.22■□□□□ 0.19
DDX56-201ENST00000258772 KCNA2P16389 499 aa16.22■□□□□ 0.19
DDX56-201ENST00000258772 TNNI1P19237 187 aa16.22■□□□□ 0.19
DDX56-201ENST00000258772 UMODL1Q5DID0 1318 aa16.22■□□□□ 0.19
DDX56-201ENST00000258772 CCDC50Q8IVM0 306 aa16.22■□□□□ 0.19
DDX56-201ENST00000258772 MGARPQ8TDB4 240 aa16.22■□□□□ 0.19
DDX56-201ENST00000258772 IFT74Q96LB3 600 aa16.22■□□□□ 0.19
DDX56-201ENST00000258772 SCLT1Q96NL6 688 aa16.22■□□□□ 0.19
DDX56-201ENST00000258772 FNBP1Q96RU3 617 aa16.22■□□□□ 0.19
DDX56-201ENST00000258772 KIAA1586Q9HCI6 787 aa16.22■□□□□ 0.19
DDX56-201ENST00000258772 SLC12A4Q9UP95 1085 aa16.22■□□□□ 0.19
DDX56-201ENST00000258772 TELO2Q9Y4R8 837 aa16.22■□□□□ 0.19
DDX56-201ENST00000258772 MYH9P35579 1960 aaKnown RBP16.22■□□□□ 0.19
DDX56-201ENST00000258772 O00370 1275 aa16.22■□□□□ 0.19
DDX56-201ENST00000258772 THAP12O43422 761 aa16.22■□□□□ 0.19
DDX56-201ENST00000258772 SORBS3O60504 671 aa16.22■□□□□ 0.19
DDX56-201ENST00000258772 TCEA3O75764 348 aa16.22■□□□□ 0.19
DDX56-201ENST00000258772 PSAPP07602 524 aa16.22■□□□□ 0.19
DDX56-201ENST00000258772 MTMR2Q13614 643 aa16.22■□□□□ 0.19
DDX56-201ENST00000258772 PSMD6Q15008 389 aa16.22■□□□□ 0.19
DDX56-201ENST00000258772 SNCBQ16143 134 aa16.22■□□□□ 0.19
DDX56-201ENST00000258772 CCNG2Q16589 344 aa16.22■□□□□ 0.19
DDX56-201ENST00000258772 WNK4Q96J92 1243 aa16.22■□□□□ 0.19
DDX56-201ENST00000258772 TEPSINQ96N21 525 aa16.22■□□□□ 0.19
DDX56-201ENST00000258772 CYP26B1Q9NR63 512 aa16.22■□□□□ 0.19
DDX56-201ENST00000258772 RNF146Q9NTX7 359 aa16.22■□□□□ 0.19
DDX56-201ENST00000258772 CTNNAL1Q9UBT7 734 aa16.22■□□□□ 0.19
DDX56-201ENST00000258772 PSTPIP1O43586 416 aa16.21■□□□□ 0.19
DDX56-201ENST00000258772 CFHP08603 1231 aa16.21■□□□□ 0.19
DDX56-201ENST00000258772 ACO1P21399 889 aaKnown RBP16.21■□□□□ 0.19
DDX56-201ENST00000258772 VPS41P49754 854 aa16.21■□□□□ 0.19
DDX56-201ENST00000258772 LIG4P49917 911 aa16.21■□□□□ 0.19
DDX56-201ENST00000258772 WNT7BP56706 349 aa16.21■□□□□ 0.19
DDX56-201ENST00000258772 TDRD10Q5VZ19 366 aaKnown RBP16.21■□□□□ 0.19
DDX56-201ENST00000258772 SPOPLQ6IQ16 392 aa16.21■□□□□ 0.19
DDX56-201ENST00000258772 CCDC91Q7Z6B0 441 aa16.21■□□□□ 0.19
DDX56-201ENST00000258772 RHOT1Q8IXI2 618 aa16.21■□□□□ 0.19
DDX56-201ENST00000258772 ATG4CQ96DT6 458 aa16.21■□□□□ 0.19
DDX56-201ENST00000258772 PWWP2AQ96N64 755 aa16.21■□□□□ 0.19
DDX56-201ENST00000258772 POLR3FQ9H1D9 316 aaPredicted RBP16.21■□□□□ 0.19
DDX56-201ENST00000258772 YY1AP1Q9H869 796 aa16.21■□□□□ 0.19
DDX56-201ENST00000258772 ATP6V0A4Q9HBG4 840 aa16.21■□□□□ 0.19
DDX56-201ENST00000258772 NINJ2Q9NZG7 142 aa16.21■□□□□ 0.19
DDX56-201ENST00000258772 SEPT9Q9UHD8 586 aaPredicted RBP16.21■□□□□ 0.19
DDX56-201ENST00000258772 FOXO6A8MYZ6 492 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms